Liang, Xuefang; Li, Wei; Wang, Weimin; Cheng, Gang; Zha, Jinmiao (2012): (Table A.3) BLAST-unique proteins [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.787153, In: Liang, X et al. (2012): Liver proteome profiling of juvenile Chinese sturgeon (Acipenser sinensis) using GeLC-MS/MS approach [dataset publication series]. PANGAEA, https://doi.org/10.1594/PANGAEA.787154
Always quote citation above when using data! You can download the citation in several formats below.
Related to:
Liang, Xuefang; Li, Wei; Wang, Weimin; Cheng, Gang; Zha, Jinmiao (in prep.): Liver proteome profiling of juvenile Chinese sturgeon (Acipenser sinensis) using GeLC-MS/MS approach.
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Database accession number | Accession no | Liang, Xuefang | |||
| 2 | Name | Name | Liang, Xuefang | |||
| 3 | Peptide | Pep | # | Liang, Xuefang | ||
| 4 | Peptide, unique | Pep unique | # | Liang, Xuefang | ||
| 5 | Biological process | Bio proc | Liang, Xuefang | |||
| 6 | Molecular function | Mol func | Liang, Xuefang | |||
| 7 | Cellular component | Cell comp | Liang, Xuefang |
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Size:
336 data points
Data
| 1 Accession no | 2 Name | 3 Pep [#] | 4 Pep unique [#] | 5 Bio proc | 6 Mol func | 7 Cell comp |
|---|---|---|---|---|---|---|
| A0MTA1 | DNA-(apurinic or apyrimidinic site) lyase | 1 | 1 | DNA demethylation; DNA repair | DNA binding; DNA-(apurinic or apyrimidinic site) lyase activity; RNA binding; endonuclease activity; metal ion binding | endoplasmic reticulum; mitochondrion; nuclear speck; nucleolus |
| A2BGG1 | Myotubularin-related protein 12 | 1 | 1 | phosphatase activity | cytoplasm | |
| A2BIR6 | UPF0249 protein ydjC homolog | 1 | 1 | carbohydrate metabolic process | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | |
| A3KPM6 | Novel protein similar to H.sapiens GRM3, glutamate receptor, metabotropic 3 (GRM3) | 1 | 1 | G-protein coupled receptor activity | integral to membrane; plasma membrane | |
| A4UQV6 | Ncx4a | 1 | 1 | cell communication; | calcium:sodium antiporter activity | cytosol; integral to membrane |
| A5HAK2 | RNase 3 | 1 | 1 | angiogenesis; | RNA binding; pancreatic ribonuclease activity | |
| A5WVX0 | Novel protein similar to vertebrate inosine triphosphatase (Nucleoside triphosphate pyrophosphatase) (ITPA) | 1 | 1 | hydrolase activity | ||
| A5WWE5 | Eukaryotic translation initiation factor 2B, subunit 1 alpha | 1 | 1 | regulation of translational initiation | guanyl-nucleotide exchange factor activity; translation initiation factor activity | eukaryotic translation initiation factor 2B complex |
| A7E2I7 | Transmembrane protein 151B | 1 | 1 | integral to membrane | ||
| A8E5F3 | Glyoxalase domain containing 4 | 6 | 1 | |||
| A8E7S9 | Novel protein similar to vertebrate relaxin 3 receptor 2 (RLN3R2) | 1 | 1 | angiotensin type II receptor activity | integral to membrane | |
| A8HAI8 | Novel protein similar to vertebrate alanyl-tRNA synthetase like (AARSL) | 1 | 1 | alanyl-tRNA aminoacylation | ATP binding; alanine-tRNA ligase activity; nucleic acid binding | cytoplasm |
| A9JT06 | Novel protein similar to vertebrate eukaryotic translation initiation factor 4E (Zgc:110154, EIF4E) | 1 | 1 | translation initiation factor activity | cytoplasm | |
| B0JZK2 | Zgc:174646 protein | 1 | 1 | nucleic acid binding; zinc ion binding | intracellular | |
| B0S5M9 | Novel protein similar to vertebrate tryptophanyl tRNA synthetase 2 (Mitochondrial) (WARS2, zgc:110828) | 1 | 1 | tryptophanyl-tRNA aminoacylation | ATP binding; tryptophan-tRNA ligase activity | cytoplasm |
| B0S5X2 | Novel protein similar to vertebrate transmembrane protein 132D (TMEM132D) | 1 | 1 | integral to membrane | ||
| B8JLL1 | Novel protein similar to vertebrate uridine monophosphate synthetase (UMPS, zgc:55702) | 1 | 1 | de novo' UMP biosynthetic process; 'de novo' pyrimidine base biosynthetic process | orotate phosphoribosyltransferase activity; orotidine-5'-phosphate decarboxylase activity | |
| E7FA79 | Uncharacterized protein | 1 | 1 | receptor activity | ||
| E7FE01 | Uncharacterized protein | 1 | 1 | RNA binding; ribonuclease activity | ||
| F1QY31 | Uncharacterized protein | 1 | 1 | regulation of cell cycle | nucleus | |
| Q08C47 | Zgc:153632 | 9 | 1 | actin filament binding; protein binding, bridging | ||
| Q0P3Z3 | Zgc:153664 | 1 | 1 | translation | structural constituent of ribosome | ribosome |
| Q0P447 | Zgc:153414 | 1 | 1 | zinc ion binding | ||
| Q1L9B2 | Novel protein | 1 | 1 | proteolysis | cysteine-type peptidase activity | |
| Q1LWH1 | Ribosomal protein S16 | 3 | 1 | translation | structural constituent of ribosome | ribosome |
| Q1LY63 | Novel protein similar to vertebrate zinc finger and BTB domain containing 7 (ZBTB7) | 2 | 1 | nucleic acid binding; zinc ion binding | ||
| Q45NF8 | Pcp4a | 1 | 1 | |||
| Q502M1 | Phosphoinositide-3-kinase, class 3 | 1 | 1 | phosphatidylinositol-mediated signaling | 1-phosphatidylinositol-3-kinase activity; binding | phosphatidylinositol 3-kinase complex |
| Q5MK87 | Fgf23 | 1 | 1 | growth factor activity | ||
| Q5PRC4 | Zgc:101650 | 1 | 1 | |||
| Q5RKM6 | Phenylalanine-tRNA synthetase-like | 1 | 1 | phenylalanyl-tRNA aminoacylation | ATP binding; RNA binding; magnesium ion binding; phenylalanine-tRNA ligase activity | cytoplasm |
| Q5XJ10 | Glyceraldehyde-3-phosphate dehydrogenase | 111 | 3 | glycolysis; neuron apoptosis; peptidyl-cysteine S-trans-nitrosylation; protein stabilization | NAD binding; glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity; peptidyl-cysteine S-nitrosylase activity | cytosol; nucleus |
| Q5XJT6 | Galactosidase, alpha | 1 | 1 | glycoside catabolic process; glycosylceramide catabolic process; oligosaccharide metabolic process | alpha-galactosidase activity; cation binding | cytoplasm |
| Q642J9 | Serum amyloid A protein | 1 | 1 | acute-phase response; response to bacterium | high-density lipoprotein particle | |
| Q66HU6 | Camsap1 protein | 1 | 1 | |||
| Q6AZB2 | 3-oxoacid CoA transferase 1 | 1 | 1 | ketone body catabolic process | CoA-transferase activity | |
| Q6DGV3 | General transcription factor IIH, polypeptide 3 | 1 | 1 | DNA repair; regulation of transcription, DNA-dependent | core TFIIH complex | |
| Q6DI20 | Dipeptidylpeptidase 3 | 4 | 2 | proteolysis | dipeptidyl-peptidase activity | cytoplasm |
| Q6P0K4 | Zgc:77126 | 4 | 1 | carbohydrate biosynthetic process | catalytic activity | |
| Q76C29 | DAN related protein | 1 | 1 | negative regulation of activin receptor signaling pathway | protein binding | |
| Q7SXR7 | Metastasis associated 1 family, member 2 | 1 | 1 | sequence-specific DNA binding; sequence-specific DNA binding transcription factor activity; zinc ion binding | ||
| Q7T2A8 | SH3 domain binding glutamic acid-rich protein like | 1 | 1 | |||
| Q7T340 | Developmentally regulated GTP binding protein 1 | 1 | 1 | GTP binding | intracellular | |
| Q7ZUG1 | Rpl12 protein | 6 | 1 | translation | structural constituent of ribosome | ribosome |
| Q9PTP1 | Proliferating cell nuclear antigen | 1 | 1 | DNA replication; regulation of DNA replication; translesion synthesis | DNA binding; DNA polymerase processivity factor activity | PCNA complex; PCNA-p21 complex |
| Q9PWL5 | Homeobox protein Hox-A4a | 2 | 1 | multicellular organismal development | sequence-specific DNA binding; sequence-specific DNA binding transcription factor activity | nucleus |
| E7F5W0 | Non-lysosomal glucosylceramidase | 1 | 1 | glucosylceramide catabolic process | glucosylceramidase activity | integral to membrane; plasma membrane |
| E7F680 | PREDICTED: magnesium transporter MRS2 homolog, mitochondrial-like | 1 | 1 | |||
| E7F3B6 | PREDICTED: hypothetical protein LOC571902 | 1 | 1 | |||
| gi|189523618 | PREDICTED: sodium/myo-inositol cotransporter-like | 1 | 1 | |||
| gi|289547621 | amylo-1, 6-glucosidase, 4-alpha-glucanotransferase | 3 | 1 | |||
| gi|292616709 | PREDICTED: hypothetical protein LOC100004683 | 1 | 1 | |||
| gi|292611331 | PREDICTED: metabotropic glutamate receptor 5-like | 2 | 1 | |||
| gi|326664133 | PREDICTED: protein Dok-7 | 1 | 1 | |||
| gi|326672242 | PREDICTED: glutamate receptor delta-1 subunit-like | 1 | 1 | |||
| gi|326672384 | PREDICTED: neuralized-like protein 4-like | 1 | 1 | |||
| gi|326672803 | PREDICTED: potassium channel SKOR | 1 | 1 | |||
| gi|326674301 | PREDICTED: protein furry homolog | 2 | 2 | |||
| A8QXL4 | Glucose-6-phosphate isomerase [Acipenser ruthenus] | 8 | 2 | gluconeogenesis; glycolysis | glucose-6-phosphate isomerase activity | cytoplasm |
| Q6T1Y9 | Cytochrome c oxidase subunit 2 [Huso huso] | 8 | 2 | respiratory electron transport chain | copper ion binding; cytochrome-c oxidase activity; electron carrier activity; heme binding | integral to membrane; mitochondrial inner membrane; respiratory chain |