Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu Harvard University https://ror.org/03vek6s52 Delaney Jennifer A Harvard University https://ror.org/03vek6s52 Morkeski K Woods Hole Oceanographic Institution WHOI https://ror.org/03zbnzt98 Ross Abby University of Colorado Boulder https://ror.org/02ttsq026 Wang Zhaohui Aleck 0000-0002-0540-662X Woods Hole Oceanographic Institution WHOI https://ror.org/03zbnzt98 Girguis Peter R 0000-0002-3599-8160 Harvard University https://ror.org/03vek6s52 2026 Seawater carbonate chemistry and calcifying fluid chemistry of Crassostrea virginica dataset https://doi.org/10.1594/PANGAEA.995588 2026-06-18T08:38:55 To better understand oysters' molecular mechanisms and the role of their calcifying-fluid microbes, we conducted experiments that simulated a tidal cycle, measured calcifying fluid pH and total dissolved inorganic carbon, and characterized host and microbial gene expression via transcriptomics. This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were extracted from tables in the related paper (see Related to) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2026-06-18. Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu Delaney Jennifer A Morkeski K Ross Abby Wang Zhaohui Aleck 0000-0002-0540-662X Girguis Peter R 0000-0002-3599-8160 2026 Coexpression among eastern oyster host and microbiome genes suggests coordinated regulation of calcifying fluid chemistry journal article Proceedings of the National Academy of Sciences of the United States of America 123(11) https://doi.org/10.1073/pnas.2521539123 e2521539123 Nisumaa Anne-Marin annemarin@gmail.com Pesant Stephane pesant@ebi.ac.uk 0000-0002-4936-5209 Bellerby Richard G J Richard.Bellerby@niva.no http://www2.bjerknes.uib.no/pages.asp?pid=21&kat=5&lang=2 Delille Bruno bruno.delille@uliege.be 0000-0003-0502-8101 Middelburg Jack J jmiddelburg@nioo.knaw.nl 0000-0003-3601-9072 Orr James C j.orr@iaea.org 0000-0002-8707-7080 Riebesell Ulf uriebesell@geomar.de https://www.geomar.de/uriebesell/ 0000-0002-9442-452X Tyrrell Toby t.tyrrell@noc.soton.ac.uk Wolf-Gladrow Dieter A dieter.wolf-gladrow@awi.de https://www.awi.de/en/about-us/organisation/staff/single-view/dieter-wolf-gladrow.html 0000-0001-9531-8668 Gattuso Jean-Pierre jean-pierre.gattuso@imev-mer.fr 0000-0002-4533-4114 2010 EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification journal article Earth System Science Data 2(2) https://doi.org/10.5194/essd-2-167-2010 167-175 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 Brockmann Patrick Galdino Carolina Schindler Uwe uschindler@pangaea.de https://blog.thetaphi.de/ 0000-0002-1900-4162 Gazeau Frédéric frederic.gazeau@imev-mer.fr 0000-0001-8807-4597 2024 An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal journal article Earth System Science Data 16(8) https://doi.org/10.5194/essd-16-3771-2024 3771-3780 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 Hansson L Gattuso Jean-Pierre jean-pierre.gattuso@imev-mer.fr 0000-0002-4533-4114 2016 Data compilation on the biological response to ocean acidification: an update journal article Earth System Science Data 8(1) https://doi.org/10.5194/essd-8-79-2016 79-87 Gattuso Jean-Pierre jean-pierre.gattuso@imev-mer.fr 0000-0002-4533-4114 Epitalon Jean-Marie Lavigne Héloïse hlavigne@naturalsciences.be 0009-0006-6766-0638 Orr James James.Orr@lsce.ipsl.fr Gentili Bernard bernard.gentili@orange.fr http://omtab.obs-vlfr.fr/personnes/z_gent_be/gentili.php Hagens Mathilde 0000-0003-3980-1043 Hofmann Andreas Mueller Jens-Daniel Proye Aurélien Rae James 0000-0003-3904-2526 Soetaert Karline karline.soetaert@nioz.nl 0000-0003-4603-7100 2024 seacarb: seawater carbonate chemistry with R. R package version 3.3.3 other https://cran.r-project.org/web/packages/seacarb/index.html GitHub - Andrea-Unzueta-Martinez/oyster-host-microbiome-transcriptomics: Count matrices and scripts for oyster host and microbiome transcriptomic analyses. · GitHub webpage https://github.com/Andrea-Unzueta-Martinez/oyster-host-microbiome-transcriptomics -70.3051 -70.3051 41.7104 41.7104 -70.3051 41.7104 OA-ICC Ocean Acidification International Coordination Centre https://www.iaea.org/services/oa-icc/science-and-collaboration/data-access-and-management International Atomic Energy Agency IAEA http://www.iaea.org https://ror.org/02zt1gg83 Barnstable_OA 41.7104 -70.3051 Experiment EXP 1030 CC-BY-4.0 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/ Type of study Study type type Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu Study type Species, unique identification Species UID species Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu Species UID Treatment Treat treatment Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu Treat Local Time Local time Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu Local time Replicates Repl # Abundance or Count Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu Repl [#] Salinity Sal salinity http://purl.obolibrary.org/obo/PATO_0085001 Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu Sal Salinity, standard deviation Sal std dev ± standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu Sal std dev [±] Salinity Sal salinity http://purl.obolibrary.org/obo/PATO_0085001 Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min Sal (min) Salinity Sal salinity http://purl.obolibrary.org/obo/PATO_0085001 Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max Sal (max) Temperature, water Temp °C Temperature Θ http://dbpedia.org/resource/Temperature water http://purl.obolibrary.org/obo/CHEBI_15377 Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu Temp [°C] Temperature, water, standard deviation Temp std dev ± Temperature Θ http://dbpedia.org/resource/Temperature water http://purl.obolibrary.org/obo/CHEBI_15377 standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu Temp std dev [±] Temperature, water Temp °C Temperature Θ http://dbpedia.org/resource/Temperature water http://purl.obolibrary.org/obo/CHEBI_15377 Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min Temp [°C] (min) Temperature, water Temp °C Temperature Θ http://dbpedia.org/resource/Temperature water http://purl.obolibrary.org/obo/CHEBI_15377 Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max Temp [°C] (max) pH, NBS scale pH NBS Potentiometric Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu pH NBS (Potentiometric) pH, standard deviation pH std dev ± standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Potentiometric Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu NBS scale pH std dev [±] (NBS scale, Potentiometric) pH, NBS scale pH NBS Potentiometric Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min pH NBS (min, Potentiometric) pH, NBS scale pH NBS Potentiometric Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max pH NBS (max, Potentiometric) Carbon, inorganic, dissolved DIC µmol/kg carbon C https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:27594 dissolved http://purl.obolibrary.org/obo/PATO_0001986 Molar Concentration Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu DIC [µmol/kg] Carbon, inorganic, dissolved, standard deviation DIC std dev ± carbon C https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:27594 dissolved http://purl.obolibrary.org/obo/PATO_0001986 standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu DIC std dev [±] Carbon, inorganic, dissolved DIC µmol/kg carbon C https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:27594 dissolved http://purl.obolibrary.org/obo/PATO_0001986 Molar Concentration Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min DIC [µmol/kg] (min) Carbon, inorganic, dissolved DIC µmol/kg carbon C https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:27594 dissolved http://purl.obolibrary.org/obo/PATO_0001986 Molar Concentration Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max DIC [µmol/kg] (max) Alkalinity, total AT µmol/kg total https://www.oxforddictionaries.com/definition/american_english/total Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu AT [µmol/kg] (Calculated with seacarb packa...) Alkalinity, total, standard deviation AT std dev ± total https://www.oxforddictionaries.com/definition/american_english/total standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu AT std dev [±] (Calculated with seacarb packa...) Alkalinity, total AT µmol/kg total https://www.oxforddictionaries.com/definition/american_english/total Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min AT [µmol/kg] (min, Calculated with seacarb ...) Alkalinity, total AT µmol/kg total https://www.oxforddictionaries.com/definition/american_english/total Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max AT [µmol/kg] (max, Calculated with seacarb ...) Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pCO2water_SST_wet ppmv partial pressure carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 water http://purl.obolibrary.org/obo/CHEBI_15377 Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu pCO2water_SST_wet [ppmv] (Calculated with seacarb packa...) Partial pressure of carbon dioxide, standard deviation pCO2 std dev ± partial pressure carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu pCO2 std dev [±] (Calculated with seacarb packa...) Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pCO2water_SST_wet ppmv partial pressure carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 water http://purl.obolibrary.org/obo/CHEBI_15377 Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min pCO2water_SST_wet [ppmv] (min, Calculated with seacarb ...) Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pCO2water_SST_wet ppmv partial pressure carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 water http://purl.obolibrary.org/obo/CHEBI_15377 Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max pCO2water_SST_wet [ppmv] (max, Calculated with seacarb ...) Carbonate ion [CO3]2- µmol/kg Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu [CO3]2- [µmol/kg] (Calculated with seacarb packa...) Carbonate ion, standard deviation [CO3]2- std dev ± standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu [CO3]2- std dev [±] (Calculated with seacarb packa...) Carbonate ion [CO3]2- µmol/kg Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min [CO3]2- [µmol/kg] (min, Calculated with seacarb ...) Carbonate ion [CO3]2- µmol/kg Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max [CO3]2- [µmol/kg] (max, Calculated with seacarb ...) Bicarbonate ion [HCO3]- µmol/kg Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu [HCO3]- [µmol/kg] (Calculated with seacarb packa...) Bicarbonate ion, standard deviation [HCO3]- std dev ± standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu [HCO3]- std dev [±] (Calculated with seacarb packa...) Bicarbonate ion [HCO3]- µmol/kg Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min [HCO3]- [µmol/kg] (min, Calculated with seacarb ...) Bicarbonate ion [HCO3]- µmol/kg Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max [HCO3]- [µmol/kg] (max, Calculated with seacarb ...) Carbon dioxide CO2 µmol/kg carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CO2 [µmol/kg] (Calculated with seacarb packa...) Carbon dioxide, standard deviation CO2 std dev ± carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CO2 std dev [±] (Calculated with seacarb packa...) Carbon dioxide CO2 µmol/kg carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min CO2 [µmol/kg] (min, Calculated with seacarb ...) Carbon dioxide CO2 µmol/kg carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max CO2 [µmol/kg] (max, Calculated with seacarb ...) Calcite saturation state Omega Cal Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu Omega Cal (Calculated with seacarb packa...) Calcite saturation state, standard deviation Omega Cal std dev ± standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu Omega Cal std dev [±] (Calculated with seacarb packa...) Calcite saturation state Omega Cal Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min Omega Cal (min, Calculated with seacarb ...) Calcite saturation state Omega Cal Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max Omega Cal (max, Calculated with seacarb ...) Aragonite saturation state Omega Arg aragonite saturation state Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu Omega Arg (Calculated with seacarb packa...) Aragonite saturation state, standard deviation Omega Arg std dev ± aragonite saturation state standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu Omega Arg std dev [±] (Calculated with seacarb packa...) Aragonite saturation state Omega Arg aragonite saturation state Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min Omega Arg (min, Calculated with seacarb ...) Aragonite saturation state Omega Arg aragonite saturation state Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max Omega Arg (max, Calculated with seacarb ...) Salinity Sal salinity http://purl.obolibrary.org/obo/PATO_0085001 Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu calcifying fluid Sal (calcifying fluid) Salinity, standard deviation Sal std dev ± standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu calcifying fluid Sal std dev [±] (calcifying fluid) Salinity Sal salinity http://purl.obolibrary.org/obo/PATO_0085001 Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min, calcifying fluid Sal (min, calcifying fluid) Salinity Sal salinity http://purl.obolibrary.org/obo/PATO_0085001 Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max, calcifying fluid Sal (max, calcifying fluid) Temperature, water Temp °C Temperature Θ http://dbpedia.org/resource/Temperature water http://purl.obolibrary.org/obo/CHEBI_15377 Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu calcifying fluid Temp [°C] (calcifying fluid) Temperature, water, standard deviation Temp std dev ± Temperature Θ http://dbpedia.org/resource/Temperature water http://purl.obolibrary.org/obo/CHEBI_15377 standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu calcifying fluid Temp std dev [±] (calcifying fluid) Temperature, water Temp °C Temperature Θ http://dbpedia.org/resource/Temperature water http://purl.obolibrary.org/obo/CHEBI_15377 Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min, calcifying fluid Temp [°C] (min, calcifying fluid) Temperature, water Temp °C Temperature Θ http://dbpedia.org/resource/Temperature water http://purl.obolibrary.org/obo/CHEBI_15377 Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max, calcifying fluid Temp [°C] (max, calcifying fluid) Calcifying fluid, pH CF pH calcifying fluid Potentiometric Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu NBS scale CF pH (NBS scale, Potentiometric) Calcifying fluid, pH, standard deviation CF pH std dev ± calcifying fluid standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Potentiometric Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu NBS scale CF pH std dev [±] (NBS scale, Potentiometric) Calcifying fluid, pH CF pH calcifying fluid Potentiometric Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min, NBS scale CF pH (min, NBS scale, Potentiometric) Calcifying fluid, pH CF pH calcifying fluid Potentiometric Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max, NBS scale CF pH (max, NBS scale, Potentiometric) Calcifying fluid, dissolved inorganic carbon CF DIC µmol/kg calcifying fluid dissolved inorganic carbon DIC Molar Concentration Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CF DIC [µmol/kg] Calcifying fluid, dissolved inorganic carbon, standard deviation CF DIC std dev ± calcifying fluid dissolved inorganic carbon DIC standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CF DIC std dev [±] Calcifying fluid, dissolved inorganic carbon CF DIC µmol/kg calcifying fluid dissolved inorganic carbon DIC Molar Concentration Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min CF DIC [µmol/kg] (min) Calcifying fluid, dissolved inorganic carbon CF DIC µmol/kg calcifying fluid dissolved inorganic carbon DIC Molar Concentration Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max CF DIC [µmol/kg] (max) Calcifying fluid, total alkalinity CF AT µmol/kg calcifying fluid Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CF AT [µmol/kg] (Calculated with seacarb packa...) Calcifying fluid, total alkalinity, standard deviation CF AT std dev ± calcifying fluid standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CF AT std dev [±] (Calculated with seacarb packa...) Calcifying fluid, total alkalinity CF AT µmol/kg calcifying fluid Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min CF AT [µmol/kg] (min, Calculated with seacarb ...) Calcifying fluid, total alkalinity CF AT µmol/kg calcifying fluid Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max CF AT [µmol/kg] (max, Calculated with seacarb ...) Calcifying fluid, partial pressure of carbon dioxide CF pCO2 ppmv calcifying fluid partial pressure carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CF pCO2 [ppmv] (Calculated with seacarb packa...) Calcifying fluid, partial pressure of carbon dioxide, standard deviation CF pCO2 std dev ± calcifying fluid partial pressure carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CF pCO2 std dev [±] (Calculated with seacarb packa...) Calcifying fluid, partial pressure of carbon dioxide CF pCO2 ppmv calcifying fluid partial pressure carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min CF pCO2 [ppmv] (min, Calculated with seacarb ...) Calcifying fluid, partial pressure of carbon dioxide CF pCO2 ppmv calcifying fluid partial pressure carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max CF pCO2 [ppmv] (max, Calculated with seacarb ...) Calcifying fluid, carbonate ion CF [CO3]2- µmol/kg calcifying fluid Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CF [CO3]2- [µmol/kg] (Calculated with seacarb packa...) Calcifying fluid, carbonate ion, standard deviation CF [CO3]2- std dev ± calcifying fluid standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CF [CO3]2- std dev [±] (Calculated with seacarb packa...) Calcifying fluid, carbonate ion CF [CO3]2- µmol/kg calcifying fluid Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min CF [CO3]2- [µmol/kg] (min, Calculated with seacarb ...) Calcifying fluid, carbonate ion CF [CO3]2- µmol/kg calcifying fluid Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max CF [CO3]2- [µmol/kg] (max, Calculated with seacarb ...) Calcifying fluid, bicarbonate ion CF HCO3 µmol/kg calcifying fluid Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CF HCO3 [µmol/kg] (Calculated with seacarb packa...) Calcifying fluid, bicarbonate ion, standard deviation CF HCO3 std dev ± calcifying fluid standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CF HCO3 std dev [±] (Calculated with seacarb packa...) Calcifying fluid, bicarbonate ion CF HCO3 µmol/kg calcifying fluid Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min CF HCO3 [µmol/kg] (min, Calculated with seacarb ...) Calcifying fluid, bicarbonate ion CF HCO3 µmol/kg calcifying fluid Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max CF HCO3 [µmol/kg] (max, Calculated with seacarb ...) Calcifying fluid, carbon dioxide CF CO2 µmol/kg calcifying fluid carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CF CO2 [µmol/kg] (Calculated with seacarb packa...) Calcifying fluid, carbon dioxide, standard deviation CF CO2 std dev ± calcifying fluid carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CF CO2 std dev [±] (Calculated with seacarb packa...) Calcifying fluid, carbon dioxide CF CO2 µmol/kg calcifying fluid carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min CF CO2 [µmol/kg] (min, Calculated with seacarb ...) Calcifying fluid, carbon dioxide CF CO2 µmol/kg calcifying fluid carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 Molar Concentration Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max CF CO2 [µmol/kg] (max, Calculated with seacarb ...) Calcifying fluid, calcite saturation state CF Omega Cal calcifying fluid Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CF Omega Cal (Calculated with seacarb packa...) Calcifying fluid, calcite saturation state, standard deviation CF Omega Cal (cf) std dev ± calcifying fluid standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CF Omega Cal (cf) std dev [±] (Calculated with seacarb packa...) Calcifying fluid, calcite saturation state CF Omega Cal calcifying fluid Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min CF Omega Cal (min, Calculated with seacarb ...) Calcifying fluid, calcite saturation state CF Omega Cal calcifying fluid Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max CF Omega Cal (max, Calculated with seacarb ...) Calcifying fluid, aragonite saturation state CF Omega Arg calcifying fluid aragonite saturation state Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CF Omega Arg (Calculated with seacarb packa...) Calcifying fluid, aragonite saturation state, standard deviation CF Omega Arg std dev ± calcifying fluid aragonite saturation state standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu CF Omega Arg std dev [±] (Calculated with seacarb packa...) Calcifying fluid, aragonite saturation state CF Omega Arg calcifying fluid aragonite saturation state Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu min CF Omega Arg (min, Calculated with seacarb ...) Calcifying fluid, aragonite saturation state CF Omega Arg calcifying fluid aragonite saturation state Calculated with seacarb package in R Unzueta-Martínez Andrea andrea_unzuetamartinez@fas.harvard.edu max CF Omega Arg (max, Calculated with seacarb ...) Carbonate system computation flag CSC flag Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 CSC flag (Calculated using seacarb afte...) pH, total scale pHT Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 pHT (Calculated using seacarb afte...) Carbon dioxide CO2 µmol/kg carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 Molar Concentration Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 CO2 [µmol/kg] (Calculated using seacarb afte...) Fugacity of carbon dioxide (water) at sea surface temperature (wet air) fCO2water_SST_wet µatm fugacity https://en.wikipedia.org/wiki/Fugacity carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 water http://purl.obolibrary.org/obo/CHEBI_15377 Energy Density http://dbpedia.org/resource/Energy_density Force Per Area Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 fCO2water_SST_wet [µatm] (Calculated using seacarb afte...) Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pCO2water_SST_wet µatm partial pressure carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 water http://purl.obolibrary.org/obo/CHEBI_15377 Energy Density http://dbpedia.org/resource/Energy_density Force Per Area Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 pCO2water_SST_wet [µatm] (Calculated using seacarb afte...) Bicarbonate ion [HCO3]- µmol/kg Molar Concentration Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 [HCO3]- [µmol/kg] (Calculated using seacarb afte...) Carbonate ion [CO3]2- µmol/kg Molar Concentration Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 [CO3]2- [µmol/kg] (Calculated using seacarb afte...) Carbon, inorganic, dissolved DIC µmol/kg carbon C https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:27594 dissolved http://purl.obolibrary.org/obo/PATO_0001986 Molar Concentration Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 DIC [µmol/kg] (Calculated using seacarb afte...) Aragonite saturation state Omega Arg aragonite saturation state Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 Omega Arg (Calculated using seacarb afte...) Calcite saturation state Omega Cal Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 Omega Cal (Calculated using seacarb afte...) CurationLevelC Enhanced curation https://wiki.pangaea.de/wiki/Curation_levels citable Acid-base regulation Animalia Benthic animals Benthos Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) Crassostrea virginica Entire community Laboratory experiment Mollusca North Atlantic Ocean acidification Single species Temperate author10403 author10414 author107699 author107700 author118084 author118085 author118086 author21564 author22144 author22148 author22159 author22414 author22445 author24922 author27217 author28754 author29138 author29176 author32865 author34379 author39204 author39223 author48750 author51658 author55788 author56746 author59171 author59172 author59173 author63586 author69140 author92377 curlevel30 event3413403 geocode1600 geocode1601 inst11340 inst20185 inst20253 inst22836 journal13288 journal16590 license21 method14734 method557 method6426 method7423 param123368 param125247 param132112 param14025 param140721 param140722 param16048 param164532 param164533 param164534 param185520 param26954 param49312 param49313 param510679 param5125 param516455 param516456 param516457 param516458 param534368 param534369 param54293 param54294 param565352 param565353 param565354 param565355 param565356 param565357 param565358 param565359 param565360 param716 param717 param80114 param82111 param82364 param82365 param82366 param83476 param87073 param87459 param87460 param87461 param87463 param87464 param91410 param96278 pi118084 pi48750 project4173 ref124625 ref128879 ref140355 ref140356 ref31273 ref79258 term1073490 term1073493 term2606205 term2698012 term37764 term38253 term38477 term38841 term38845 term38851 term38855 term38857 term38859 term38860 term38869 term38874 term38878 term38891 term40625 term40646 term41013 term42659 term43298 term43299 term43821 term43834 term43972 term43996 term44025 term44030 term48166 term49384 term49506 term73928