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Frommel, Andrea Y; Akbarzadeh, Arash; Chalifoux, Virginie; Ming, Tobi J; Collicutt, Brenna; Rolheiser, Kate; Opie, Rumer; Miller, Kristina M; Brauner, Colin J; Hunt, Brian P V (2025): Seawater carbonate chemistry and feeding trials on juvenile chum salmon exposed to 2 pCO2 treatments [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.981363

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Published: 2025-04-24 • DOI registered: 2025-05-24

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Abstract:
Andrea Frommel (UBC) performing feeding trials on juvenile chum salmon exposed to 2 PCO2 treatments (Ambient and High with a target for 3000uatm). 18 Mesocosm tanks used. 3 feeding treatments (no food, 1/2 ration, ad lib), 3 replicated per treatment.
This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were provided by the author of the related paper (see Related to) to the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2025-04-24.
Keyword(s):
Animalia; Chordata; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Gene expression (incl. proteomics); Growth/Morphology; Laboratory experiment; Mortality/Survival; Nekton; North Pacific; Oncorhynchus keta; Other; Other studied parameter or process; Pelagos; Single species; Tropical
Supplement to:
Frommel, Andrea Y; Akbarzadeh, Arash; Chalifoux, Virginie; Ming, Tobi J; Collicutt, Brenna; Rolheiser, Kate; Opie, Rumer; Miller, Kristina M; Brauner, Colin J; Hunt, Brian P V (2025): High sensitivity to ocean acidification in wild out-migrating juvenile Pacific salmon is not impacted by feeding success. Ecological Applications, 35(5), e70058, https://doi.org/10.1002/eap.70058
References:
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024
Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Further details:
Raw data of water chemistry, Fitchips_Food and Fitchips_CO2
Project(s):
Ocean Acidification International Coordination Centre (OA-ICC)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Type of studyStudy typeFrommel, Andrea Y
2Species, unique identificationSpecies UIDFrommel, Andrea Y
3Species, unique identification (URI)Species UID (URI)Frommel, Andrea Y
4Species, unique identification (Semantic URI)Species UID (Semantic URI)Frommel, Andrea Y
5Numbern#Frommel, Andrea Yrunning
6DateDateFrommel, Andrea Y
7Time in daysTime ddaysFrommel, Andrea Y
8IdentificationIDFrommel, Andrea YTank
9TreatmentTreatFrommel, Andrea YCO2
10TreatmentTreatFrommel, Andrea YFood
11CommentCommentFrommel, Andrea Ymethod
12IdentificationIDFrommel, Andrea YFish
13MassMassgFrommel, Andrea Y
14LengthlmmFrommel, Andrea Y
15Fulton's condition factorKFrommel, Andrea Y
16HaematocritHt%Frommel, Andrea Y
17CommentCommentFrommel, Andrea Y
18CommentCommentFrommel, Andrea Ysealouse
19Sample IDSample IDFrommel, Andrea Y
20Sodium/Potassium adenosine triphosphatase activity, per protein massNa/K-ATPase act/protµmol/mg/hFrommel, Andrea Y
21Temperature, waterTemp°CFrommel, Andrea YTank
22SalinitySalFrommel, Andrea Y
23Carbon, inorganic, dissolvedDICµmol/kgFrommel, Andrea Y
24Alkalinity, totalATµmol/kgFrommel, Andrea Y
25Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmFrommel, Andrea Y
26pH, total scalepHTFrommel, Andrea Y
27Aragonite saturation stateOmega ArgFrommel, Andrea Y
28Calcite saturation stateOmega CalFrommel, Andrea Y
29Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30pH, total scalepHTYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Change history:
2025-07-30T02:44:19 – Reference, abstract and keywords updated
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
50899 data points

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