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Geng, Rongwei; Weinelt, Mara (2025): Pollen-based climate reconstructions and syntheses in Europe [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.980704 (DOI registration in progress)

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Published: 2025-04-07

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Abstract:
A fossil pollen dataset distributed across Europe (10° W - 43° E, 33° - 71° N) comprising 520 records was extracted from the LegacyPollen 1.0 database (Herzschuh et al., 2022) to reconstruct climatic variables including Annual temperature (TANN), Annual precipitation (PANN), Winter Temperature (December, January, February; TDJF), Summer Temperature (June, July, August; TJJA). Short records not reaching beyond 1 ka BP were also excluded to keep the dataset refined, as the syntheses aim to cover the entire Holocene (i.e., 11-1 ka BP). The modern pollen training dataset was integrated from Legacy Climate 1.0 (Herzschuh et al., 2023) and the EMPD2 (Davis et al., 2020). Two different approaches were applied in parallel to reconstruct climate variables from fossil pollen assemblages, namely Modern Analogue Technique (MAT) and Weighted Averaging Partial Least Squares (WAPLS). Reconstruction uncertainties were provided as Root Mean Squared Errors of Prediction (RMSEPs). All the reconstructions and tests were conducted using the rioja and analogue packages in R (R Core Team, 2019). The synthesized results were interpolated from all reconstructed climate records. The mean value of reconstructed climatic variables with the same ages was calculated before any interpolations. Due to the different chronological resolution of the time series, the sequences were then interpolated to equidistant time series of 50-year intervals. Two different interpolation methods were applied in R. The first is to use the interp.dataset function from rioja package with loess regression to interpolate the dataset as a whole. The second is to interpolate each complete record that can cover the Holocene (i.e., 11-1 ka) and has a mean resolution of less than 1ka separately using the corit package with linear regression and then calculate the mean of these records. To perform the latter interpolation, a total of 214 records covering the entire period between 11-1 ka BP were used. The Root Mean Squared Errors (RMSEs) were calculated for the synthesis results.
Keyword(s):
Europe; Holocene; paleoclimatology; Pollen; Quantitative reconstruction
Related to:
Geng, Rongwei; Weinelt, Mara; Zhang, Wenchao (2025): Syntheses of pollen-based temperature reconstructions with respect to seasonal and spatiotemporal change in Europe. Quaternary Science Reviews, 353, 109228, https://doi.org/10.1016/j.quascirev.2025.109228
Source:
Chevalier, Manuel; Davis, Basil A S; Sommer, Philipp S; Zanon, Marco; Carter, Vachel A; Phelps, Leanne N; Mauri, Achille; Finsinger, Walter (2019): Eurasian Modern Pollen Database (former European Modern Pollen Database) [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.909130
Davis, Basil A S; et al. (2020): The Eurasian Modern Pollen Database (EMPD), version 2. Earth System Science Data, 12(4), 2423-2445, https://doi.org/10.5194/essd-12-2423-2020
Herzschuh, Ulrike; Böhmer, Thomas; Li, Chenzhi; Cao, Xianyong (2023): Northern Hemisphere temperature and precipitation reconstruction from taxonomically harmonized pollen data set with revised chronologies using WA-PLS and MAT (LegacyClimate 1.0) [dataset publication series]. PANGAEA, https://doi.org/10.1594/PANGAEA.930512
Herzschuh, Ulrike; Böhmer, Thomas; Li, Chenzhi; Cao, Xianyong; Heim, Birgit; Wieczorek, Mareike (2021): Global taxonomically harmonized pollen data set for Late Quaternary with revised chronologies (LegacyPollen 1.0) [dataset publication series]. PANGAEA, https://doi.org/10.1594/PANGAEA.929773
Herzschuh, Ulrike; Böhmer, Thomas; Li, Chenzhi; Chevalier, Manuel; Hébert, Raphaël; Dallmeyer, Anne; Cao, Xianyong; Bigelow, Nancy H; Nazarova, Larisa B; Novenko, Elena Y; Park, Jungjae; Peyron, Odile; Rudaya, Natalia; Schlütz, Frank; Shumilovskikh, Lyudmila S; Tarasov, Pavel E; Wang, Yongbo; Wen, Ruilin; Xu, Qinghai; Zheng, Zhuo (2023): LegacyClimate 1.0: a dataset of pollen-based climate reconstructions from 2594 Northern Hemisphere sites covering the last 30 kyr and beyond. Earth System Science Data, 15(6), 2235-2258, https://doi.org/10.5194/essd-15-2235-2023
Herzschuh, Ulrike; Li, Chenzhi; Böhmer, Thomas; Postl, Alexander; Heim, Birgit; Andreev, Andrei A; Cao, Xianyong; Wieczorek, Mareike; Ni, Jian (2022): LegacyPollen 1.0: a taxonomically harmonized global late Quaternary pollen dataset of 2831 records with standardized chronologies. Earth System Science Data, 14(7), 3213-3227, https://doi.org/10.5194/essd-14-3213-2022
Related code / software:
Juggins, Stephen (2024): rioja: Analysis of Quaternary Science Data." R package version 1.0-7 [software]. https://cran.r-project.org/package=rioja
Reschke, Maria; Kunz, Torben; Laepple, Thomas (2019): Comparing methods for analysing time scale dependent correlations in irregularly sampled time series data. Computers & Geosciences, 123, 65-72, https://doi.org/10.1016/j.cageo.2018.11.009 (corit package)
Simpson, Gavin; Oksanen, Jari (2024): analogue: Analogue and weighted averaging methods for palaeoecology. R package version 0.17-7 [software]. https://cran.r-project.org/package=analogue
Coverage:
Median Latitude: 52.000000 * Median Longitude: 16.500000 * South-bound Latitude: 33.000000 * West-bound Longitude: -10.000000 * North-bound Latitude: 71.000000 * East-bound Longitude: 43.000000
Event(s):
LegacyPollen_1.0_Europe * Latitude Start: 33.000000 * Longitude Start: -10.000000 * Latitude End: 71.000000 * Longitude End: 43.000000 * Method/Device: Compilation
Comment:
TANN - annual temperature; PANN - Annual precipitation; TDJF - Winter Temperature (December, January, February); TJJA - Summer Temperature (June, July, August)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1File contentContentGeng, Rongwei
2Office Open XML WorkbookXLSXGeng, Rongwei
3Office Open XML Workbook (File Size)XLSX (Size)BytesGeng, Rongwei
Status:
Curation Level: Basic curation (CurationLevelB)
Size:
4 data points

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