Flipkens Gunter Gunter.Flipkens@uantwerpen.be University of Antwerp UAntwerp https://www.uantwerpen.be/en/ https://ror.org/008x57b05 Horoba Katharina University of Antwerp UAntwerp https://www.uantwerpen.be/en/ https://ror.org/008x57b05 Bostyn Kobe University of Antwerp UAntwerp https://www.uantwerpen.be/en/ https://ror.org/008x57b05 Geerts Luna J J University of Antwerp UAntwerp https://www.uantwerpen.be/en/ https://ror.org/008x57b05 Town Raewyn M University of Antwerp UAntwerp https://www.uantwerpen.be/en/ https://ror.org/008x57b05 Blust Ronny University of Antwerp UAntwerp https://www.uantwerpen.be/en/ https://ror.org/008x57b05 2026 Seawater carbonate chemistry and chronic toxicity of olivine in the marine amphipod Gammarus locusta dataset https://doi.org/10.1594/PANGAEA.995356 2026-06-09T07:00:22 Juvenile amphipods were exposed to natural Eastern Scheldt sediment (the Netherlands) mixed with various amounts of 3-99 µm olivine (expressed in % w/w) for 35 days. Various endpoints were measured including amphipod survival, growth, reproduction, and whole body element and TBARS concentrations. Furthermore, artificial seawater (ASW) temperature, pH, salinity, and concentrations of dissolved oxygen, various elements, dissolved organic carbon (DOC), and total alkalinity (TA) were analyzed. This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from Marine Data Archive (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2026-06-08. Flipkens Gunter Gunter.Flipkens@uantwerpen.be Horoba Katharina Bostyn Kobe Geerts Luna J J Town Raewyn M Blust Ronny 2023 Acute bioaccumulation and chronic toxicity of olivine in the marine amphipod Gammarus locusta journal article Aquatic Toxicology 262 https://doi.org/10.1016/j.aquatox.2023.106662 106662 Flipkens Gunter Gunter.Flipkens@uantwerpen.be Blust Ronny Town Raewyn M 2023 Acute bioaccumulation and chronic olivine toxicity data for the marine amphipod Gammarus locusta dataset MDA https://doi.org/10.14284/614 Nisumaa Anne-Marin annemarin@gmail.com Pesant Stephane pesant@ebi.ac.uk 0000-0002-4936-5209 Bellerby Richard G J Richard.Bellerby@niva.no http://www2.bjerknes.uib.no/pages.asp?pid=21&kat=5&lang=2 Delille Bruno bruno.delille@uliege.be 0000-0003-0502-8101 Middelburg Jack J jmiddelburg@nioo.knaw.nl 0000-0003-3601-9072 Orr James C j.orr@iaea.org 0000-0002-8707-7080 Riebesell Ulf uriebesell@geomar.de https://www.geomar.de/uriebesell/ 0000-0002-9442-452X Tyrrell Toby t.tyrrell@noc.soton.ac.uk Wolf-Gladrow Dieter A dieter.wolf-gladrow@awi.de https://www.awi.de/en/about-us/organisation/staff/single-view/dieter-wolf-gladrow.html 0000-0001-9531-8668 Gattuso Jean-Pierre jean-pierre.gattuso@imev-mer.fr 0000-0002-4533-4114 2010 EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification journal article Earth System Science Data 2(2) https://doi.org/10.5194/essd-2-167-2010 167-175 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 Brockmann Patrick Galdino Carolina Schindler Uwe uschindler@pangaea.de https://blog.thetaphi.de/ 0000-0002-1900-4162 Gazeau Frédéric frederic.gazeau@imev-mer.fr 0000-0001-8807-4597 2024 An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal journal article Earth System Science Data 16(8) https://doi.org/10.5194/essd-16-3771-2024 3771-3780 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 Hansson L Gattuso Jean-Pierre jean-pierre.gattuso@imev-mer.fr 0000-0002-4533-4114 2016 Data compilation on the biological response to ocean acidification: an update journal article Earth System Science Data 8(1) https://doi.org/10.5194/essd-8-79-2016 79-87 Gattuso Jean-Pierre jean-pierre.gattuso@imev-mer.fr 0000-0002-4533-4114 Epitalon Jean-Marie Lavigne Héloïse hlavigne@naturalsciences.be 0009-0006-6766-0638 Orr James James.Orr@lsce.ipsl.fr Gentili Bernard bernard.gentili@orange.fr http://omtab.obs-vlfr.fr/personnes/z_gent_be/gentili.php Hagens Mathilde 0000-0003-3980-1043 Hofmann Andreas Mueller Jens-Daniel Proye Aurélien Rae James 0000-0003-3904-2526 Soetaert Karline karline.soetaert@nioz.nl 0000-0003-4603-7100 2024 seacarb: seawater carbonate chemistry with R. R package version 3.3.3 other https://cran.r-project.org/web/packages/seacarb/index.html 4.0806 4.0806 51.4587 51.4587 4.0806 51.4587 OA-ICC Ocean Acidification International Coordination Centre https://www.iaea.org/services/oa-icc/science-and-collaboration/data-access-and-management International Atomic Energy Agency IAEA http://www.iaea.org https://ror.org/02zt1gg83 Eastern_Scheldt_estuary 51.4587 4.0806 5456 CC-BY-4.0 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/ Type of study Study type type Flipkens Gunter Gunter.Flipkens@uantwerpen.be Study type Species, unique identification Species UID species Flipkens Gunter Gunter.Flipkens@uantwerpen.be Species UID Species, unique identification (URI) Species UID (URI) species Flipkens Gunter Gunter.Flipkens@uantwerpen.be Species UID (URI) Species, unique identification (Semantic URI) Species UID (Semantic URI) species Flipkens Gunter Gunter.Flipkens@uantwerpen.be Species UID (Semantic URI) Olivine Ol % http://www.mindat.org/min-2983.html Dimensionless Ratio ψ Flipkens Gunter Gunter.Flipkens@uantwerpen.be Ol [%] Replicate Repl Flipkens Gunter Gunter.Flipkens@uantwerpen.be bucket Repl (bucket) Sex Sex sex Flipkens Gunter Gunter.Flipkens@uantwerpen.be Sex Length l mm Length L http://dbpedia.org/resource/Length Flipkens Gunter Gunter.Flipkens@uantwerpen.be metasomatic l [mm] (metasomatic) Day of experiment DOE day day Time T http://dbpedia.org/resource/Time Flipkens Gunter Gunter.Flipkens@uantwerpen.be DOE [day] Nickel Ni µmol/l nickel Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be water Ni [µmol/l] (water) Chromium Cr nmol/l chromium Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be water Cr [nmol/l] (water) Silicon Si µmol/l silicon Si https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:27573 Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be water Si [µmol/l] (water) Iron Fe µmol/l Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be water Fe [µmol/l] (water) Manganese Mn µmol/l manganese Mn https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:18291 Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be water Mn [µmol/l] (water) Zinc Zn µmol/l zinc Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be water Zn [µmol/l] (water) Copper Cu µmol/l copper Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be water Cu [µmol/l] (water) Cadmium Cd nmol/l cadmium Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be water Cd [nmol/l] (water) Lead Pb nmol/l lead Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be water Pb [nmol/l] (water) Survival Survival % Dimensionless Ratio ψ Flipkens Gunter Gunter.Flipkens@uantwerpen.be Survival [%] Female Female % female http://purl.obolibrary.org/obo/PATO_0000383 Dimensionless Ratio ψ Flipkens Gunter Gunter.Flipkens@uantwerpen.be Gravid Female [%] (Gravid) Embryos Embryos # Abundance or Count Flipkens Gunter Gunter.Flipkens@uantwerpen.be Embryos [#] Juvenile Juv # juvenile http://purl.obolibrary.org/obo/PATO_0001190 Abundance or Count Flipkens Gunter Gunter.Flipkens@uantwerpen.be Juv [#] Sex Sex sex Flipkens Gunter Gunter.Flipkens@uantwerpen.be ratio Sex (ratio) Food mass Food m mg Mass M http://dbpedia.org/resource/Mass Flipkens Gunter Gunter.Flipkens@uantwerpen.be uptake, per gammarid Food m [mg] (uptake, per gammarid) Juvenile Juv # juvenile http://purl.obolibrary.org/obo/PATO_0001190 Abundance or Count Flipkens Gunter Gunter.Flipkens@uantwerpen.be per female Juv [#] (per female) Embryos Embryos # Abundance or Count Flipkens Gunter Gunter.Flipkens@uantwerpen.be per_gravid_female Embryos [#] (per_gravid_female) Nickel Ni µmol/g nickel Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be Whole body Ni [µmol/g] (Whole body) Chromium Cr µmol/g chromium Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be Whole body Cr [µmol/g] (Whole body) Silicon Si µmol/g silicon Si https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:27573 Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be Whole body Si [µmol/g] (Whole body) Iron Fe µmol/g Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be Whole body Fe [µmol/g] (Whole body) Manganese Mn µmol/g manganese Mn https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:18291 Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be Whole body Mn [µmol/g] (Whole body) Copper Cu µmol/g copper Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be Whole body Cu [µmol/g] (Whole body) Thiobarbituric acid reactive substances, per wet mass TBARS/wm µmol/g thiobarbituric acid reactive substances TBARS https://en.wikipedia.org/wiki/TBARS wet mass Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be Whole body TBARS/wm [µmol/g] (Whole body) Sodium Na µmol/g sodium Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be Whole body Na [µmol/g] (Whole body) Magnesium Mg µmol/g magnesium Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be Whole body Mg [µmol/g] (Whole body) Potassium K µmol/g potassium K Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be Whole body K [µmol/g] (Whole body) Calcium Ca µmol/g calcium Ca https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:22984 Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be Whole body Ca [µmol/g] (Whole body) Temperature, water Temp °C Temperature Θ http://dbpedia.org/resource/Temperature water http://purl.obolibrary.org/obo/CHEBI_15377 Flipkens Gunter Gunter.Flipkens@uantwerpen.be Temp [°C] pH, total scale pHT Flipkens Gunter Gunter.Flipkens@uantwerpen.be pHT Salinity Sal salinity http://purl.obolibrary.org/obo/PATO_0085001 Flipkens Gunter Gunter.Flipkens@uantwerpen.be Sal Oxygen, dissolved DO mg/l oxygen O https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:25805 dissolved http://purl.obolibrary.org/obo/PATO_0001986 Density http://dbpedia.org/resource/Density Flipkens Gunter Gunter.Flipkens@uantwerpen.be DO [mg/l] Alkalinity, total AT µmol/l https://en.wikipedia.org/wiki/Alkalinity total https://www.oxforddictionaries.com/definition/american_english/total Molar Concentration Flipkens Gunter Gunter.Flipkens@uantwerpen.be AT [µmol/l] Carbonate system computation flag CSC flag Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 CSC flag Carbon dioxide CO2 µmol/kg carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 Molar Concentration Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 CO2 [µmol/kg] Fugacity of carbon dioxide (water) at sea surface temperature (wet air) fCO2water_SST_wet µatm fugacity https://en.wikipedia.org/wiki/Fugacity carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 water http://purl.obolibrary.org/obo/CHEBI_15377 Energy Density http://dbpedia.org/resource/Energy_density Force Per Area Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 fCO2water_SST_wet [µatm] Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pCO2water_SST_wet µatm partial pressure carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 water http://purl.obolibrary.org/obo/CHEBI_15377 Energy Density http://dbpedia.org/resource/Energy_density Force Per Area Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 pCO2water_SST_wet [µatm] Bicarbonate ion [HCO3]- µmol/kg Molar Concentration Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 [HCO3]- [µmol/kg] Carbonate ion [CO3]2- µmol/kg Molar Concentration Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 [CO3]2- [µmol/kg] Carbon, inorganic, dissolved DIC µmol/kg carbon C https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:27594 dissolved http://purl.obolibrary.org/obo/PATO_0001986 Molar Concentration Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 DIC [µmol/kg] Alkalinity, total AT µmol/kg total https://www.oxforddictionaries.com/definition/american_english/total Molar Concentration Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 AT [µmol/kg] Aragonite saturation state Omega Arg aragonite saturation state Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 Omega Arg Calcite saturation state Omega Cal Calculated using seacarb after Nisumaa et al. (2010) https://doi.org/10.5194/essd-2-167-2010 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 Omega Cal CurationLevelC Enhanced curation https://wiki.pangaea.de/wiki/Curation_levels citable Animalia Arthropoda Benthic animals Benthos Brackish waters Containers and aquaria (20-1000 L or < 1 m**2) Gammarus locusta Growth/Morphology Inorganic toxins Laboratory experiment Mortality/Survival North Atlantic Ocean alkalinity enhancement Other metabolic rates Other studied parameter or process Reproduction Single species Temperate author10403 author10414 author107699 author107700 author117852 author117853 author117854 author117855 author117856 author21564 author22144 author22148 author22159 author22414 author22445 author24922 author27217 author28754 author29138 author29176 author32865 author34379 author39204 author46177 author48750 author51658 author55788 author56746 author59171 author59172 author59173 author69140 curlevel30 event3410731 geocode1600 geocode1601 inst20253 inst21588 journal1383 journal16590 license21 method6426 param129269 param139414 param143493 param145984 param146360 param146364 param159423 param159424 param170708 param170709 param185520 param1873 param1874 param1875 param1876 param27072 param28117 param32559 param4594 param46427 param46490 param49312 param49313 param49320 param510679 param532999 param533000 param533001 param533006 param534369 param54293 param54294 param564691 param63 param64 param71455 param716 param717 param7659 param78394 param80114 param82111 param82364 param82365 param82366 param86991 param87073 pi117852 pi48750 project4173 ref124625 ref128879 ref140200 ref140201 ref31273 ref79258 term1073490 term1073493 term1073627 term1074133 term2606205 term2698012 term37606 term38253 term38477 term38478 term38494 term38520 term38521 term38563 term38841 term38845 term38850 term38855 term38857 term38860 term38869 term38874 term38876 term38886 term38887 term38890 term38899 term39424 term40134 term40559 term40561 term40646 term40665 term40848 term41047 term41048 term42038 term43298 term43350 term43792 term43794 term43821 term43834 term43863 term43892 term43972 term43975 term43996 term44025 term44030 term44256 term44323 term44373 term48166 term48982 term49384 term49506 term78027