Citation:

PANGAEA.975927 (DOI registration in progress)

Name: Seawater carbonate chemistry and sperm and adult biomarkers in the mussel Mytilus galloprovincialis in a multi-stressor context
Published: 2025-02-18
License: https://creativecommons.org/licenses/by/4.0/
Keywords: Animalia; Behaviour; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Laboratory experiment; Mediterranean Sea; Mollusca; Mytilus galloprovincialis; North Atlantic; Organic toxins; Other metabolic rates; Other studied parameter or process; Reproduction; Single species; Temperate

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Published: 2025-02-18

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Abstract:

This study investigated the combined impacts of UV-filters 4-methylbenzylidene camphor (4-MBC) and benzophenone-3 (BP-3), at ecologically relevant concentrations (1 and 10 µg/L), under two target pH levels (8.2 and 7.7, reflecting a ∆pH of 0 and -0.3 relative to the average pH at the sampling site), on the biochemical performance and male reproductive health of the mussel Mytilus galloprovincialis.

This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were provided by the author of the related paper (see Related to) to the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2025-02-17.

Keyword(s):

Animalia; Behaviour; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Laboratory experiment; Mediterranean Sea; Mollusca; Mytilus galloprovincialis; North Atlantic; Organic toxins; Other metabolic rates; Other studied parameter or process; Reproduction; Single species; Temperate

Related to:

Cuccaro, Alessia; Moreira, Anthony; De Marchi, Lucia; Meucci, Valentina; Soares, Amadeu M V M; Pretti, Carlo; Freitas, Rosa (2025): Impacts of UV-filter pollution and low pH: Sperm and adult biomarkers in the mussel Mytilus galloprovincialis in a multi-stressor context. Journal of Hazardous Materials, 481, 136405, https://doi.org/10.1016/j.jhazmat.2024.136405

References:

Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010

Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024

Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016

Related code / software:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Type of study	Study type		Cuccaro, Alessia
2	Species, unique identification	Species UID		Cuccaro, Alessia
3	Species, unique identification (URI)	Species UID (URI)		Cuccaro, Alessia
4	Species, unique identification (Semantic URI)	Species UID (Semantic URI)		Cuccaro, Alessia
5	Experiment	Exp		Cuccaro, Alessia
6	4-Methylbenzylidene camphor	4-MBC	µg/L	Cuccaro, Alessia
7	Benzophenone-3	BP-3	µg/L	Cuccaro, Alessia
8	Treatment: pH	T:pH		Cuccaro, Alessia
9	Lipid peroxidation	LPO		Cuccaro, Alessia
10	Lipid peroxidation, standard deviation	LPO std dev	±	Cuccaro, Alessia
11	Reactive oxygen species production	ROS prod		Cuccaro, Alessia		Intracellular, superoxide anions
12	Reactive oxygen species production, standard deviation	ROS prod std dev	±	Cuccaro, Alessia		Intracellular, superoxide anions
13	Reactive oxygen species production	ROS prod		Cuccaro, Alessia		Intracellular, hydrogen peroxide
14	Reactive oxygen species production, standard deviation	ROS prod std dev	±	Cuccaro, Alessia		Intracellular, hydrogen peroxide
15	Viability	Viab	%	Cuccaro, Alessia		MTT assay
16	Viability, standard deviation	Viab std dev	±	Cuccaro, Alessia		MTT assay
17	DNA integrity	DNA integrity	%	Cuccaro, Alessia
18	DNA integrity, standard deviation	DNA integrity std dev	±	Cuccaro, Alessia
19	Condition index	CI	%	Cuccaro, Alessia
20	Condition index, standard deviation	CI std dev	±	Cuccaro, Alessia
21	Filtration rate per individual	FR/ind	ml/#/min	Cuccaro, Alessia
22	Filtration rate, standard deviation	FR std dev	±	Cuccaro, Alessia
23	Electron transport system activity of oyxgen	ETS	µmol/g/min	Cuccaro, Alessia
24	Electron transport system activity of oyxgen, standard deviation	ETS std dev	±	Cuccaro, Alessia
25	Carbohydrates	CHO	µg/ml	Cuccaro, Alessia
26	Carbohydrates, standard deviation	CARB std dev	±	Cuccaro, Alessia
27	Total antioxidant capacity	TAC	µmol/L	Cuccaro, Alessia
28	Total antioxidant capacity, standard deviation	TAC std dev		Cuccaro, Alessia
29	Superoxide dismutase activity	SOD	U/ml	Cuccaro, Alessia
30	Superoxide dismutase activity, standard deviation	SOD std dev	±	Cuccaro, Alessia
31	Carboxyl-esterases activity, per protein	CEs/prot	nmol/min/mg	Cuccaro, Alessia
32	Carboxyl-esterases activity, standard deviation	CEs std dev	±	Cuccaro, Alessia
33	Glutathione-S-transferases activity, per protein	GSTs/prot	nmol/min/mg	Cuccaro, Alessia
34	Glutathione-S-transferases activity, standard deviation	GSTs std dev	±	Cuccaro, Alessia
35	Acid phosphatase activity, per protein	ACP/prot	nmol/min/mg	Cuccaro, Alessia
36	Acid phosphatase activity, standard deviation	ACP std dev	±	Cuccaro, Alessia
37	Alkaline phosphatase activity, per protein	ALP/prot	mmol/mg/min	Cuccaro, Alessia
38	Alkaline phosphatase activity, standard deviation	ALKP A std dev	±	Cuccaro, Alessia
39	Replicates	Repl	#	Cuccaro, Alessia
40	Temperature, water	Temp	°C	Cuccaro, Alessia
41	Temperature, water, standard deviation	Temp std dev	±	Cuccaro, Alessia
42	Salinity	Sal		Cuccaro, Alessia
43	Salinity, standard deviation	Sal std dev	±	Cuccaro, Alessia
44	pH, NBS scale	pH NBS		Cuccaro, Alessia	Potentiometric
45	pH, standard deviation	pH std dev	±	Cuccaro, Alessia	Potentiometric	NBS scale
46	pH, total scale	pHT		Cuccaro, Alessia
47	pH, standard deviation	pH std dev	±	Cuccaro, Alessia		total scale
48	Alkalinity, total	AT	µmol/kg	Cuccaro, Alessia	Potentiometric titration
49	Alkalinity, total, standard deviation	AT std dev	±	Cuccaro, Alessia	Potentiometric titration
50	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Cuccaro, Alessia	Calculated using CO2SYS
51	Partial pressure of carbon dioxide, standard deviation	pCO2 std dev	±	Cuccaro, Alessia	Calculated using CO2SYS
52	Bicarbonate ion	[HCO3]-	µmol/kg	Cuccaro, Alessia	Calculated using CO2SYS
53	Bicarbonate ion, standard deviation	[HCO3]- std dev	±	Cuccaro, Alessia	Calculated using CO2SYS
54	Carbonate ion	[CO3]2-	µmol/kg	Cuccaro, Alessia	Calculated using CO2SYS
55	Carbonate ion, standard deviation	[CO3]2- std dev	±	Cuccaro, Alessia	Calculated using CO2SYS
56	Calcite saturation state	Omega Cal		Cuccaro, Alessia	Calculated using CO2SYS
57	Calcite saturation state, standard deviation	Omega Cal std dev	±	Cuccaro, Alessia	Calculated using CO2SYS
58	Aragonite saturation state	Omega Arg		Cuccaro, Alessia	Calculated using CO2SYS
59	Aragonite saturation state, standard deviation	Omega Arg std dev	±	Cuccaro, Alessia	Calculated using CO2SYS
60	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
61	pH, total scale	pHT		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
62	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
63	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
64	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
65	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
66	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
67	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
68	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
69	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)

License:

Creative Commons Attribution 4.0 International (CC-BY-4.0)

Size:

1248 data points

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