/* DATA DESCRIPTION:
Citation:	Ashey, Jill; Scucchia, Federica; Huffmyer, Ariana S; Putnam, H M; Mass, Tali (2025): Seawater carbonate chemistry and survival and settlement of Pocillopora acuta across temperature and OA conditions [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.987162
Abstract:	Here, we exposed the early life stages of Pocillopora acuta in Kāne'ohe Bay, Hawai'i, USA, a common reef-building coral throughout the Pacific, to projected ocean warming and acidification scenarios. We measured ecological, physiological, biomineralisation and molecular responses across the critical transition from larvae to newly settled recruits following 6 days of exposure to diel fluctuations in temperature and pH in Control (26.8°C–27.9°C, 7.82–7.96 pHTotal), Mid (28.4°C–29.5°C, 7.65–7.79 pHTotal) and High conditions (30.2°C–31.5°C, 7.44–7.59 pHTotal). 
	This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from github (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2025-11-04.
Keyword(s):	Animalia; Cnidaria; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Gene expression (incl. proteomics); Laboratory experiment; Mortality/Survival; North Pacific; Pelagos; Pocillopora acuta; Reproduction; Single species; Temperature; Tropical; Zooplankton
Related to:	Ashey, Jill; Scucchia, Federica; Huffmyer, Ariana S; Putnam, H M; Mass, Tali (2025): Thermal and Acidification Gradients Reveal Tolerance Thresholds in Pocillopora acuta Recruits. Molecular Ecology, 34(20), e70116, https://doi.org/10.1111/mec.70116
Source:	GitHub - fscucchia/Pacu_Warm_OA_Hawaii: Electronic notebook for "Thermal and Acidification Gradients Reveal Tolerance Thresholds in Pocillopora acuta Recruits" [webpage]. https://github.com/fscucchia/Pacu_Warm_OA_Hawaii
References:	Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
	Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024
	Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016
Related code / software:	Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Project(s):	Ocean Acidification International Coordination Centre (OA-ICC) (URI: https://www.iaea.org/services/oa-icc/science-and-collaboration/data-access-and-management)
Coverage:	LATITUDE: 21.434000 * LONGITUDE: -157.787000
	DATE/TIME START: 2022-06-11T00:00:00 * DATE/TIME END: 2022-06-11T00:00:00
Event(s):	Coconut_Island_OA * LATITUDE: 21.434000 * LONGITUDE: -157.787000 * DATE/TIME: 2022-06-11T00:00:00
Parameter(s):	Type of study (Study type) * PI: Ashey, Jill (jillashey@uri.edu)
	Species, unique identification (Species UID) * PI: Ashey, Jill (jillashey@uri.edu)
	Species, unique identification (URI) (Species UID (URI)) * PI: Ashey, Jill (jillashey@uri.edu)
	Species, unique identification (Semantic URI) (Species UID (Semantic URI)) * PI: Ashey, Jill (jillashey@uri.edu)
	Treatment (Treat) * PI: Ashey, Jill (jillashey@uri.edu)
	Identification (ID) * PI: Ashey, Jill (jillashey@uri.edu) * COMMENT: chamber
	Larvae, swimming [#] (Larvae swim) * PI: Ashey, Jill (jillashey@uri.edu)
	Larvae, settled [#] (Larvae sett) * PI: Ashey, Jill (jillashey@uri.edu)
	Larvae, alive [#] (Larvae alive) * PI: Ashey, Jill (jillashey@uri.edu) * COMMENT: swimming + settlers
	Settlement [%] (Settlem) * PI: Ashey, Jill (jillashey@uri.edu) * COMMENT: settle capacity=settled primary polyps relative to the swimming larvae + settled primary polyps alive
	Salinity (Sal) * PI: Ashey, Jill (jillashey@uri.edu)
	Salinity, standard error [±] (Sal std e) * PI: Ashey, Jill (jillashey@uri.edu)
	Temperature, water [°C] (Temp) * PI: Ashey, Jill (jillashey@uri.edu)
	Temperature, water, standard error [±] (T std e) * PI: Ashey, Jill (jillashey@uri.edu)
	pH, total scale (pHT) * PI: Ashey, Jill (jillashey@uri.edu)
	pH, standard error [±] (pH std e) * PI: Ashey, Jill (jillashey@uri.edu) * COMMENT: total scale
	Carbon dioxide [µmol/kg] (CO2) * PI: Ashey, Jill (jillashey@uri.edu)
	Carbon dioxide, standard error [±] (CO2 std e) * PI: Ashey, Jill (jillashey@uri.edu)
	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) [µatm] (pCO2water_SST_wet) * PI: Ashey, Jill (jillashey@uri.edu)
	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard error [±] (pCO2water_SST_wet std e) * PI: Ashey, Jill (jillashey@uri.edu)
	Bicarbonate ion [µmol/kg] ([HCO3]-) * PI: Ashey, Jill (jillashey@uri.edu)
	Bicarbonate ion, standard error [±] ([HCO3]- std e) * PI: Ashey, Jill (jillashey@uri.edu)
	Carbonate ion [µmol/kg] ([CO3]2-) * PI: Ashey, Jill (jillashey@uri.edu)
	Carbonate ion, standard error [±] ([CO3]2- std e) * PI: Ashey, Jill (jillashey@uri.edu)
	Carbon, inorganic, dissolved [µmol/kg] (DIC) * PI: Ashey, Jill (jillashey@uri.edu)
	Carbon, inorganic, dissolved, standard error [±] (DIC std e) * PI: Ashey, Jill (jillashey@uri.edu)
	Alkalinity, total [µmol/kg] (AT) * PI: Ashey, Jill (jillashey@uri.edu)
	Alkalinity, total, standard error [±] (AT std e) * PI: Ashey, Jill (jillashey@uri.edu)
	Aragonite saturation state (Omega Arg) * PI: Ashey, Jill (jillashey@uri.edu)
	Aragonite saturation state, standard error [±] (Omega Arg std e) * PI: Ashey, Jill (jillashey@uri.edu)
	Carbonate system computation flag (CSC flag) * PI: Yang, Yan (https://orcid.org/0000-0003-4900-5606, yangyan@xmu.edu.cn, http://mel.xmu.edu.cn/en/) * METHOD/DEVICE: Calculated using seacarb after Nisumaa et al. (2010) (URI: https://doi.org/10.5194/essd-2-167-2010)
	Carbon dioxide [µmol/kg] (CO2) * PI: Yang, Yan (https://orcid.org/0000-0003-4900-5606, yangyan@xmu.edu.cn, http://mel.xmu.edu.cn/en/) * METHOD/DEVICE: Calculated using seacarb after Nisumaa et al. (2010) (URI: https://doi.org/10.5194/essd-2-167-2010)
	Fugacity of carbon dioxide (water) at sea surface temperature (wet air) [µatm] (fCO2water_SST_wet) * PI: Yang, Yan (https://orcid.org/0000-0003-4900-5606, yangyan@xmu.edu.cn, http://mel.xmu.edu.cn/en/) * METHOD/DEVICE: Calculated using seacarb after Nisumaa et al. (2010) (URI: https://doi.org/10.5194/essd-2-167-2010)
	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) [µatm] (pCO2water_SST_wet) * PI: Yang, Yan (https://orcid.org/0000-0003-4900-5606, yangyan@xmu.edu.cn, http://mel.xmu.edu.cn/en/) * METHOD/DEVICE: Calculated using seacarb after Nisumaa et al. (2010) (URI: https://doi.org/10.5194/essd-2-167-2010)
	Bicarbonate ion [µmol/kg] ([HCO3]-) * PI: Yang, Yan (https://orcid.org/0000-0003-4900-5606, yangyan@xmu.edu.cn, http://mel.xmu.edu.cn/en/) * METHOD/DEVICE: Calculated using seacarb after Nisumaa et al. (2010) (URI: https://doi.org/10.5194/essd-2-167-2010)
	Carbonate ion [µmol/kg] ([CO3]2-) * PI: Yang, Yan (https://orcid.org/0000-0003-4900-5606, yangyan@xmu.edu.cn, http://mel.xmu.edu.cn/en/) * METHOD/DEVICE: Calculated using seacarb after Nisumaa et al. (2010) (URI: https://doi.org/10.5194/essd-2-167-2010)
	Carbon, inorganic, dissolved [µmol/kg] (DIC) * PI: Yang, Yan (https://orcid.org/0000-0003-4900-5606, yangyan@xmu.edu.cn, http://mel.xmu.edu.cn/en/) * METHOD/DEVICE: Calculated using seacarb after Nisumaa et al. (2010) (URI: https://doi.org/10.5194/essd-2-167-2010)
	Aragonite saturation state (Omega Arg) * PI: Yang, Yan (https://orcid.org/0000-0003-4900-5606, yangyan@xmu.edu.cn, http://mel.xmu.edu.cn/en/) * METHOD/DEVICE: Calculated using seacarb after Nisumaa et al. (2010) (URI: https://doi.org/10.5194/essd-2-167-2010)
	Calcite saturation state (Omega Cal) * PI: Yang, Yan (https://orcid.org/0000-0003-4900-5606, yangyan@xmu.edu.cn, http://mel.xmu.edu.cn/en/) * METHOD/DEVICE: Calculated using seacarb after Nisumaa et al. (2010) (URI: https://doi.org/10.5194/essd-2-167-2010)
License:	Creative Commons Attribution 4.0 International (CC-BY-4.0) (URI: https://creativecommons.org/licenses/by/4.0/)
Status:	Curation Level: Enhanced curation (URI: https://wiki.pangaea.de/wiki/Curation_levels)
Size:	333 data points
*/
Study type	Species UID	Species UID (URI)	Species UID (Semantic URI)	Treat	ID (chamber)	Larvae swim [#]	Larvae sett [#]	Larvae alive [#] (swimming + settlers)	Settlem [%] (settle capacity=settled prima...)	Sal	Sal std e [±]	Temp [°C]	T std e [±]	pHT	pH std e [±] (total scale)	CO2 [µmol/kg]	CO2 std e [±]	pCO2water_SST_wet [µatm]	pCO2water_SST_wet std e [±]	[HCO3]- [µmol/kg]	[HCO3]- std e [±]	[CO3]2- [µmol/kg]	[CO3]2- std e [±]	DIC [µmol/kg]	DIC std e [±]	AT [µmol/kg]	AT std e [±]	Omega Arg	Omega Arg std e [±]	CSC flag	CO2 [µmol/kg]	fCO2water_SST_wet [µatm]	pCO2water_SST_wet [µatm]	[HCO3]- [µmol/kg]	[CO3]2- [µmol/kg]	DIC [µmol/kg]	Omega Arg	Omega Cal
laboratory	Pocillopora acuta	https://www.marinespecies.org/aphia.php?p=taxdetails&id=759099	urn:lsid:marinespecies.org:taxname:759099	control	1	5	16	21	76	35.02	0.05	27.36	0.06	7.89	0.01	15.45	0.23	578.66	8.81	1778.71	4.33	163.20	1.68	1957.36	3.06	2182.83	1.61	2.62	0.03	8	15.40	575.06	576.85	1779.17	163.00	1957.57	2.62	3.94
laboratory	Pocillopora acuta	https://www.marinespecies.org/aphia.php?p=taxdetails&id=759099	urn:lsid:marinespecies.org:taxname:759099	control	2	4	17	21	81	35.02	0.05	27.36	0.06	7.89	0.01	15.45	0.23	578.66	8.81	1778.71	4.33	163.20	1.68	1957.36	3.06	2182.83	1.61	2.62	0.03	8	15.40	575.06	576.85	1779.17	163.00	1957.57	2.62	3.94
laboratory	Pocillopora acuta	https://www.marinespecies.org/aphia.php?p=taxdetails&id=759099	urn:lsid:marinespecies.org:taxname:759099	control	3	4	16	20	80	35.02	0.05	27.36	0.06	7.89	0.01	15.45	0.23	578.66	8.81	1778.71	4.33	163.20	1.68	1957.36	3.06	2182.83	1.61	2.62	0.03	8	15.40	575.06	576.85	1779.17	163.00	1957.57	2.62	3.94
laboratory	Pocillopora acuta	https://www.marinespecies.org/aphia.php?p=taxdetails&id=759099	urn:lsid:marinespecies.org:taxname:759099	mid pCO2	1	3	15	18	83	34.97	0.07	29.00	0.06	7.71	0.01	23.88	0.43	929.85	16.84	1881.94	4.36	121.94	1.65	2027.76	3.30	2182.95	1.68	1.98	0.03	8	23.78	922.97	925.79	1882.58	121.67	2028.03	1.97	2.95
laboratory	Pocillopora acuta	https://www.marinespecies.org/aphia.php?p=taxdetails&id=759099	urn:lsid:marinespecies.org:taxname:759099	mid pCO2	2	3	16	19	84	34.97	0.07	29.00	0.06	7.71	0.01	23.88	0.43	929.85	16.84	1881.94	4.36	121.94	1.65	2027.76	3.30	2182.95	1.68	1.98	0.03	8	23.78	922.97	925.79	1882.58	121.67	2028.03	1.97	2.95
laboratory	Pocillopora acuta	https://www.marinespecies.org/aphia.php?p=taxdetails&id=759099	urn:lsid:marinespecies.org:taxname:759099	mid pCO2	3	4	17	21	81	34.97	0.07	29.00	0.06	7.71	0.01	23.88	0.43	929.85	16.84	1881.94	4.36	121.94	1.65	2027.76	3.30	2182.95	1.68	1.98	0.03	8	23.78	922.97	925.79	1882.58	121.67	2028.03	1.97	2.95
laboratory	Pocillopora acuta	https://www.marinespecies.org/aphia.php?p=taxdetails&id=759099	urn:lsid:marinespecies.org:taxname:759099	high pCO2	1	3	14	17	82	35.04	0.07	30.92	0.06	7.51	0.01	39.18	0.69	1594.48	28.45	1980.20	3.33	85.35	1.39	2104.73	2.87	2190.15	2.16	1.40	0.02	8	39.03	1583.44	1588.16	1980.80	85.10	2104.92	1.39	2.07
laboratory	Pocillopora acuta	https://www.marinespecies.org/aphia.php?p=taxdetails&id=759099	urn:lsid:marinespecies.org:taxname:759099	high pCO2	2	3	14	17	82	35.04	0.07	30.92	0.06	7.51	0.01	39.18	0.69	1594.48	28.45	1980.20	3.33	85.35	1.39	2104.73	2.87	2190.15	2.16	1.40	0.02	8	39.03	1583.44	1588.16	1980.80	85.10	2104.92	1.39	2.07
laboratory	Pocillopora acuta	https://www.marinespecies.org/aphia.php?p=taxdetails&id=759099	urn:lsid:marinespecies.org:taxname:759099	high pCO2	3	2	13	15	87	35.04	0.07	30.92	0.06	7.51	0.01	39.18	0.69	1594.48	28.45	1980.20	3.33	85.35	1.39	2104.73	2.87	2190.15	2.16	1.40	0.02	8	39.03	1583.44	1588.16	1980.80	85.10	2104.92	1.39	2.07