Bale, Nicole Jane; Villanueva, Laura; Fan, Haoxin; Stal, Lucas J; Hopmans, Ellen C; Schouten, Stefan; Sinninghe Damsté, Jaap S (2014): Occurrence and activity of anammox bacteria in surface sediments of the southern North Sea [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.832170, Supplement to: Bale, NJ et al. (2014): Occurrence and activity of anammox bacteria in surface sediments of the southern North Sea. FEMS Microbiology Ecology, 89(1), 99-110, https://doi.org/10.1111/1574-6941.12338
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Abstract:
We investigated the occurrence and activity of anaerobic ammonia oxidation (anammox) bacteria in sandy and muddy sand sediments of the southern North Sea. The presence of anammox bacteria was established through the detection of specific phosphocholine-monoether ladderane lipids, 16S rRNA gene, and hydrazine synthase (hzsA) genes. Anammox activity was measured in intact sediment cores (in situ rate) and in sediment slurries (potential rate) as the rate of N2 evolution from 15N-labeled substrates and compared to the transcriptional activity of genes of anammox bacteria. The contribution of anammox to N2 production ranged between 0% and 29%. The potential rate of anammox agreed well with the abundance of anammox bacteria 16S rRNA and hzsA gene copies and the transcriptional activity of the anammox bacteria 16S rRNA gene. We found a higher abundance and activity of anammox bacteria in sediments with higher organic carbon content and also higher activity in summer than in winter. The abundance of anammox bacteria and their potential anammox rates were similar to those reported for other marine coastal sediments, suggesting that potentially they are important contributors to the nitrogen cycle in sandy sediments of shallow continental shelf areas.
Coverage:
Median Latitude: 54.117000 * Median Longitude: 4.349250 * South-bound Latitude: 53.401000 * West-bound Longitude: 3.150000 * North-bound Latitude: 55.170000 * East-bound Longitude: 5.150000
Date/Time Start: 2010-11-24T00:00:00 * Date/Time End: 2011-08-26T00:00:00
Minimum DEPTH, sediment/rock: 0 m * Maximum DEPTH, sediment/rock: 0 m
Event(s):
64PE327_1-MUC * Latitude: 55.170000 * Longitude: 3.150000 * Date/Time: 2010-11-24T00:00:00 * Elevation: -27.0 m * Location: North Sea * Campaign: 64PE327 (NICYCLE/FOKUZ) * Basis: Pelagia * Method/Device: MultiCorer (MUC)
Parameter(s):
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Size:
364 data points
Data
| 1 Event | 2 Expedition | 3 Station | 4 Depth sed [m] | 5 Latitude | 6 Longitude | 7 Elevation [m] | 8 Date/Time | 9 [NH4]+ [µmol/l] | 10 [NO3]- [µmol/l] | 11 [NO2]- [µmol/l] | 12 [PO4]3- [µmol/l] | 13 Si(OH)4 [µmol/l] | 14 D50 [µm] | 15 <63 µm [%] | 16 125-63 µm [%] | 17 250-125 µm [%] | 18 500-250 µm [%] | 19 TOC [%] | 20 Sal | 21 Anammox 16s rRNA [gene copies/g] | 22 Anammox 16s rRNA std dev [±] (gene copies/g) | 23 Anammox 16s rRNA [gene transcripts/g] | 24 Anammox 16s rRNA std dev [±] (gene transcripts/g) | 25 Hydrazine S [gene copies/g] | 26 Hydrazine S std dev [±] | 27 PC-monoether [ng/g] | 28 PC-monoether std dev [±] | 29 Anammox rate [µmol/m2/day] (in situ) | 30 Anammox rate std dev [±] | 31 N2 prod [nmol/cm3/h] (potential rate) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64PE327_1-MUC | NICYCLE I, 64PE327 | Dogger Bank | 0 | 55.170 | 3.150 | -27 | 2010-11-24 | 2.9 | 5.3 | 0.30 | 1.0 | 0.3 | 210 | 0.0 | 6.4 | 62.6 | 31.0 | 0.03 | 34.6 | 6817.4635 | 2697.0211 | 0.0000 | 0.0000 | 0.0000 | 0.0000 | 0.0808 | 0.015400 | 0.0000 | 0.0000 | 0.00 |
| 64PE327_4-MUC | NICYCLE I, 64PE327 | Oyster Ground | 0 | 54.130 | 4.330 | -45 | 2010-11-26 | 6.0 | 18.0 | 0.45 | 1.4 | 43.2 | 87 | 29.8 | 48.0 | 22.5 | 0.0 | 0.30 | 34.5 | 1811854.8860 | 254368.5365 | 0.0000 | 0.0000 | 420792.9892 | 772.5790 | 0.3428 | 0.065300 | 0.0000 | 0.0000 | 0.72 |
| 64PE327_6-MUC | NICYCLE I, 64PE327 | Frisian Front | 0 | 53.767 | 4.767 | -33 | 2010-11-27 | 35.0 | 23.0 | 28.0 | 6.0 | 0.46 | 34.6 | 10718476.3400 | 1500.0000 | 2956.2863 | 3580.9099 | 510403.6354 | 1005.5690 | 0.3872 | 0.073800 | |||||||||
| 64PE327_7-MUC | NICYCLE I, 64PE327 | Dutch Coast | 0 | 53.401 | 5.150 | 2010-11-28 | 8.2 | 21.9 | 0.45 | 1.3 | 0.6 | 235 | 0.0 | 0.9 | 57.7 | 41.3 | 0.03 | 31.7 | 30045.8017 | 2118.9381 | 0.0000 | 0.0000 | 0.0000 | 0.0000 | 0.0463 | 0.008821 | 0.0000 | 0.0000 | 0.29 | |
| 64PE329_1-MUC | NICYCLE II, 64PE329 | Dogger Bank | 0 | 55.170 | 3.150 | -24 | 2011-02-09 | 7.4 | 22.3 | 0.32 | 1.5 | 0.5 | 210 | 0.0 | 6.4 | 62.6 | 31.0 | 0.03 | 34.8 | 0.0000 | 0.0000 | 0.0000 | 0.0000 | 0.0000 | 0.0000 | 0.2115 | 0.040300 | 0.7840 | 0.3193 | 0.45 |
| 64PE329_4-MUC | NICYCLE II, 64PE329 | Oyster Ground | 0 | 54.130 | 4.330 | -43 | 2011-02-10 | 3.1 | 16.9 | 0.23 | 1.5 | 26.6 | 87 | 29.8 | 48.0 | 22.5 | 0.0 | 0.30 | 34.4 | 25622165.5300 | 1450623.5320 | 226024.0373 | 110653.4526 | 756470.6983 | 1268.4920 | 0.6506 | 0.124000 | 2.3080 | 0.4747 | 2.95 |
| 64PE329_6-MUC | NICYCLE II, 64PE329 | Frisian Front | 0 | 53.767 | 4.767 | -32 | 2011-02-11 | 35.0 | 23.0 | 28.0 | 6.0 | 0.46 | 34.5 | 8156779.6610 | 159504.4934 | 15158986.1800 | 538416.7010 | 483102.7461 | 548.0064 | 1.8565 | 0.353900 | |||||||||
| 64PE329_7-MUC | NICYCLE II, 64PE329 | Dutch Coast | 0 | 53.401 | 5.150 | 2011-02-12 | 6.2 | 44.2 | 0.57 | 1.0 | 24.9 | 235 | 0.0 | 0.9 | 57.7 | 41.3 | 0.03 | 30.1 | 6050.5906 | 1627.6454 | 0.0000 | 0.0000 | 0.0000 | 0.0000 | 0.2223 | 0.042400 | 0.1639 | 0.1221 | 0.12 | |
| 64PE337_1-MUC | NICYCLE III, 64PE337 | Dogger Bank | 0 | 55.170 | 3.150 | -24 | 2011-05-26 | 2.2 | 8.7 | 0.36 | 1.9 | 8.0 | 210 | 0.0 | 6.4 | 62.6 | 31.0 | 0.03 | 34.9 | 2691.5304 | 2655.4968 | 0.0000 | 0.0000 | 0.0000 | 0.0000 | 0.3294 | 0.062800 | 0.0000 | 0.0000 | 0.00 |
| 64PE337_4-MUC | NICYCLE III, 64PE337 | Oyster Ground | 0 | 54.130 | 4.330 | -44 | 2011-05-28 | 8.7 | 20.3 | 0.42 | 1.7 | 42.3 | 87 | 29.8 | 48.0 | 22.5 | 0.0 | 0.30 | 34.3 | 18706800.0000 | 8736668.8300 | 0.0000 | 0.0000 | 740298.1214 | 851.1603 | 0.3324 | 0.063400 | 10.4394 | 4.6058 | 0.93 |
| 64PE337_6-MUC | NICYCLE III, 64PE337 | Frisian Front | 0 | 53.767 | 4.767 | -33 | 2011-05-29 | 35.0 | 23.0 | 28.0 | 6.0 | 0.46 | 34.6 | 2522117.2960 | 365853.9559 | 0.0000 | 0.0000 | 870264.9693 | 115.4965 | 1.6738 | 0.319000 | |||||||||
| 64PE337_7-MUC | NICYCLE III, 64PE337 | Dutch Coast | 0 | 53.401 | 5.150 | 2011-05-30 | 10.2 | 11.8 | 1.50 | 1.5 | 8.3 | 235 | 0.0 | 0.9 | 57.7 | 41.3 | 0.03 | 32.2 | 3715.9627 | 1188.2996 | 0.0000 | 0.0000 | 0.0000 | 0.0000 | 0.1659 | 0.031600 | 1.3262 | 0.2208 | 0.88 | |
| 64PE343_1-MUC | NICYCLE IV, 64PE343 | Dogger Bank | 0 | 55.170 | 3.150 | -26 | 2011-08-22 | 4.5 | 14.7 | 0.46 | 3.9 | 11.1 | 210 | 0.0 | 6.4 | 62.6 | 31.0 | 0.03 | 34.7 | 0.0000 | 0.0000 | 4984.8214 | 890.1969 | 0.0000 | 0.0000 | 1.3098 | 0.249700 | 1.0985 | 0.8551 | 0.81 |
| 64PE343_4-MUC | NICYCLE IV, 64PE343 | Oyster Ground | 0 | 54.130 | 4.330 | -45 | 2011-08-24 | 11.4 | 8.4 | 0.90 | 1.4 | 56.0 | 87 | 29.8 | 48.0 | 22.5 | 0.0 | 0.30 | 34.7 | 13645038.1700 | 6077794.8710 | 6017292.1270 | 169102.0632 | 766188.4790 | 385.8275 | 0.4665 | 0.088900 | 12.7553 | 25.1437 | 2.22 |
| 64PE343_6-MUC | NICYCLE IV, 64PE343 | Frisian Front | 0 | 53.767 | 4.767 | -34 | 2011-08-25 | 35.0 | 23.0 | 28.0 | 6.0 | 0.46 | 34.4 | 61742286.7500 | 3775314.5330 | 1758163.4340 | 210898.0325 | 1393788.9790 | 2409.5910 | 2.4151 | 0.460300 | |||||||||
| 64PE343_7-MUC | NICYCLE IV, 64PE343 | Dutch Coast | 0 | 53.401 | 5.150 | 2011-08-26 | 14.5 | 6.8 | 1.70 | 0.9 | 59.9 | 235 | 0.0 | 0.9 | 57.7 | 41.3 | 0.03 | 31.7 | 6347.0571 | 261.2753 | 0.0000 | 0.0000 | 0.0000 | 0.0000 | 0.4923 | 0.093800 | 0.6210 | 1.0242 | 0.27 |