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Liang, Xuefang; Li, Wei; Wang, Weimin; Cheng, Gang; Zha, Jinmiao (2012): Liver proteome profiling of juvenile Chinese sturgeon (Acipenser sinensis) using GeLC-MS/MS approach [dataset publication series]. PANGAEA, https://doi.org/10.1594/PANGAEA.787154

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Abstract:
Chinese sturgeon (Acipenser sinensis), mainly distributed in the Yangtze River, has been listed as a grade I protected animal in China because of a dramatic decline in population owing to loss of natural habitat for reproduction and interference by human activities. Understanding the proteome profile of Chinese sturgeon liver would provide an invaluable resource for protecting and increasing the stocks of this species. In this study, we have analyzed proteome profiles of juvenile Chinese sturgeon liver using a one-dimensional gel electrophoresis coupled to LC-MS/MS approach. A total of 1059 proteins and 2084 peptides were identified. The liver proteome was found to be associated with diverse biological processes, cellular components and molecular functions. The proteome profile identified a variety of significant pathways including carbohydrate metabolism, fatty acid metabolism and amino acid metabolism pathways. It also established a network for protein biosynthesis, folding and catabolic processes. The proteome profile established in this study can be used for understanding the development of Chinese sturgeon and studying the molecular mechanisms of action under environmental or chemical stress, providing very useful omics information that can be applied to preserve this species.
Related to:
Liang, Xuefang; Li, Wei; Wang, Weimin; Cheng, Gang; Zha, Jinmiao (in prep.): Liver proteome profiling of juvenile Chinese sturgeon (Acipenser sinensis) using GeLC-MS/MS approach.
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
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3 datasets

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Datasets listed in this publication series

  1. Liang, X; Li, W; Wang, W et al. (2012): (Table A.1) Identified proteome based on zebrafish database. https://doi.org/10.1594/PANGAEA.787148
  2. Liang, X; Li, W; Wang, W et al. (2012): (Table A.2) Identified proteome based on sturgeon database. https://doi.org/10.1594/PANGAEA.787149
  3. Liang, X; Li, W; Wang, W et al. (2012): (Table A.3) BLAST-unique proteins. https://doi.org/10.1594/PANGAEA.787153