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Bale, Nicole Jane; Villanueva, Laura; Fan, Haoxin; Stal, Lucas J; Hopmans, Ellen C; Schouten, Stefan; Sinninghe Damsté, Jaap S (2014): Occurrence and activity of anammox bacteria in surface sediments of the southern North Sea [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.832170, Supplement to: Bale, NJ et al. (2014): Occurrence and activity of anammox bacteria in surface sediments of the southern North Sea. FEMS Microbiology Ecology, 89(1), 99-110, https://doi.org/10.1111/1574-6941.12338

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Abstract:
We investigated the occurrence and activity of anaerobic ammonia oxidation (anammox) bacteria in sandy and muddy sand sediments of the southern North Sea. The presence of anammox bacteria was established through the detection of specific phosphocholine-monoether ladderane lipids, 16S rRNA gene, and hydrazine synthase (hzsA) genes. Anammox activity was measured in intact sediment cores (in situ rate) and in sediment slurries (potential rate) as the rate of N2 evolution from 15N-labeled substrates and compared to the transcriptional activity of genes of anammox bacteria. The contribution of anammox to N2 production ranged between 0% and 29%. The potential rate of anammox agreed well with the abundance of anammox bacteria 16S rRNA and hzsA gene copies and the transcriptional activity of the anammox bacteria 16S rRNA gene. We found a higher abundance and activity of anammox bacteria in sediments with higher organic carbon content and also higher activity in summer than in winter. The abundance of anammox bacteria and their potential anammox rates were similar to those reported for other marine coastal sediments, suggesting that potentially they are important contributors to the nitrogen cycle in sandy sediments of shallow continental shelf areas.
Coverage:
Median Latitude: 54.117000 * Median Longitude: 4.349250 * South-bound Latitude: 53.401000 * West-bound Longitude: 3.150000 * North-bound Latitude: 55.170000 * East-bound Longitude: 5.150000
Date/Time Start: 2010-11-24T00:00:00 * Date/Time End: 2011-08-26T00:00:00
Minimum DEPTH, sediment/rock: m * Maximum DEPTH, sediment/rock: m
Event(s):
64PE327_1-MUC * Latitude: 55.170000 * Longitude: 3.150000 * Date/Time: 2010-11-24T00:00:00 * Elevation: -27.0 m * Location: North Sea * Campaign: 64PE327 (NICYCLE/FOKUZ) * Basis: Pelagia * Method/Device: MultiCorer (MUC)
64PE327_4-MUC * Latitude: 54.130000 * Longitude: 4.330000 * Date/Time: 2010-11-26T00:00:00 * Elevation: -45.0 m * Location: North Sea * Campaign: 64PE327 (NICYCLE/FOKUZ) * Basis: Pelagia * Method/Device: MultiCorer (MUC)
64PE327_6-MUC * Latitude: 53.767000 * Longitude: 4.767000 * Date/Time: 2010-11-27T00:00:00 * Elevation: -33.0 m * Location: North Sea * Campaign: 64PE327 (NICYCLE/FOKUZ) * Basis: Pelagia * Method/Device: MultiCorer (MUC)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEvent
2Cruise/expeditionExpeditionBale, Nicole Jane
3Station labelStationBale, Nicole Jane
4DEPTH, sediment/rockDepth sedmGeocode
5Latitude of eventLatitude
6Longitude of eventLongitude
7Elevation of eventElevationm
8Date/Time of eventDate/Time
9Ammonium[NH4]+µmol/lBale, Nicole Jane
10Nitrate[NO3]-µmol/lBale, Nicole Jane
11Nitrite[NO2]-µmol/lBale, Nicole Jane
12Phosphate[PO4]3-µmol/lBale, Nicole Jane
13SilicateSi(OH)4µmol/lBale, Nicole Jane
14Median, grain sizeD50µmBale, Nicole Jane
15Size fraction < 0.063 mm, mud, silt+clay<63 µm%Bale, Nicole Jane
16Size fraction 0.125-0.063 mm, 3.0-4.0 phi, very fine sand125-63 µm%Bale, Nicole Jane
17Size fraction 0.250-0.125 mm, 2.0-3.0 phi, fine sand250-125 µm%Bale, Nicole Jane
18Size fraction 0.500-0.250 mm, 1.0-2.0 phi, medium sand500-250 µm%Bale, Nicole Jane
19Carbon, organic, totalTOC%Bale, Nicole Jane
20SalinitySalBale, Nicole Jane
21Anammox 16s rRNAAnammox 16s rRNAgene copies/gBale, Nicole Jane
22Anammox 16s rRNA, standard deviationAnammox 16s rRNA std dev±Bale, Nicole Janegene copies/g
23Anammox 16s rRNAAnammox 16s rRNAgene transcripts/gBale, Nicole Jane
24Anammox 16s rRNA, standard deviationAnammox 16s rRNA std dev±Bale, Nicole Janegene transcripts/g
25Hydrazine synthaseHydrazine Sgene copies/gBale, Nicole Jane
26Hydrazine synthase, standard deviationHydrazine S std dev±Bale, Nicole Jane
27PC-monoetherPC-monoetherng/gBale, Nicole Jane
28PC-monoether, standard deviationPC-monoether std dev±Bale, Nicole Jane
29Anammox rateAnammox rateµmol/m2/dayBale, Nicole Janein situ
30Anammox rate, standard deviationAnammox rate std dev±Bale, Nicole Jane
31Nitrogen production rateN2 prodnmol/cm3/hBale, Nicole Janepotential rate
Size:
364 data points

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