Citation:

PANGAEA.992776

Name: Seawater carbonate chemistry and physiology and survival of intertidal calcifiers in two contrasting upwelling systems
Published: 2026-03-05
License: https://creativecommons.org/licenses/by/4.0/
Keywords: Animalia; Benthic animals; Benthos; Chiton granosus; Coast and continental shelf; Field observation; Growth/Morphology; Mollusca; Mortality/Survival; Ocean acidification; Other studied parameter or process; Respiration; Scurria zebrina; Single species; South Pacific; Temperate

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Published: 2026-03-05 • DOI registered: 2026-04-04

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Abstract:

In this study, we combined field CMR data and laboratory measurements to assess the physiological responses (metabolic rate and heart rate) and survival probability of individuals in two populations of intertidal mollusks, Chiton granosus and Scurria zebrina, in contrasting upwelling environments (i.e., semi‐permanent vs. seasonal).

This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from Dryad (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2026-03-05.

Keyword(s):

Animalia; Benthic animals; Benthos; Chiton granosus; Coast and continental shelf; Field observation; Growth/Morphology; Mollusca; Mortality/Survival; Ocean acidification; Other studied parameter or process; Respiration; Scurria zebrina; Single species; South Pacific; Temperate

Related to:

Hernández-Dauval, Alejandro; Valenzuela-Sánchez, Andrés; Lardies, Marco A; Bacigalupe, Leonardo D (2026): Physiology and Survival of Intertidal Calcifiers in Two Contrasting Upwelling Systems. Ecology and Evolution, 16(2), e73065, https://doi.org/10.1002/ece3.73065

Source:

Hernández-Dauval, Alejandro; Valenzuela-Sánchez, Andrés; Lardies, Marco A; Bacigalupe, Leonardo D (2025): Physiological and survival data of intertidal mollusks from contrasting upwelling environments [dataset]. Dryad, https://doi.org/10.5061/DRYAD.RFJ6Q57PB

References:

Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010

Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024

Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016

Related code / software:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Coverage:

Median Latitude: -31.949950 * Median Longitude: -71.699950 * South-bound Latitude: -33.183300 * West-bound Longitude: -71.716600 * North-bound Latitude: -30.716600 * East-bound Longitude: -71.683300

Event(s):

Punta_Lengua_de_Vaca * Latitude: -30.716600 * Longitude: -71.683300 * Method/Device: Experiment (EXP)

Quintay_Bay * Latitude: -33.183300 * Longitude: -71.716600 * Method/Device: Experiment (EXP)

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Event label	Event		Hernández-Dauval, Alejandro
2	Type of study	Study type		Hernández-Dauval, Alejandro
3	Location	Location		Hernández-Dauval, Alejandro
4	Date	Date		Hernández-Dauval, Alejandro
5	Species, unique identification	Species UID		Hernández-Dauval, Alejandro
6	Species, unique identification (URI)	Species UID (URI)		Hernández-Dauval, Alejandro
7	Species, unique identification (Semantic URI)	Species UID (Semantic URI)		Hernández-Dauval, Alejandro
8	Shell length	Shell l	mm	Hernández-Dauval, Alejandro
9	Shell width	Shell w	mm	Hernández-Dauval, Alejandro
10	Shell height	Shell h	mm	Hernández-Dauval, Alejandro
11	Buoyant mass	M buoyant	g	Hernández-Dauval, Alejandro
12	Respiration rate, oxygen	Resp O2	mg/g/h	Hernández-Dauval, Alejandro
13	Heart beat rate	Heart beat	#/min	Hernández-Dauval, Alejandro
14	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -nov_19
15	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -dec_19
16	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -jan_20
17	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -feb_20
18	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -mar_20
19	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -apr_20
20	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -may_20
21	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -jun_20
22	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -jul_20
23	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -aug_20
24	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -sep_20
25	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -oct_20
26	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -nov_20
27	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -dec_20
28	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -jan_21
29	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -feb_21
30	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -mar_21
31	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -apr_21
32	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -may_21
33	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -jun_21
34	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -jul_21
35	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -aug_21
36	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -sep_21
37	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -oct_21
38	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -nov_21
39	History	History		Hernández-Dauval, Alejandro		Capture-mark-recapture history, with presence (1) or absence (0) of each individual at each sampling occasion -dec_21
40	Salinity	Sal		Hernández-Dauval, Alejandro
41	Salinity, standard deviation	Sal std dev	±	Hernández-Dauval, Alejandro
42	pH, NBS scale	pH NBS		Hernández-Dauval, Alejandro
43	pH, standard deviation	pH std dev	±	Hernández-Dauval, Alejandro
44	Alkalinity, total	AT	µmol/kg	Hernández-Dauval, Alejandro
45	Alkalinity, total, standard deviation	AT std dev	±	Hernández-Dauval, Alejandro
46	Carbonate ion	[CO3]2-	µmol/kg	Hernández-Dauval, Alejandro	Calculated using CO2SYS
47	Carbonate ion, standard deviation	[CO3]2- std dev	±	Hernández-Dauval, Alejandro	Calculated using CO2SYS
48	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Hernández-Dauval, Alejandro	Calculated using CO2SYS
49	Partial pressure of carbon dioxide, standard deviation	pCO2 std dev	±	Hernández-Dauval, Alejandro	Calculated using CO2SYS
50	Calcite saturation state	Omega Cal		Hernández-Dauval, Alejandro	Calculated using CO2SYS
51	Calcite saturation state, standard deviation	Omega Cal std dev	±	Hernández-Dauval, Alejandro	Calculated using CO2SYS
52	Aragonite saturation state	Omega Arg		Hernández-Dauval, Alejandro	Calculated using CO2SYS
53	Aragonite saturation state, standard deviation	Omega Arg std dev	±	Hernández-Dauval, Alejandro	Calculated using CO2SYS
54	Temperature, water	Temp	°C	Hernández-Dauval, Alejandro
55	Temperature, water	Temp	°C	Hernández-Dauval, Alejandro		min
56	Temperature, water	Temp	°C	Hernández-Dauval, Alejandro		max
57	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using CO2SYS
58	pH, total scale	pHT		Yang, Yan	Calculated using CO2SYS
59	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using CO2SYS
60	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using CO2SYS
61	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using CO2SYS
62	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using CO2SYS
63	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using CO2SYS
64	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	Calculated using CO2SYS
65	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using CO2SYS
66	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using CO2SYS

License:

Creative Commons Attribution 4.0 International (CC-BY-4.0)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

75572 data points

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