de.pangaea.dataset984692 und dataset PANGAEA
info@pangaea.de
https://www.pangaea.de/ information pointOfContact 2026-09-15T06:14:07Z https://doi.pangaea.de/10.1594/PANGAEA.984692 <gco:CharacterString>Seawater carbonate chemistry and Acartia tonsa experimental evolution epigenetics</gco:CharacterString> 2025-09-02T07:06:03 publication https://doi.org/10.1594/PANGAEA.984692 Brennan, Reid S
rbrennan@geomar.de
https://orcid.org/0000-0001-7678-564X information author deMayo, James A author Finiguerra, Michael B https://orcid.org/0000-0003-4216-0785 information author Baumann, Hannes
hannes.baumann@stonybrook.edu
https://orcid.org/0000-0002-4039-4230 information author Dam, Hans G
hans.dam@uconn.edu
https://orcid.org/0000-0001-6121-5038 information author Pespeni, Melissa H
mpespeni@uvm.edu
https://orcid.org/0000-0001-5447-6678 information author PANGAEA
info@pangaea.de
https://www.pangaea.de/ information publisher tableDigital We experimentally evolved the foundational marine copepod Acartia tonsa for 25 generations under ocean acidification, warming, and their combination and then measured epigenomic, genomic, and transcriptomic responses. This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from the PANGAEA dataset (see Source). In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2025-09-02. completed Brennan, Reid S
rbrennan@geomar.de
https://orcid.org/0000-0001-7678-564X information principalInvestigator Yang, Yan
yangyan@xmu.edu.cn
https://orcid.org/0000-0003-4900-5606 information principalInvestigator Acartia tonsa Animalia Arthropoda Bottles or small containers/Aquaria (<20 L) Coast and continental shelf Gene expression (incl. proteomics) Laboratory experiment North Atlantic Ocean acidification Other studied parameter or process Pelagos Single species Temperate Temperature Zooplankton theme <gco:CharacterString>PANGAEA Keyword List</gco:CharacterString> 1995-01-01 creation PANGAEA
info@pangaea.de
https://www.pangaea.de/ information pointOfContact OA-ICC Ocean Acidification International Coordination Centre theme <gco:CharacterString>PANGAEA Project List</gco:CharacterString> 1995-01-01 creation PANGAEA
info@pangaea.de
https://www.pangaea.de/ information pointOfContact copyright copyright CC-BY-4.0: Creative Commons Attribution 4.0 International textTable und geoscientificInformation -72.001643 -72.001643 41.320725 41.320725 2016-06-01T00:00:00 2016-06-30T00:00:00 Type of study thematicClassification Species, unique identification thematicClassification Species, unique identification (URI) thematicClassification Species, unique identification (Semantic URI) thematicClassification Treatment thematicClassification Salinity thematicClassification Alkalinity, total physicalMeasurement µmol/kg µmol/kg Temperature, water physicalMeasurement °C °C pH, NBS scale thematicClassification Carbonate system computation flag thematicClassification Calculated using seacarb after Nisumaa et al. (2010) pH, total scale thematicClassification Calculated using seacarb after Nisumaa et al. (2010) Carbon dioxide physicalMeasurement Calculated using seacarb after Nisumaa et al. (2010) µmol/kg µmol/kg Fugacity of carbon dioxide (water) at sea surface temperature (wet air) physicalMeasurement Calculated using seacarb after Nisumaa et al. (2010) µatm µatm Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) physicalMeasurement Calculated using seacarb after Nisumaa et al. (2010) µatm µatm Bicarbonate ion physicalMeasurement Calculated using seacarb after Nisumaa et al. (2010) µmol/kg µmol/kg Carbonate ion physicalMeasurement Calculated using seacarb after Nisumaa et al. (2010) µmol/kg µmol/kg Carbon, inorganic, dissolved physicalMeasurement Calculated using seacarb after Nisumaa et al. (2010) µmol/kg µmol/kg Aragonite saturation state thematicClassification Calculated using seacarb after Nisumaa et al. (2010) Calcite saturation state thematicClassification Calculated using seacarb after Nisumaa et al. (2010) text/tab-separated-values unknown https://doi.pangaea.de/10.1594/PANGAEA.984692?format=textfile download dataset The data set was checked for completeness, correctness, and consistency of metainformation. Validity of used methods was checked and - if applicable - precision and range of data. EVENT LABEL: Esker_Point_Beach * LATITUDE: 41.320725 * LONGITUDE: -72.001643 * DATE/TIME START: 2016-06-01T00:00:00 * DATE/TIME END: 2016-06-30T00:00:00 2016-06-01T00:00:00 Related to <gco:CharacterString>Complementary genetic and epigenetic changes facilitate rapid adaptation to multiple global change stressors</gco:CharacterString> 2025-01-01 publication https://doi.org/10.1073/pnas.2422782122 Brennan, Reid S
rbrennan@geomar.de
https://orcid.org/0000-0001-7678-564X information author deMayo, James A author Finiguerra, Michael B https://orcid.org/0000-0003-4216-0785 information author Baumann, Hannes
hannes.baumann@stonybrook.edu
https://orcid.org/0000-0002-4039-4230 information author Dam, Hans G
hans.dam@uconn.edu
https://orcid.org/0000-0001-6121-5038 information author Pespeni, Melissa H
mpespeni@uvm.edu
https://orcid.org/0000-0001-5447-6678 information author documentDigital Proceedings of the National Academy of Sciences of the United States of America 122(29) e2422782122 Source <gco:CharacterString>Seawater carbonate chemistry and egg production and hatching success of copepod Acartia tonsa</gco:CharacterString> 2021-01-01 publication https://doi.org/10.1594/PANGAEA.943059 Dam, Hans G
hans.dam@uconn.edu
https://orcid.org/0000-0001-6121-5038 information author deMayo, James A author Park, Gihong https://orcid.org/0000-0002-7775-6063 information author Norton, Lydia author He, Xuejia author Finiguerra, Michael B https://orcid.org/0000-0003-4216-0785 information author Baumann, Hannes
hannes.baumann@stonybrook.edu
https://orcid.org/0000-0002-4039-4230 information author Brennan, Reid S
rbrennan@geomar.de
https://orcid.org/0000-0001-7678-564X information author Pespeni, Melissa H
mpespeni@uvm.edu
https://orcid.org/0000-0001-5447-6678 information author documentDigital References <gco:CharacterString>EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification</gco:CharacterString> 2010-01-01 publication https://doi.org/10.5194/essd-2-167-2010 Nisumaa, Anne-Marin
annemarin@gmail.com
author Pesant, Stephane
pesant@ebi.ac.uk
https://orcid.org/0000-0002-4936-5209 information author Bellerby, Richard G J
Richard.Bellerby@niva.no
http://www2.bjerknes.uib.no/pages.asp?pid=21&kat=5&lang=2 information author Delille, Bruno
bruno.delille@uliege.be
https://orcid.org/0000-0003-0502-8101 information author Middelburg, Jack J
jmiddelburg@nioo.knaw.nl
https://orcid.org/0000-0003-3601-9072 information author Orr, James C
j.orr@iaea.org
https://orcid.org/0000-0002-8707-7080 information author Riebesell, Ulf
uriebesell@geomar.de
https://orcid.org/0000-0002-9442-452X information author Tyrrell, Toby
t.tyrrell@noc.soton.ac.uk
author Wolf-Gladrow, Dieter A
dieter.wolf-gladrow@awi.de
https://orcid.org/0000-0001-9531-8668 information author Gattuso, Jean-Pierre
jean-pierre.gattuso@imev-mer.fr
https://orcid.org/0000-0002-4533-4114 information author documentDigital Earth System Science Data 2(2) 167-175 References <gco:CharacterString>An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal</gco:CharacterString> 2024-01-01 publication https://doi.org/10.5194/essd-16-3771-2024 Yang, Yan
yangyan@xmu.edu.cn
https://orcid.org/0000-0003-4900-5606 information author Brockmann, Patrick author Galdino, Carolina author Schindler, Uwe
uschindler@pangaea.de
https://orcid.org/0000-0002-1900-4162 information author Gazeau, Frédéric
frederic.gazeau@imev-mer.fr
https://orcid.org/0000-0001-8807-4597 information author documentDigital Earth System Science Data 16(8) 3771-3780 References <gco:CharacterString>Data compilation on the biological response to ocean acidification: an update</gco:CharacterString> 2016-01-01 publication https://doi.org/10.5194/essd-8-79-2016 Yang, Yan
yangyan@xmu.edu.cn
https://orcid.org/0000-0003-4900-5606 information author Hansson, L author Gattuso, Jean-Pierre
jean-pierre.gattuso@imev-mer.fr
https://orcid.org/0000-0002-4533-4114 information author documentDigital Earth System Science Data 8(1) 79-87 Related code / software <gco:CharacterString>rsbrennan/tonsa_epigenetics: v2.0.0</gco:CharacterString> 2025-01-01 publication https://doi.org/10.5281/ZENODO.15708666 Brennan, Reid S
rbrennan@geomar.de
https://orcid.org/0000-0001-7678-564X information author documentDigital Zenodo Related code / software <gco:CharacterString>seacarb: seawater carbonate chemistry with R. R package version 3.3.3</gco:CharacterString> 2024-01-01 publication https://cran.r-project.org/web/packages/seacarb/index.html Gattuso, Jean-Pierre
jean-pierre.gattuso@imev-mer.fr
https://orcid.org/0000-0002-4533-4114 information author Epitalon, Jean-Marie author Lavigne, Héloïse
hlavigne@naturalsciences.be
https://orcid.org/0009-0006-6766-0638 information author Orr, James
James.Orr@lsce.ipsl.fr
author Gentili, Bernard
bernard.gentili@orange.fr
http://omtab.obs-vlfr.fr/personnes/z_gent_be/gentili.php information author Hagens, Mathilde https://orcid.org/0000-0003-3980-1043 information author Hofmann, Andreas author Mueller, Jens-Daniel author Proye, Aurélien author Rae, James https://orcid.org/0000-0003-3904-2526 information author Soetaert, Karline
karline.soetaert@nioz.nl
https://orcid.org/0000-0003-4603-7100 information author documentDigital Further details <gco:CharacterString>Acartia tonsa Raw sequence reads: experimental evolution epigenetics</gco:CharacterString> 2019-01-01 publication https://www.ncbi.nlm.nih.gov/bioproject?term=PRJNA590963 documentDigital National Center for Biotechnology Information Further details <gco:CharacterString>Acartia tonsa experimental evolution epigenetics</gco:CharacterString> 2024-01-01 publication https://doi.org/10.5281/ZENODO.13994365 Brennan, Reid S
rbrennan@geomar.de
https://orcid.org/0000-0001-7678-564X information author documentDigital Zenodo