PANGAEA_996176
Seawater carbonate chemistry and effects of ocean liming on plankton growth and grazing in the Eastern Mediterranean
Traboni, Claudia; Nocera, Ariadna C; Romano, Filomena; Courboulès, Justine; Chantzaras, Christos; Magiopoulos, Iordanis; Varliero, Selene; Basso, Daniela; Pitta, Paraskevi
Seawater carbonate chemistry and effects of ocean liming on plankton growth and grazing in the Eastern Mediterranean
2026-07-23
PANGAEA
Dataset
https://doi.pangaea.de/10.1594/PANGAEA.996176
Investigator
Claudia
Traboni
claudia.traboni@szn.it
Investigator
Yan
Yang
yangyan@xmu.edu.cn
Earth Science
Type of study
Figure
Treatment
Experiment
Chlorophyll a
Chlorophyll a, standard deviation
High nucleic acid bacteria
High nucleic acid bacteria, standard deviation
Low nucleic acid bacteria
Low nucleic acid bacteria, standard deviation
Synechococcus
Synechococcus, standard deviation
Flagellates, pigmented
Flagellates, pigmented, standard deviation
Diatoms
Diatoms, standard deviation
Dinoflagellates
Dinoflagellates, standard deviation
Ciliates
Ciliates, standard deviation
Growth rate
Growth rate, standard deviation
Grazing rate
Grazing rate, standard deviation
Group
Abundance
Size
Electivity index
Temperature, water
Irradiance
pH, NBS scale
Alkalinity, total
Salinity
Ammonium
Nitrate
Phosphate
Silicate
Carbonate system computation flag
pH, total scale
Carbon dioxide
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Alkalinity, total
Aragonite saturation state
Calcite saturation state
geoscientificInformation
Behaviour
Biomass/Abundance/Elemental composition
Coast and continental shelf
Community composition and diversity
Entire community
Growth/Morphology
Laboratory experiment
Mediterranean Sea
Mesocosm or benthocosm
Ocean alkalinity enhancement
Other studied parameter or process
Pelagos
Temperate
Calculated using seacarb after Nisumaa et al. (2010)
Complete
OA-ICC
Ocean Acidification International Coordination Centre
unrestricted
CC-BY-4.0: Creative Commons Attribution 4.0 International
English
PANGAEA
Data Publisher for Earth & Environmental Science
https://www.pangaea.de/
Data Center Contact
Michael
Diepenbroek
info@pangaea.de
Leobener Str.
Bremen
Bremen
28359
Germany
online
20643 data points
text/tab-separated-values
Traboni, Claudia; Nocera, Ariadna C; Romano, Filomena; Courboulès, Justine; Chantzaras, Christos; Magiopoulos, Iordanis; Varliero, Selene; Basso, Daniela; Pitta, Paraskevi (2025): Plankton do not care: Minimal effects of ocean liming on plankton growth and grazing in the Eastern Mediterranean. Limnology and Oceanography, 70(S2), https://doi.org/10.1002/lno.70136
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024
Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
In the framework of a mesocosm experiment, we conducted three dilution incubations to assess natural plankton response (abundance, composition, growth, grazing, diet, and food selectivity) to liming, achieved with calcium hydroxide (Ca(OH)2) additions. Experiments included two liming treatments (low concentration, and high concentration) and a control treatment without Ca(OH)2.
This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were provided by the author of the related paper (see Related to) to the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2026-07-22. ** For all details see the full metadata description at "https://doi.pangaea.de/10.1594/PANGAEA.996176"!
http://mel.xmu.edu.cn/en/
https://cran.r-project.org/web/packages/seacarb/index.html
seacarb: seawater carbonate chemistry with R. R package version 3.3.3
https://doi.org/10.1002/lno.70136
Plankton do not care: Minimal effects of ocean liming on plankton growth and grazing in the Eastern Mediterranean
https://doi.org/10.5194/essd-16-3771-2024
An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal
https://doi.org/10.5194/essd-2-167-2010
Calculated using seacarb after Nisumaa et al. (2010)
https://doi.org/10.5194/essd-2-167-2010
EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification
https://doi.org/10.5194/essd-8-79-2016
Data compilation on the biological response to ocean acidification: an update
https://en.wikipedia.org/wiki/Alkalinity
Alkalinity, total
https://hdl.handle.net/10013/epic.32187.d001
Chlorophyll a
https://hdl.handle.net/10013/epic.32440.d001
Irradiance
https://www.iaea.org/services/oa-icc/science-and-collaboration/data-access-and-management
OA-ICC
DIF
9.4
2026-07-23
2026-08-21