Hernández-Dauval Alejandro aledauval@gmail.com Universidad Austral de Chile https://ror.org/029ycp228 Valenzuela-Sánchez Andrés Zoological Society of London https://ror.org/03px4ez74 Lardies Marco A 0000-0003-3525-1830 Adolfo Ibáñez University UAI https://www.uai.cl/ https://ror.org/0326knt82 Bacigalupe Leonardo D Universidad Austral de Chile https://ror.org/029ycp228 2026 Seawater carbonate chemistry and physiology and survival of intertidal calcifiers in two contrasting upwelling systems dataset https://doi.org/10.1594/PANGAEA.992776 2026-03-05T09:25:11 In this study, we combined field CMR data and laboratory measurements to assess the physiological responses (metabolic rate and heart rate) and survival probability of individuals in two populations of intertidal mollusks, Chiton granosus and Scurria zebrina, in contrasting upwelling environments (i.e., semi‐permanent vs. seasonal). This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from Dryad (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2026-03-05. Hernández-Dauval Alejandro aledauval@gmail.com Valenzuela-Sánchez Andrés Lardies Marco A 0000-0003-3525-1830 Bacigalupe Leonardo D 2026 Physiology and Survival of Intertidal Calcifiers in Two Contrasting Upwelling Systems journal article Ecology and Evolution 16(2) https://doi.org/10.1002/ece3.73065 e73065 Hernández-Dauval Alejandro aledauval@gmail.com Valenzuela-Sánchez Andrés Lardies Marco A 0000-0003-3525-1830 Bacigalupe Leonardo D 2025 Physiological and survival data of intertidal mollusks from contrasting upwelling environments dataset Dryad https://doi.org/10.5061/DRYAD.RFJ6Q57PB Nisumaa Anne-Marin annemarin@gmail.com Pesant Stephane pesant@ebi.ac.uk 0000-0002-4936-5209 Bellerby Richard G J Richard.Bellerby@niva.no http://www2.bjerknes.uib.no/pages.asp?pid=21&kat=5&lang=2 Delille Bruno bruno.delille@uliege.be 0000-0003-0502-8101 Middelburg Jack J jmiddelburg@nioo.knaw.nl 0000-0003-3601-9072 Orr James C j.orr@iaea.org 0000-0002-8707-7080 Riebesell Ulf uriebesell@geomar.de https://www.geomar.de/uriebesell/ 0000-0002-9442-452X Tyrrell Toby t.tyrrell@noc.soton.ac.uk Wolf-Gladrow Dieter A dieter.wolf-gladrow@awi.de https://www.awi.de/en/about-us/organisation/staff/single-view/dieter-wolf-gladrow.html 0000-0001-9531-8668 Gattuso Jean-Pierre jean-pierre.gattuso@imev-mer.fr 0000-0002-4533-4114 2010 EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification journal article Earth System Science Data 2(2) https://doi.org/10.5194/essd-2-167-2010 167-175 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 Brockmann Patrick Galdino Carolina Schindler Uwe uschindler@pangaea.de https://blog.thetaphi.de/ 0000-0002-1900-4162 Gazeau Frédéric frederic.gazeau@imev-mer.fr 0000-0001-8807-4597 2024 An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal journal article Earth System Science Data 16(8) https://doi.org/10.5194/essd-16-3771-2024 3771-3780 Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 Hansson L Gattuso Jean-Pierre jean-pierre.gattuso@imev-mer.fr 0000-0002-4533-4114 2016 Data compilation on the biological response to ocean acidification: an update journal article Earth System Science Data 8(1) https://doi.org/10.5194/essd-8-79-2016 79-87 Gattuso Jean-Pierre jean-pierre.gattuso@imev-mer.fr 0000-0002-4533-4114 Epitalon Jean-Marie Lavigne Héloïse hlavigne@naturalsciences.be 0009-0006-6766-0638 Orr James James.Orr@lsce.ipsl.fr Gentili Bernard bernard.gentili@orange.fr http://omtab.obs-vlfr.fr/personnes/z_gent_be/gentili.php Hagens Mathilde 0000-0003-3980-1043 Hofmann Andreas Mueller Jens-Daniel Proye Aurélien Rae James 0000-0003-3904-2526 Soetaert Karline karline.soetaert@nioz.nl 0000-0003-4603-7100 2024 seacarb: seawater carbonate chemistry with R. R package version 3.3.3 other https://cran.r-project.org/web/packages/seacarb/index.html -71.7166 -71.6833 -33.1833 -30.7166 -71.69995 -31.94995 OA-ICC Ocean Acidification International Coordination Centre https://www.iaea.org/services/oa-icc/science-and-collaboration/data-access-and-management International Atomic Energy Agency IAEA http://www.iaea.org https://ror.org/02zt1gg83 Punta_Lengua_de_Vaca -30.7166 -71.6833 Experiment EXP Quintay_Bay -33.1833 -71.7166 Experiment EXP 75572 CC-BY-4.0 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/ Event label Event Hernández-Dauval Alejandro aledauval@gmail.com Event Type of study Study type type Hernández-Dauval Alejandro aledauval@gmail.com Study type Location Location location Hernández-Dauval Alejandro aledauval@gmail.com Location Date Date http://en.wikipedia.org/wiki/ISO_8601 Hernández-Dauval Alejandro aledauval@gmail.com Date Species, unique identification Species UID species Hernández-Dauval Alejandro aledauval@gmail.com Species UID Species, unique identification (URI) Species UID (URI) species Hernández-Dauval Alejandro aledauval@gmail.com Species UID (URI) Species, unique identification (Semantic URI) Species UID (Semantic URI) species Hernández-Dauval Alejandro aledauval@gmail.com Species UID (Semantic URI) Shell length Shell l mm Length L http://dbpedia.org/resource/Length Hernández-Dauval Alejandro aledauval@gmail.com Shell l [mm] Shell width Shell w mm Length L http://dbpedia.org/resource/Length Hernández-Dauval Alejandro aledauval@gmail.com Shell w [mm] Shell height Shell h mm Length L http://dbpedia.org/resource/Length Hernández-Dauval Alejandro aledauval@gmail.com Shell h [mm] Buoyant mass M buoyant g Mass M http://dbpedia.org/resource/Mass Hernández-Dauval Alejandro aledauval@gmail.com M buoyant [g] Respiration rate, oxygen Resp O2 mg/g/h respiration rate http://www.oxfordreference.com/view/10.1093/oi/authority.20110803100415939?rskey=tF1NrR&result=2 oxygen O https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:25805 Frequency http://dbpedia.org/resource/Frequency Hernández-Dauval Alejandro aledauval@gmail.com Resp O2 [mg/g/h] Heart beat rate Heart beat #/min Hernández-Dauval Alejandro aledauval@gmail.com Heart beat [#/min] History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -nov_19 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -dec_19 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -jan_20 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -feb_20 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -mar_20 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -apr_20 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -may_20 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -jun_20 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -jul_20 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -aug_20 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -sep_20 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -oct_20 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -nov_20 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -dec_20 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -jan_21 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -feb_21 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -mar_21 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -apr_21 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -may_21 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -jun_21 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -jul_21 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -aug_21 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -sep_21 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -oct_21 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -nov_21 History (Capture-mark-recapture histor...) History History Hernández-Dauval Alejandro aledauval@gmail.com Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -dec_21 History (Capture-mark-recapture histor...) Salinity Sal salinity http://purl.obolibrary.org/obo/PATO_0085001 Hernández-Dauval Alejandro aledauval@gmail.com Sal Salinity, standard deviation Sal std dev ± standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Hernández-Dauval Alejandro aledauval@gmail.com Sal std dev [±] pH, NBS scale pH NBS Hernández-Dauval Alejandro aledauval@gmail.com pH NBS pH, standard deviation pH std dev ± standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Hernández-Dauval Alejandro aledauval@gmail.com pH std dev [±] Alkalinity, total AT µmol/kg total https://www.oxforddictionaries.com/definition/american_english/total Molar Concentration Hernández-Dauval Alejandro aledauval@gmail.com AT [µmol/kg] Alkalinity, total, standard deviation AT std dev ± total https://www.oxforddictionaries.com/definition/american_english/total standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Hernández-Dauval Alejandro aledauval@gmail.com AT std dev [±] Carbonate ion [CO3]2- µmol/kg Molar Concentration Calculated using CO2SYS Hernández-Dauval Alejandro aledauval@gmail.com [CO3]2- [µmol/kg] Carbonate ion, standard deviation [CO3]2- std dev ± standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated using CO2SYS Hernández-Dauval Alejandro aledauval@gmail.com [CO3]2- std dev [±] Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pCO2water_SST_wet µatm partial pressure carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 water http://purl.obolibrary.org/obo/CHEBI_15377 Energy Density http://dbpedia.org/resource/Energy_density Force Per Area Calculated using CO2SYS Hernández-Dauval Alejandro aledauval@gmail.com pCO2water_SST_wet [µatm] Partial pressure of carbon dioxide, standard deviation pCO2 std dev ± partial pressure carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated using CO2SYS Hernández-Dauval Alejandro aledauval@gmail.com pCO2 std dev [±] Calcite saturation state Omega Cal Calculated using CO2SYS Hernández-Dauval Alejandro aledauval@gmail.com Omega Cal Calcite saturation state, standard deviation Omega Cal std dev ± standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated using CO2SYS Hernández-Dauval Alejandro aledauval@gmail.com Omega Cal std dev [±] Aragonite saturation state Omega Arg aragonite saturation state Calculated using CO2SYS Hernández-Dauval Alejandro aledauval@gmail.com Omega Arg Aragonite saturation state, standard deviation Omega Arg std dev ± aragonite saturation state standard deviation std dev https://en.wikipedia.org/wiki/Standard_deviation Calculated using CO2SYS Hernández-Dauval Alejandro aledauval@gmail.com Omega Arg std dev [±] Temperature, water Temp °C Temperature Θ http://dbpedia.org/resource/Temperature water http://purl.obolibrary.org/obo/CHEBI_15377 Hernández-Dauval Alejandro aledauval@gmail.com Temp [°C] Temperature, water Temp °C Temperature Θ http://dbpedia.org/resource/Temperature water http://purl.obolibrary.org/obo/CHEBI_15377 Hernández-Dauval Alejandro aledauval@gmail.com min Temp [°C] (min) Temperature, water Temp °C Temperature Θ http://dbpedia.org/resource/Temperature water http://purl.obolibrary.org/obo/CHEBI_15377 Hernández-Dauval Alejandro aledauval@gmail.com max Temp [°C] (max) Carbonate system computation flag CSC flag Calculated using CO2SYS Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 CSC flag pH, total scale pHT Calculated using CO2SYS Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 pHT Carbon dioxide CO2 µmol/kg carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 Molar Concentration Calculated using CO2SYS Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 CO2 [µmol/kg] Fugacity of carbon dioxide (water) at sea surface temperature (wet air) fCO2water_SST_wet µatm fugacity https://en.wikipedia.org/wiki/Fugacity carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 water http://purl.obolibrary.org/obo/CHEBI_15377 Energy Density http://dbpedia.org/resource/Energy_density Force Per Area Calculated using CO2SYS Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 fCO2water_SST_wet [µatm] Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pCO2water_SST_wet µatm partial pressure carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526 water http://purl.obolibrary.org/obo/CHEBI_15377 Energy Density http://dbpedia.org/resource/Energy_density Force Per Area Calculated using CO2SYS Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 pCO2water_SST_wet [µatm] Bicarbonate ion [HCO3]- µmol/kg Molar Concentration Calculated using CO2SYS Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 [HCO3]- [µmol/kg] Carbonate ion [CO3]2- µmol/kg Molar Concentration Calculated using CO2SYS Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 [CO3]2- [µmol/kg] Carbon, inorganic, dissolved DIC µmol/kg carbon C https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:27594 dissolved http://purl.obolibrary.org/obo/PATO_0001986 Molar Concentration Calculated using CO2SYS Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 DIC [µmol/kg] Aragonite saturation state Omega Arg aragonite saturation state Calculated using CO2SYS Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 Omega Arg Calcite saturation state Omega Cal Calculated using CO2SYS Yang Yan yangyan@xmu.edu.cn http://mel.xmu.edu.cn/en/ 0000-0003-4900-5606 Omega Cal CurationLevelC Enhanced curation https://wiki.pangaea.de/wiki/Curation_levels citable Animalia Benthic animals Benthos Chiton granosus Coast and continental shelf Field observation Growth/Morphology Mollusca Mortality/Survival Ocean acidification Other studied parameter or process Respiration Scurria zebrina Single species South Pacific Temperate author10403 author10414 author107699 author107700 author115593 author115594 author21564 author22144 author22148 author22159 author22414 author22445 author24922 author27217 author28754 author29138 author29176 author32865 author34379 author39204 author48750 author51046 author51658 author55788 author56746 author59171 author59172 author59173 author62032 author69140 curlevel30 event3359452 event3359453 geocode1600 geocode1601 inst20253 inst22491 inst22640 inst22641 journal16590 journal16724 license21 method6506 method7423 param120549 param131709 param149020 param152481 param1720 param172927 param185520 param26954 param49312 param49313 param510679 param534368 param534369 param538151 param54293 param54294 param6400 param716 param717 param80114 param82111 param82364 param82365 param82366 param83476 param84559 param87073 param87459 param87461 param87463 param87464 param91410 pi115593 pi48750 project4173 ref124625 ref128879 ref138201 ref138203 ref31273 ref79258 term1073490 term1073493 term2606205 term2663532 term2698012 term37602 term37764 term38253 term38477 term38494 term38497 term38843 term38851 term38855 term38857 term38860 term38869 term38874 term38878 term38886 term38887 term39424 term40646 term40891 term43298 term43821 term43834 term43838 term43863 term43892 term43972 term44030 term48166 term49384 term49506 term73928 term77247 term77248