Citation:

PANGAEA.995356

Name: Seawater carbonate chemistry and chronic toxicity of olivine in the marine amphipod Gammarus locusta
Published: 2026-06-09
License: https://creativecommons.org/licenses/by/4.0/
Keywords: Animalia; Arthropoda; Benthic animals; Benthos; Brackish waters; Containers and aquaria (20-1000 L or < 1 m**2); Gammarus locusta; Growth/Morphology; Inorganic toxins; Laboratory experiment; Mortality/Survival; North Atlantic; Ocean alkalinity enhancement; Other metabolic rates; Other studied parameter or process; Reproduction; Single species; Temperate

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Published: 2026-06-09 • DOI registered: 2026-07-08

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Abstract:

Juvenile amphipods were exposed to natural Eastern Scheldt sediment (the Netherlands) mixed with various amounts of 3-99 µm olivine (expressed in % w/w) for 35 days. Various endpoints were measured including amphipod survival, growth, reproduction, and whole body element and TBARS concentrations. Furthermore, artificial seawater (ASW) temperature, pH, salinity, and concentrations of dissolved oxygen, various elements, dissolved organic carbon (DOC), and total alkalinity (TA) were analyzed.

This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from Marine Data Archive (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2026-06-08.

Keyword(s):

Animalia; Arthropoda; Benthic animals; Benthos; Brackish waters; Containers and aquaria (20-1000 L or < 1 m**2); Gammarus locusta; Growth/Morphology; Inorganic toxins; Laboratory experiment; Mortality/Survival; North Atlantic; Ocean alkalinity enhancement; Other metabolic rates; Other studied parameter or process; Reproduction; Single species; Temperate

Related to:

Flipkens, Gunter; Horoba, Katharina; Bostyn, Kobe; Geerts, Luna J J; Town, Raewyn M; Blust, Ronny (2023): Acute bioaccumulation and chronic toxicity of olivine in the marine amphipod Gammarus locusta. Aquatic Toxicology, 262, 106662, https://doi.org/10.1016/j.aquatox.2023.106662

Source:

Flipkens, Gunter; Blust, Ronny; Town, Raewyn M (2023): Acute bioaccumulation and chronic olivine toxicity data for the marine amphipod Gammarus locusta [dataset]. MDA, https://doi.org/10.14284/614

References:

Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010

Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024

Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016

Related code / software:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Coverage:

Latitude: 51.458700 * Longitude: 4.080600

Event(s):

Eastern_Scheldt_estuary * Latitude: 51.458700 * Longitude: 4.080600

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Type of study	Study type		Flipkens, Gunter
2	Species, unique identification	Species UID		Flipkens, Gunter
3	Species, unique identification (URI)	Species UID (URI)		Flipkens, Gunter
4	Species, unique identification (Semantic URI)	Species UID (Semantic URI)		Flipkens, Gunter
5	Olivine	Ol	%	Flipkens, Gunter
6	Replicate	Repl		Flipkens, Gunter		bucket
7	Sex	Sex		Flipkens, Gunter
8	Length	l	mm	Flipkens, Gunter		metasomatic
9	Day of experiment	DOE	day	Flipkens, Gunter
10	Nickel	Ni	µmol/l	Flipkens, Gunter		water
11	Chromium	Cr	nmol/l	Flipkens, Gunter		water
12	Silicon	Si	µmol/l	Flipkens, Gunter		water
13	Iron	Fe	µmol/l	Flipkens, Gunter		water
14	Manganese	Mn	µmol/l	Flipkens, Gunter		water
15	Zinc	Zn	µmol/l	Flipkens, Gunter		water
16	Copper	Cu	µmol/l	Flipkens, Gunter		water
17	Cadmium	Cd	nmol/l	Flipkens, Gunter		water
18	Lead	Pb	nmol/l	Flipkens, Gunter		water
19	Survival	Survival	%	Flipkens, Gunter
20	Female	Female	%	Flipkens, Gunter		Gravid
21	Embryos	Embryos	#	Flipkens, Gunter
22	Juvenile	Juv	#	Flipkens, Gunter
23	Sex	Sex		Flipkens, Gunter		ratio
24	Food mass	Food m	mg	Flipkens, Gunter		uptake, per gammarid
25	Juvenile	Juv	#	Flipkens, Gunter		per female
26	Embryos	Embryos	#	Flipkens, Gunter		per_gravid_female
27	Nickel	Ni	µmol/g	Flipkens, Gunter		Whole body
28	Chromium	Cr	µmol/g	Flipkens, Gunter		Whole body
29	Silicon	Si	µmol/g	Flipkens, Gunter		Whole body
30	Iron	Fe	µmol/g	Flipkens, Gunter		Whole body
31	Manganese	Mn	µmol/g	Flipkens, Gunter		Whole body
32	Copper	Cu	µmol/g	Flipkens, Gunter		Whole body
33	Thiobarbituric acid reactive substances, per wet mass	TBARS/wm	µmol/g	Flipkens, Gunter		Whole body
34	Sodium	Na	µmol/g	Flipkens, Gunter		Whole body
35	Magnesium	Mg	µmol/g	Flipkens, Gunter		Whole body
36	Potassium	K	µmol/g	Flipkens, Gunter		Whole body
37	Calcium	Ca	µmol/g	Flipkens, Gunter		Whole body
38	Temperature, water	Temp	°C	Flipkens, Gunter
39	pH, total scale	pHT		Flipkens, Gunter
40	Salinity	Sal		Flipkens, Gunter
41	Oxygen, dissolved	DO	mg/l	Flipkens, Gunter
42	Alkalinity, total	AT	µmol/l	Flipkens, Gunter
43	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
44	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
45	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
46	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
47	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
48	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
49	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
50	Alkalinity, total	AT	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
51	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
52	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)

License:

Creative Commons Attribution 4.0 International (CC-BY-4.0)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

5456 data points

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