Citation:

PANGAEA.981248

Name: Seawater carbonate chemistry and critical thermal minimum/maximum and oxygen consumption rates of fish
Published: 2025-04-24
License: https://creativecommons.org/licenses/by/4.0/
Keywords: Animalia; Chordata; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Harpagifer bispinis; Laboratory experiment; Nekton; Other studied parameter or process; Patagonotothen tessellata; Pelagos; Respiration; Single species; South Atlantic; Temperate; Temperature

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Published: 2025-04-24 • DOI registered: 2025-05-23

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Abstract:

This study seeks to explore the combined effects of warming and acidification on the thermal and metabolic responses of Patagonotothen tessellata and Harpagifer bispinis, two sympatric notothenioid fish from the Beagle Channel. Juveniles were exposed to present-day and near-future summer temperatures (∼10 and 13 °C) and pCO2 levels (∼500 and 1300 μatm) in a full factorial design. Their critical thermal minimum/maximum (CTmin/CTmax) were assessed and their partial thermal tolerance polygons were estimated. Oxygen consumption rates allowed us to calculate fish' aerobic scope (AS) as the difference between the standard and maximum metabolic rates (SMR and MMR).

This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were extracted from tables in the related paper (see Related to) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2025-04-23.

Keyword(s):

Animalia; Chordata; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Harpagifer bispinis; Laboratory experiment; Nekton; Other studied parameter or process; Patagonotothen tessellata; Pelagos; Respiration; Single species; South Atlantic; Temperate; Temperature

Related to:

Gimenez, Eloísa M; Vanella, Fabian A; Wolinski, Laura I; Torres, Rodrigo; Lattuca, María E (2025): Harpagifer bispinis, but not Patagonotothen tessellata, appears robust to interactive effects of ocean warming and acidification in southern Patagonia. Marine Environmental Research, 208, 107123, https://doi.org/10.1016/j.marenvres.2025.107123

References:

Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010

Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024

Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016

Related code / software:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Coverage:

Median Latitude: -54.858300 * Median Longitude: -67.841600 * South-bound Latitude: -54.866600 * West-bound Longitude: -68.416600 * North-bound Latitude: -54.850000 * East-bound Longitude: -67.266600

Event(s):

PNTDF * Latitude: -54.850000 * Longitude: -68.416600 * Method/Device: Experiment (EXP)

Varela_Bay * Latitude: -54.866600 * Longitude: -67.266600 * Method/Device: Experiment (EXP)

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Event label	Event		Lattuca, María E
2	Type of study	Study type		Lattuca, María E
3	Species, unique identification	Species UID		Lattuca, María E
4	Species, unique identification (URI)	Species UID (URI)		Lattuca, María E
5	Species, unique identification (Semantic URI)	Species UID (Semantic URI)		Lattuca, María E
6	Treatment: partial pressure of carbon dioxide	T:pCO2	µatm	Lattuca, María E
7	Treatment: temperature	T:temp	°C	Lattuca, María E
8	Critical thermal minimum	Ct min	°C	Lattuca, María E
9	Critical thermal minimum, standard error	Ct min std e	±	Lattuca, María E
10	Replicates	Repl	#	Lattuca, María E
11	Critical thermal maximum	Ctmax	°C	Lattuca, María E
12	Critical thermal maximum, standard error	Ctmax std e	±	Lattuca, María E
13	Replicates	Repl	#	Lattuca, María E
14	Metabolic rate of oxygen, standard	SMR O2	mg/kg/h	Lattuca, María E
15	Metabolic rate, standard, standard error	SMR std e	±	Lattuca, María E
16	Replicates	Repl	#	Lattuca, María E
17	Metabolic rate of oxygen, maximum	MMR O2	mg/kg/h	Lattuca, María E
18	Metabolic rate, maximum, standard error	MMR std e	±	Lattuca, María E
19	Replicates	Repl	#	Lattuca, María E
20	Aerobic scope of oxygen	Aerobic scope	mg/kg/h	Lattuca, María E
21	Aerobic scope of oxygen, standard error	AS std e	±	Lattuca, María E
22	Replicates	Repl	#	Lattuca, María E
23	Treatment	Treat		Lattuca, María E		pCO2 level
24	Thermal tolerance	T tolerance	°C	Lattuca, María E		total polygonal area
25	Condition index	CI	%	Lattuca, María E		95%, total polygonal area
26	Condition index	CI	%	Lattuca, María E		95%, total polygonal area
27	Thermal tolerance	T tolerance	°C	Lattuca, María E		upper acquired tolerance zone
28	Condition index	CI	%	Lattuca, María E		95%, upper acquired tolerance zone
29	Condition index	CI	%	Lattuca, María E		95%, upper acquired tolerance zone
30	Thermal tolerance	T tolerance	°C	Lattuca, María E		intrinsic tolerance zone
31	Condition index	CI	%	Lattuca, María E		95%, intrinsic tolerance zone
32	Condition index	CI	%	Lattuca, María E		95%, intrinsic tolerance zone
33	Thermal tolerance	T tolerance	°C	Lattuca, María E		lower acquired tolerance zone
34	Condition index	CI	%	Lattuca, María E		95%, lower acquired tolerance zone
35	Condition index	CI	%	Lattuca, María E		95%, lower acquired tolerance zone
36	pH, total scale	pHT		Lattuca, María E	Potentiometric
37	pH, standard error	pH std e	±	Lattuca, María E	Potentiometric
38	Temperature, water	Temp	°C	Lattuca, María E
39	Temperature, water, standard error	T std e	±	Lattuca, María E
40	Salinity	Sal		Lattuca, María E
41	Salinity, standard error	Sal std e	±	Lattuca, María E
42	Alkalinity, total	AT	µmol/kg	Lattuca, María E	Potentiometric titration
43	Alkalinity, total, standard error	AT std e	±	Lattuca, María E	Potentiometric titration
44	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Lattuca, María E	Calculated using CO2SYS
45	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard error	pCO2water_SST_wet std e	±	Lattuca, María E	Calculated using CO2SYS
46	Carbonate ion	[CO3]2-	µmol/kg	Lattuca, María E	Calculated using CO2SYS
47	Carbonate ion, standard error	[CO3]2- std e	±	Lattuca, María E	Calculated using CO2SYS
48	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
49	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
50	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
51	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
52	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
53	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
54	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
55	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
56	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)

License:

Creative Commons Attribution 4.0 International (CC-BY-4.0)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

380 data points

Data

Download dataset as tab-delimited text — use the following character encoding:

1 Event	2 Study type	3 Species UID	4 Species UID (URI)	5 Species UID (Semantic URI)	6 T:pCO2 [µatm]	7 T:temp [°C]	8 Ct min [°C]	9 Ct min std e [±]	10 Repl [#]	11 Ctmax [°C]	12 Ctmax std e [±]	13 Repl [#]	14 SMR O2 [mg/kg/h]	15 SMR std e [±]	16 Repl [#]	17 MMR O2 [mg/kg/h]	18 MMR std e [±]	19 Repl [#]	20 Aerobic scope [mg/kg/h]	21 AS std e [±]	22 Repl [#]	23 Treat (pCO2 level)	24 T tolerance [°C] (total polygonal area)	25 CI [%] (95%, total polygonal area)	26 CI [%] (95%, total polygonal area)	27 T tolerance [°C] (upper acquired tolerance zone)	28 CI [%] (95%, upper acquired tolerance...)	29 CI [%] (95%, upper acquired tolerance...)	30 T tolerance [°C] (intrinsic tolerance zone)	31 CI [%] (95%, intrinsic tolerance zone)	32 CI [%] (95%, intrinsic tolerance zone)	33 T tolerance [°C] (lower acquired tolerance zone)	34 CI [%] (95%, lower acquired tolerance...)	35 CI [%] (95%, lower acquired tolerance...)	36 pHT (Potentiometric)	37 pH std e [±] (Potentiometric)	38 Temp [°C]	39 T std e [±]	40 Sal	41 Sal std e [±]	42 AT [µmol/kg] (Potentiometric titration)	43 AT std e [±] (Potentiometric titration)	44 pCO2water_SST_wet [µatm] (Calculated using CO2SYS)	45 pCO2water_SST_wet std e [±] (Calculated using CO2SYS)	46 [CO3]2- [µmol/kg] (Calculated using CO2SYS)	47 [CO3]2- std e [±] (Calculated using CO2SYS)	48 CSC flag (Calculated using seacarb afte...)	49 CO2 [µmol/kg] (Calculated using seacarb afte...)	50 fCO2water_SST_wet [µatm] (Calculated using seacarb afte...)	51 pCO2water_SST_wet [µatm] (Calculated using seacarb afte...)	52 [HCO3]- [µmol/kg] (Calculated using seacarb afte...)	53 [CO3]2- [µmol/kg] (Calculated using seacarb afte...)	54 DIC [µmol/kg] (Calculated using seacarb afte...)	55 Omega Arg (Calculated using seacarb afte...)	56 Omega Cal (Calculated using seacarb afte...)
Varela_Bay	laboratory	Patagonotothen tessellata	marinespecies.org	urn:lsid:marinespecies.org:taxname:279346	500	10	-1.27	0.03	5	25.39	0.17	6	56	9	9	239	0.035	9	183	34	9														7.98	0.03	11.23	0.36	26.66	0.14	2062	11	441	29	96	5	8	20.00	452.40	454.12	1837.41	91.39	1948.80	1.42	2.28
Varela_Bay	laboratory	Patagonotothen tessellata	marinespecies.org	urn:lsid:marinespecies.org:taxname:279346	1300	10	-1.30	0.01	7	24.23	0.10	8	66	7	10	290	0.056	10	224	58	10														7.54	0.01	9.78	0.04	26.60	0.05	2018	28	1295	43	33	1	8	60.28	1299.30	1304.34	1936.33	32.98	2029.59	0.51	0.82
Varela_Bay	laboratory	Patagonotothen tessellata	marinespecies.org	urn:lsid:marinespecies.org:taxname:279346	500	13	-0.40	0.04	10	26.27	0.04	10	92	13	10	468	0.067	10	371	63	10														7.96	0.02	13.28	0.08	26.65	0.08	2033	21	481	31	96	4	8	19.56	472.47	474.22	1804.90	92.83	1917.29	1.45	2.32
Varela_Bay	laboratory	Patagonotothen tessellata	marinespecies.org	urn:lsid:marinespecies.org:taxname:279346	1300	13	-0.67	0.03	10	25.55	0.12	10	167	23	7	137	0.053	7	149	49	7														7.55	0.02	13.31	0.07	26.60	0.06	1956	34	1250	61	39	1	8	51.91	1254.65	1259.30	1863.62	37.28	1952.82	0.58	0.93
PNTDF	laboratory	Harpagifer bispinis	marinespecies.org	urn:lsid:marinespecies.org:taxname:234626	500	10	-1.60	0.06	10	25.30	0.09	10	51	5	10	116	0.007	10	65	6	10														7.98	0.03	11.23	0.36	26.66	0.14	2062	11	441	29	96	5	8	20.00	452.40	454.12	1837.41	91.39	1948.80	1.42	2.28
PNTDF	laboratory	Harpagifer bispinis	marinespecies.org	urn:lsid:marinespecies.org:taxname:234626	1300	10	-1.57	0.02	10	25.33	0.09	10	55	7	9	123	0.010	9	68	13	9														7.54	0.01	9.78	0.04	26.60	0.05	2018	28	1295	43	33	1	8	60.28	1299.30	1304.34	1936.33	32.98	2029.59	0.51	0.82
PNTDF	laboratory	Harpagifer bispinis	marinespecies.org	urn:lsid:marinespecies.org:taxname:234626	500	13	-0.65	0.08	6	26.36	0.10	10	59	5	10	112	0.035	10	44	12	10														7.96	0.02	13.28	0.08	26.65	0.08	2033	21	481	31	96	4	8	19.56	472.47	474.22	1804.90	92.83	1917.29	1.45	2.32
PNTDF	laboratory	Harpagifer bispinis	marinespecies.org	urn:lsid:marinespecies.org:taxname:234626	1300	13	-1.48	0.11	8	26.20	0.12	8	62	7	10	129	0.008	10	67	5	10														7.55	0.02	13.31	0.07	26.60	0.06	1956	34	1250	61	39	1	8	51.91	1254.65	1259.30	1863.62	37.28	1952.82	0.58	0.93
Varela_Bay	laboratory	Patagonotothen tessellata	marinespecies.org	urn:lsid:marinespecies.org:taxname:279346																		Present-day	106.67	105.64	107.74	1.75	2.26	1.24	103.18	101.60	104.80	1.74	1.78	1.70
Varela_Bay	laboratory	Patagonotothen tessellata	marinespecies.org	urn:lsid:marinespecies.org:taxname:279346																		Near-future	103.49	102.44	104.52	2.64	2.54	2.74	99.58	98.60	100.56	1.26	1.30	1.22
PNTDF	laboratory	Harpagifer bispinis	marinespecies.org	urn:lsid:marinespecies.org:taxname:234626																		Present-day	107.82	106.54	108.88	2.13	2.12	1.92	103.78	102.44	105.12	1.91	1.98	1.84
PNTDF	laboratory	Harpagifer bispinis	marinespecies.org	urn:lsid:marinespecies.org:taxname:234626																		Near-future	109.15	107.84	110.84	1.76	1.66	1.86	107.22	105.64	108.80	0.18	0.54	0.18