PANGAEA_996221
Tissue-accumulated nickel, chromium and cobalt concentrations in Ostrea edulis measured by ICP-OES at the end of a chronic alkalinity-enhancement exposure experiment
Rump, Marco; Lannig, Gisela; Bock, Christian; Benthien, Albert; Pogoda, Bernadette; Antoni, Dominik; Gerdts, Gunnar
Tissue-accumulated nickel, chromium and cobalt concentrations in Ostrea edulis measured by ICP-OES at the end of a chronic alkalinity-enhancement exposure experiment
2026-07-29
PANGAEA
Dataset
https://doi.pangaea.de/10.1594/PANGAEA.996221
Investigator
Marco
Rump
marco.rump@awi.de
Earth Science
Event label
Type of study
Tissues
Sample ID
Individual ID
Experiment day
Sampling date
Treatment
Tissue, dry mass
Vial, mass
Sample, wet mass
Nickel
Chromium
Cobalt
Nickel
Chromium
Cobalt
geoscientificInformation
ChronicOystersOAE_2024
ecotoxicology
Mesocosm experiment
ocean alkalinity enhancement
Ostrea edulis
2024-04-17
2025-03-12
Complete
54.180327
54.180327
7.888944
7.888944
access rights needed
CC-BY-4.0: Creative Commons Attribution 4.0 International (License comes into effect after moratorium ends)
English
PANGAEA
Data Publisher for Earth & Environmental Science
https://www.pangaea.de/
Data Center Contact
Michael
Diepenbroek
info@pangaea.de
Leobener Str.
Bremen
Bremen
28359
Germany
online
1017 data points
text/tab-separated-values
Rump, Marco; et al. (submitted): Ecotoxicological impacts of Ocean Alkalinity Enhancement on the European flat oyster Ostrea edulis: Insights from tissue metabolomics and metal analysis.
Rump, Marco; Lannig, Gisela; Bock, Christian; Benthien, Albert; Pogoda, Bernadette; Antoni, Dominik; Gerdts, Gunnar (2026): Carbonate chemistry parameters calculated from measured pH, total alkalinity, salinity and temperature in the alkalization mesocosms of a chronic Ostrea edulis alkalinity-enhancement exposure experiment [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.996219
Rump, Marco; Lannig, Gisela; Bock, Christian; Benthien, Albert; Pogoda, Bernadette; Antoni, Dominik; Gerdts, Gunnar (2026): Carbonate chemistry parameters calculated from measured pH, total alkalinity, salinity and temperature in the exposure mesocosms of a chronic Ostrea edulis alkalinity-enhancement exposure experiment [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.996220
Rump, Marco; Lannig, Gisela; Bock, Christian; Benthien, Albert; Pogoda, Bernadette; Antoni, Dominik; Gerdts, Gunnar (2026): Concentrations of 27 polar metabolites in gill and mantle tissue of Ostrea edulis measured by ¹H-NMR spectroscopy during a chronic alkalinity-enhancement exposure experiment [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.996222
Rump, Marco; Lannig, Gisela; Bock, Christian; Benthien, Albert; Pogoda, Bernadette; Antoni, Dominik; Gerdts, Gunnar (2026): Glycogen concentration in the labial palps of Ostrea edulis during a chronic alkalinity-enhancement exposure experiment [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.996218
Rump, Marco; Lannig, Gisela; Bock, Christian; Benthien, Albert; Pogoda, Bernadette; Antoni, Dominik; Gerdts, Gunnar (2026): Oyster mortality and physicochemical parameters in the exposure mesocosms of a chronic Ostrea edulis alkalinity-enhancement exposure experiment [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.996216
Rump, Marco; Lannig, Gisela; Bock, Christian; Benthien, Albert; Pogoda, Bernadette; Antoni, Dominik; Gerdts, Gunnar (2026): Total alkalinity and pH during a short-term feeding experiment testing the contribution of shellfish diet (Reed Mariculture SD1800) to seawater alkalinity [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.996217
Rump, Marco; Lannig, Gisela; Bock, Christian; Benthien, Albert; Pogoda, Bernadette; Antoni, Dominik; Gerdts, Gunnar (2026): Total alkalinity and pH in the alkalization mesocosms of a chronic Ostrea edulis alkalinity-enhancement exposure experiment [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.996214
Rump, Marco; Lannig, Gisela; Bock, Christian; Benthien, Albert; Pogoda, Bernadette; Antoni, Dominik; Gerdts, Gunnar (2026): Total alkalinity and pH in the exposure mesocosms of a chronic Ostrea edulis alkalinity-enhancement exposure experiment [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.996215
This dataset contains nickel, chromium and cobalt concentrations measured in gill, mantle and hepatopancreas tissue of individual European flat oysters (Ostrea edulis) sampled on day 63 (9 July 2024) at the end of the chronic alkalinity-enhancement exposure experiment. A total of 19 individual oysters were sampled (5 control, 5 olivine 250, 3 olivine 500, 3 dissolved 250 and 3 dissolved 500); not all three tissues could be obtained from every individual due to tissue availability. Ten measurements of the certified reference material ERM-CE278k (mussel tissue) are included across the three tissue batches for quality control. Samples for metal analysis were freeze-dried for 24 h, and dry weight was recorded prior to extraction. Extraction vials were pre-cleaned (p.a. quality) with concentrated nitric acid (65 %, single-distilled) and dried for 48 h. Approximately 2 mL of nitric acid was added to the dried tissues, followed by thermic digestion using a microwave digestion system (5 min heating at 400 W; 5 min heating to 100 °C at 800 W; 20 min heating to 175 °C and 20 min held, 1600 W). The digested solutions were transferred to clean vials and diluted to 25 mL; vials were weighed before and after filling to determine the precise sample weight. Metal concentrations of Ni, Cr and Co were measured on 12 March 2025 at the AWI ICP Facility on a Thermo Scientific iCAP 7000 Series Inductively Coupled Plasma Optical Emission Spectrometer (ICP-OES). Calibration was performed with an in-house standard composed of the respective individual element standards (ICP-Standards ROTI® Star, Carl Roth). The standard deviation of the control standard was 0.1 µg/l for Ni, 0.3 µg/l for Cr and 0.2 µg/l for Co. External reproducibility (RSD) was 0.5 % for Ni, 1.2 % for Cr and 0.7 % for Co. Limits of detection and quantification were 0.13 and 0.7 µg/l for Ni; 0.26 and 1.32 µg/l for Cr; and 0.10 and 0.47 µg/l for Co. Analytical accuracy was verified with the certified reference material ERM-CE278k. ** For all details see the full metadata description at "https://doi.pangaea.de/10.1594/PANGAEA.996221"!
http://invabio.wdc-mare.org/mesocubi.jpg
Mesocosm experiment
https://doi.pangaea.de/10.1594/PANGAEA.996214
Total alkalinity and pH in the alkalization mesocosms of a chronic Ostrea edulis alkalinity-enhancement exposure experiment
https://doi.pangaea.de/10.1594/PANGAEA.996215
Total alkalinity and pH in the exposure mesocosms of a chronic Ostrea edulis alkalinity-enhancement exposure experiment
https://doi.pangaea.de/10.1594/PANGAEA.996216
Oyster mortality and physicochemical parameters in the exposure mesocosms of a chronic Ostrea edulis alkalinity-enhancement exposure experiment
https://doi.pangaea.de/10.1594/PANGAEA.996217
Total alkalinity and pH during a short-term feeding experiment testing the contribution of shellfish diet (Reed Mariculture SD1800) to seawater alkalinity
https://doi.pangaea.de/10.1594/PANGAEA.996218
Glycogen concentration in the labial palps of Ostrea edulis during a chronic alkalinity-enhancement exposure experiment
https://doi.pangaea.de/10.1594/PANGAEA.996219
Carbonate chemistry parameters calculated from measured pH, total alkalinity, salinity and temperature in the alkalization mesocosms of a chronic Ostrea edulis alkalinity-enhancement exposure experiment
https://doi.pangaea.de/10.1594/PANGAEA.996220
Carbonate chemistry parameters calculated from measured pH, total alkalinity, salinity and temperature in the exposure mesocosms of a chronic Ostrea edulis alkalinity-enhancement exposure experiment
https://doi.pangaea.de/10.1594/PANGAEA.996222
Concentrations of 27 polar metabolites in gill and mantle tissue of Ostrea edulis measured by ¹H-NMR spectroscopy during a chronic alkalinity-enhancement exposure experiment
PANGAEA_996264
DIF
9.4
2026-07-29
2026-07-29