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Hoppe, Clara Jule Marie; Holtz, Lena-Maria; Trimborn, Scarlett; Rost, Björn (2015): Ocean acidification decreases the light-use efficiency in an Antarctic diatom under dynamic but not constant light [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.847795

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Keyword(s):
Antarctic; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Chaetoceros debilis; Chromista; Growth/Morphology; Laboratory experiment; Laboratory strains; Light; Ochrophyta; Pelagos; Phytoplankton; Primary production/Photosynthesis; Single species
Related to:
Hoppe, Clara Jule Marie; Holtz, Lena-Maria; Trimborn, Scarlett; Rost, Björn (2015): Ocean acidification decreases the light-use efficiency in an Antarctic diatom under dynamic but not constant light. New Phytologist, 207(1), 159-171, https://doi.org/10.1111/nph.13334
Original version:
Hoppe, Clara Jule Marie; Holtz, Lena-Maria; Trimborn, Scarlett; Rost, Björn (2015): Ocean acidification decreases the light-use efficiency in an Antarctic diatom under dynamic but not constant light, link to supplementary data. PANGAEA, https://doi.org/10.1594/PANGAEA.842808
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse (2015): seacarb: seawater carbonate chemistry with R. R package version 3.0.6. https://cran.r-project.org/package=seacarb
Project(s):
Ocean Acidification International Coordination Centre (OA-ICC)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2015-07-03.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1SpeciesSpeciesHoppe, Clara Jule Marie
2Light modeL modeHoppe, Clara Jule Marie
3Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmHoppe, Clara Jule Marietreatment
4ReplicateReplHoppe, Clara Jule Marie
5Growth rateµ1/dayHoppe, Clara Jule Marie
6Chlorophyll a per cellChl a/cellpg/#Hoppe, Clara Jule Marie
7Carbon, organic, particulate, per cellPOC/cellpg/#Hoppe, Clara Jule Marie
8Nitrogen, organic, particulate, per cellPON/cellpg/#Hoppe, Clara Jule Marie
9Biogenic silica, per cellbSiO2/cellµg/#Hoppe, Clara Jule Marie
10Chlorophyll a production per cellChl a prod/cellpg/#/dayHoppe, Clara Jule Marie
11Particulate organic carbon production per cellPOC prod/cellpg/#/dayHoppe, Clara Jule Marie
12Production of particulate organic nitrogenPON prodpg/#/dayHoppe, Clara Jule Marie
13Biogenic silica production per cellbSiO2 prod/cellpg/#/dayHoppe, Clara Jule Marie
14Carbon, organic, particulate/Nitrogen, organic, particulate ratioPOC/PONHoppe, Clara Jule Marie
15Chlorophyll a/particulate organic carbon ratioChl a/POCHoppe, Clara Jule Marie
16Non photochemical quenchingNPQHoppe, Clara Jule Marieat 490 at µE/m**2/s
17Non photochemical quenchingNPQHoppe, Clara Jule Mariemaximal
18Electron transport rate per chlorophyll aETR/Chl aµmol e/µmol/minHoppe, Clara Jule Marie
19Light saturation pointIkµmol/m2/sHoppe, Clara Jule Marie
20Photosynthetic efficiency per chlorophyll aalpha/Chl amol e/(E/m2)/molHoppe, Clara Jule Marie
21Electron transport rate per chlorophyll a per dayETR/Chl amol e/mol/dayHoppe, Clara Jule Marie
22Net primary production of carbon per chlorophyll aNPP C/Chl amol/mol/dayHoppe, Clara Jule Marie
23Energy transfer efficiency per carbonphi_eCmol e/molHoppe, Clara Jule Marie
24SalinitySalHoppe, Clara Jule Marie
25Temperature, waterTemp°CHoppe, Clara Jule Marie
26Carbon, inorganic, dissolvedDICµmol/kgHoppe, Clara Jule MarieCoulometric titration
27Carbon, inorganic, dissolved, standard deviationDIC std dev±Hoppe, Clara Jule MarieCoulometric titration
28Alkalinity, totalATµmol/kgHoppe, Clara Jule MariePotentiometric titration
29Alkalinity, total, standard deviationAT std dev±Hoppe, Clara Jule MariePotentiometric titration
30pHpHHoppe, Clara Jule MariePotentiometrictotal scale
31pH, standard deviationpH std dev±Hoppe, Clara Jule MariePotentiometrictotal scale
32Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmHoppe, Clara Jule MarieCalculated using CO2SYS
33Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Hoppe, Clara Jule MarieCalculated using CO2SYS
34Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
38Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
780 data points

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