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Jesulich, Andrea Carlina; Lauer, Mariana Machado; de Barros Marangoni, Laura Fernandes; Marques, Joseane Aparecida; Zebral, Yuri Dornelles; Pereira, Cristiano Macedo; Duarte, Gustavo Adolpho Santos; Pires, Debora de Oliveira; Castro, Clovis Barreira e; Calderon, Emiliano Nicolas; Bianchini, A (2025): Seawater carbonate chemistry and energy metabolism in the hydrocoral Millepora alcicornis [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.977812

Always quote citation above when using data! You can download the citation in several formats below.

Published: 2025-03-04DOI registered: 2025-04-02

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Abstract:
A mesocosm experiment was conducted to investigate whether three levels of decreasing seawater pH could alter the activity of key enzymes involved in the energy metabolism in Millepora alcicornis. Hydrocorals were acclimated to marine mesocosm conditions for 20 days and then exposed to different seawater pH levels [ambient pH (8.1) and experimental pH (7.8, 7.5 and 7.2)] for 16 and 30 days. Endpoints analyzed included the activity of key enzymes involved in the regulation of the glycolytic pathway (hexokinase and pyruvate kinase), aerobic energy production via the Krebs cycle (citrate synthase) and anaerobic energy production via lactate formation (lactate dehydrogenase).
This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were extracted from tables in the related paper (see Related to) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2025-02-27.
Keyword(s):
Animalia; Benthic animals; Benthos; Cnidaria; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Laboratory experiment; Millepora alcicornis; Other metabolic rates; Single species; South Atlantic; Tropical
Related to:
Jesulich, Andrea Carlina; Lauer, Mariana Machado; de Barros Marangoni, Laura Fernandes; Marques, Joseane Aparecida; Zebral, Yuri Dornelles; Pereira, Cristiano Macedo; Duarte, Gustavo Adolpho Santos; Pires, Debora de Oliveira; Castro, Clovis Barreira e; Calderon, Emiliano Nicolas; Bianchini, A (2025): Effect of seawater acidification on energy metabolism in the hydrocoral Millepora alcicornis : inhibition of citrate synthase activity indicates disruption in aerobic pathways. Environmental Science: Advances, 4(3), 447-455, https://doi.org/10.1039/D4VA00083H
References:
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024
Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Coverage:
Latitude: -16.410300 * Longitude: -38.983900
Event(s):
Porto_Seguro * Latitude: -16.410300 * Longitude: -38.983900
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
Type of studyStudy typeBianchini, A
Species, unique identificationSpecies UIDBianchini, A
Species, unique identification (URI)Species UID (URI)Bianchini, A
Species, unique identification (Semantic URI)Species UID (Semantic URI)Bianchini, A
Time in daysTime ddaysBianchini, A
Treatment: pHT:pHBianchini, A
ReplicateReplBianchini, A
Hexokinase activity, per protein massHK act/protU/mgBianchini, A
Hexokinase activity, standard deviationHK act std dev±Bianchini, A
10 Pyruvate kinase activity, per protein massPK actU/gBianchini, A
11 Pyruvate kinase activity, standard deviationPK act std dev±Bianchini, A
12 Lactate dehydrogenase activity, unit per protein massLDH/protU/mgBianchini, A
13 Lactate dehydrogenase activity, standard deviationLDH std dev±Bianchini, A
14 Citrate synthase activity, unit per protein massCS/protU/mgBianchini, A
15 Citrate synthase activity, standard deviationCS std dev±Bianchini, A
16 pH, free scalepHFBianchini, A
17 pH, standard deviationpH std dev±Bianchini, A
18 Temperature, waterTemp°CBianchini, A
19 Temperature, water, standard deviationTemp std dev±Bianchini, A
20 SalinitySalBianchini, A
21 Salinity, standard deviationSal std dev±Bianchini, A
22 Alkalinity, totalATmg/lBianchini, A
23 Alkalinity, total, standard deviationAT std dev±Bianchini, A
24 Carbon, organic, dissolvedDOCmg/lBianchini, A
25 Carbon, organic, dissolved, standard deviationDOC std dev±Bianchini, A
26 IrradianceEµmol photons/m2/sBianchini, A
27 Irradiance, standard deviationE std dev±Bianchini, A
28 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29 pH, total scalepHTYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36 Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
38 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1296 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Study type

Species UID

Species UID (URI)

Species UID (Semantic URI)

Time d [days]

T:pH

Repl

HK act/prot [U/mg]

HK act std dev [±]
10 
PK act [U/g]
11 
PK act std dev [±]
12 
LDH/prot [U/mg]
13 
LDH std dev [±]
14 
CS/prot [U/mg]
15 
CS std dev [±]
16 
pHF
17 
pH std dev [±]
18 
Temp [°C]
19 
Temp std dev [±]
20 
Sal
21 
Sal std dev [±]
22 
AT [mg/l]
23 
AT std dev [±]
24 
DOC [mg/l]
25 
DOC std dev [±]
26 
E [µmol photons/m2/s]
27 
E std dev [±]
28 
CSC flag
29 
pHT
30 
CO2 [µmol/kg]
31 
fCO2water_SST_wet [µatm]
32 
pCO2water_SST_wet [µatm]
33 
[HCO3]- [µmol/kg]
34 
[CO3]2- [µmol/kg]
35 
DIC [µmol/kg]
36 
AT [µmol/kg]
37 
Omega Arg
38 
Omega Cal
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:21072608.110.02130.0038401210.1580.0300.06680.00778.100.09625.190.0335.110.39119.21.73.430.37285.041.3267.9913.15465.72467.211844.66197.782055.602329.573.144.76
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:21072608.120.02090.0056384220.1650.0360.06400.00948.100.09625.190.0335.110.39119.21.73.430.37285.041.3267.9913.15465.72467.211844.66197.782055.602329.573.144.76
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:21072608.130.02290.0041402150.1660.0320.06300.01038.100.09625.190.0335.110.39119.21.73.430.37285.041.3267.9913.15465.72467.211844.66197.782055.602329.573.144.76
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:21072608.140.02080.0041383160.1340.0310.07450.00898.100.09625.190.0335.110.39119.21.73.430.37285.041.3267.9913.15465.72467.211844.66197.782055.602329.573.144.76
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726168.110.01990.0022339420.1620.0270.05510.00248.100.09625.190.0335.110.39119.21.73.430.37285.041.3267.9913.15465.72467.211844.66197.782055.602329.573.144.76
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726168.120.01880.0026352420.1600.0170.05310.00358.100.09625.190.0335.110.39119.21.73.430.37285.041.3267.9913.15465.72467.211844.66197.782055.602329.573.144.76
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726168.130.01650.0018333360.1740.0300.05440.00428.100.09625.190.0335.110.39119.21.73.430.37285.041.3267.9913.15465.72467.211844.66197.782055.602329.573.144.76
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726168.140.01650.0020345380.1570.0260.05180.00378.100.09625.190.0335.110.39119.21.73.430.37285.041.3267.9913.15465.72467.211844.66197.782055.602329.573.144.76
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726167.810.02280.0018303220.1720.0120.05150.00287.740.18525.000.0335.020.41117.11.53.560.36296.441.5267.6333.651185.221189.022054.3995.442183.482288.551.512.30
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726167.820.02340.0015307200.1800.0050.05380.00457.740.18525.000.0335.020.41117.11.53.560.36296.441.5267.6333.651185.221189.022054.3995.442183.482288.551.512.30
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726167.830.02220.0016281230.1820.0080.05560.00487.740.18525.000.0335.020.41117.11.53.560.36296.441.5267.6333.651185.221189.022054.3995.442183.482288.551.512.30
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726167.840.02190.0021285220.1770.0100.05400.00337.740.18525.000.0335.020.41117.11.53.560.36296.441.5267.6333.651185.221189.022054.3995.442183.482288.551.512.30
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726167.510.01890.0012292340.2020.0250.05530.01007.510.16025.160.0335.130.37115.82.63.200.31285.533.9267.4058.822081.562088.222119.6658.382236.852263.070.931.40
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726167.520.01850.0013269380.1890.0150.05650.01147.510.16025.160.0335.130.37115.82.63.200.31285.533.9267.4058.822081.562088.222119.6658.382236.852263.070.931.40
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726167.530.01910.0011299240.2020.0190.05220.01107.510.16025.160.0335.130.37115.82.63.200.31285.533.9267.4058.822081.562088.222119.6658.382236.852263.070.931.40
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726167.540.01770.0009267300.1810.0240.05490.01237.510.16025.160.0335.130.37115.82.63.200.31285.533.9267.4058.822081.562088.222119.6658.382236.852263.070.931.40
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726167.210.01380.0009260420.1720.0410.06330.00357.200.19025.130.0435.070.34115.91.53.190.34277.039.8267.09124.354395.794409.912192.7429.512346.602265.100.470.71
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726167.220.01330.0010267480.1890.0300.06630.00167.200.19025.130.0435.070.34115.91.53.190.34277.039.8267.09124.354395.794409.912192.7429.512346.602265.100.470.71
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726167.230.01550.0008279390.1520.0360.06300.00097.200.19025.130.0435.070.34115.91.53.190.34277.039.8267.09124.354395.794409.912192.7429.512346.602265.100.470.71
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726167.240.01420.0008253350.1700.0340.06510.00227.200.19025.130.0435.070.34115.91.53.190.34277.039.8267.09124.354395.794409.912192.7429.512346.602265.100.470.71
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726308.110.01400.0015283380.1560.0340.06910.00888.100.09625.190.0335.110.39119.21.73.430.37285.041.3267.9913.15465.72467.211844.66197.782055.602329.573.144.76
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726308.120.01610.0014316200.1490.0360.06960.00938.100.09625.190.0335.110.39119.21.73.430.37285.041.3267.9913.15465.72467.211844.66197.782055.602329.573.144.76
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726308.130.01560.0017321310.1390.0210.06990.00798.100.09625.190.0335.110.39119.21.73.430.37285.041.3267.9913.15465.72467.211844.66197.782055.602329.573.144.76
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726308.140.01360.0019290410.1360.0250.06260.00948.100.09625.190.0335.110.39119.21.73.430.37285.041.3267.9913.15465.72467.211844.66197.782055.602329.573.144.76
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726307.810.01050.0017264270.1490.0100.02840.00617.740.18525.000.0335.020.41117.11.53.560.36296.441.5267.6333.651185.221189.022054.3995.442183.482288.551.512.30
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726307.820.01210.0016242300.1390.0070.02390.00427.740.18525.000.0335.020.41117.11.53.560.36296.441.5267.6333.651185.221189.022054.3995.442183.482288.551.512.30
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726307.830.01040.0019255170.1580.0090.02740.00697.740.18525.000.0335.020.41117.11.53.560.36296.441.5267.6333.651185.221189.022054.3995.442183.482288.551.512.30
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726307.840.01200.0021247200.1450.0060.02490.00617.740.18525.000.0335.020.41117.11.53.560.36296.441.5267.6333.651185.221189.022054.3995.442183.482288.551.512.30
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726307.510.01250.0021284520.1270.0430.03280.01367.510.16025.160.0335.130.37115.82.63.200.31285.533.9267.4058.822081.562088.222119.6658.382236.852263.070.931.40
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726307.520.01120.0018310460.1390.0530.03460.01217.510.16025.160.0335.130.37115.82.63.200.31285.533.9267.4058.822081.562088.222119.6658.382236.852263.070.931.40
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726307.530.01160.0021279570.1130.0560.03490.01257.510.16025.160.0335.130.37115.82.63.200.31285.533.9267.4058.822081.562088.222119.6658.382236.852263.070.931.40
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726307.540.01110.0020280580.1310.0510.03680.01277.510.16025.160.0335.130.37115.82.63.200.31285.533.9267.4058.822081.562088.222119.6658.382236.852263.070.931.40
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726307.210.01130.0018333100.1440.0080.03860.00247.200.19025.130.0435.070.34115.91.53.190.34277.039.8267.09124.354395.794409.912192.7429.512346.602265.100.470.71
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726307.220.01190.0016355120.1300.0090.03950.00317.200.19025.130.0435.070.34115.91.53.190.34277.039.8267.09124.354395.794409.912192.7429.512346.602265.100.470.71
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726307.230.01300.0019340130.1440.0140.04370.00607.200.19025.130.0435.070.34115.91.53.190.34277.039.8267.09124.354395.794409.912192.7429.512346.602265.100.470.71
laboratoryMillepora alcicornismarinespecies.orgurn:lsid:marinespecies.org:taxname:210726307.240.01170.0019309110.1400.0120.04450.00397.200.19025.130.0435.070.34115.91.53.190.34277.039.8267.09124.354395.794409.912192.7429.512346.602265.100.470.71