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Chouvelon, Tiphaine; Olivar, M Pilar; Pampoulie, Christophe; Ólafsdóttir, Anna H; Churlaud, Carine; Brault-Favrou, Maud; Spitz, Jérôme: Elemental composition of deep pelagic fish and crustaceans sampled between 2002 and 2020 in temperate and subarctic Atlantic, and in western Mediterranean [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.975393 (dataset in review)

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Abstract:
The dataset contains 108 records of major and trace element concentrations measured on (eviscerated) whole bodies of meso- to bathypelagic fish (19 species), decapods (4 species) and euphausiids (1 species) collected around the Iberian Peninsula (temperate Atlantic and western Mediterranean), in the Bay of Biscay (temperate Atlantic), and in waters south of Iceland and in southern Irminger Sea (subarctic Atlantic). Samples around the Iberian Peninsula were collected on the CSIC-SUMMER cruise in October 2020 on R/V Sarmiento de Gamboa (Olivar et al. 2022). Samples from the Bay of Biscay were collected in autumn from 2002 to 2019, during the EVHOE fishery survey ("Evaluation Halieutique de l'Ouest de l'Europe"; https://doi.org/10.18142/8) conducted each year by the "Institut Français de Recherche pour l'Exploitation de la Mer" (Ifremer) on R/V Thalassa. Finally, samples from the subarctic Atlantic were collected in July 2020 during the IESSNS survey, icelandic part, on R/V (Ólafsdóttir and Pampoulie, 2021). For elemental analyses, aliquots of samples (~200 mg dry weight of homogenised specimens) were digested using a mixture of nitric and hydrochloric acids. Acidic digestion of the samples was performed overnight at room temperature and then in a microwave oven. Total concentrations of the micro-mineral phosphorus (P) and of the trace elements arsenic (As), cadmium (Cd), cobalt (Co), copper (Cu), iron (Fe), manganese (Mn), nickel (Ni), lead (Pb), selenium (Se) and zinc (Zn) were determined by inductively coupled plasma atomic emission spectrometry (ICP-OES) and/or mass spectrometry (ICP-MS). Total mercury (Hg) concentrations were also determined on aliquots of homogenised powder (50 ± 5 mg), by atomic absorption spectrophotometry using an Advanced Mercury Analyser. The quality assurance of these elemental analyses relied on blank and internal standard controls, and on the accuracy and reproducibility of data relative to the certified reference materials (CRMs) used in each analytical run. All elemental concentrations are given on a dry weight basis and can be converted on a wet weight basis according to the average percentages of moisture provided for each sample.
Keyword(s):
bathypelagic; crustacea; field observation; fish; inorganic elements; Marine ecosystems; mesopelagic; micro-minerals; Micro-nutrients; trace metals
References:
Laffargue, P; Garren, François; Poulard, Jean-Charles; Bellail, Robert; Salaun, Michèle; Mahe, Jean-Claude (1987): EVHOE Evaluation Halieutique Ouest de l'Europe. Sismer, https://doi.org/10.18142/8
Ólafsdóttir, Anna H; Pampoulie, Christophe (2021): Fish and invertebrate trawl sampling south of Iceland and in southern Irminger Sea in July 2020 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.930437
Olivar, M Pilar; Castellón, Arturo; Sabatés, Ana; Sarmiento Lezcano, Airam Nauzet; Bernal, Ainhoa (2022): Abundance of mesopelagic fish collected at different layers of the water column around the Iberian Peninsula [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.947631
Funding:
Horizon 2020 (H2020), grant/award no. 817806: Sustainable management of mesopelagic resources
Coverage:
Median Latitude: 46.987638 * Median Longitude: -7.086031 * South-bound Latitude: 35.888883 * West-bound Longitude: -40.826333 * North-bound Latitude: 63.215500 * East-bound Longitude: -2.088800
Date/Time Start: 2002-10-17T17:42:00 * Date/Time End: 2020-10-16T03:38:00
Minimum DEPTH, water: m * Maximum DEPTH, water: 2000 m
Event(s):
29SG20200929_2-PEL10 (PEL10) * Latitude Start: 35.980800 * Longitude Start: -3.930500 * Latitude End: 35.989000 * Longitude End: -3.942500 * Date/Time Start: 2020-10-09T01:26:00 * Date/Time End: 2020-10-09T01:58:00 * Elevation Start: -1317.0 m * Elevation End: -1311.0 m * Mesh size: 4 mm * Location: Alboran Sea, Mediterranean Sea * Campaign: 29SG20200929 (SUMMER) * Basis: Sarmiento de Gamboa * Method/Device: Midwater trawl, Mesopelagos (Meillat, 2012) (Mesopelagos)
29SG20200929_2-PEL11 (PEL11) * Latitude Start: 35.866700 * Longitude Start: -3.862500 * Latitude End: 35.888900 * Longitude End: -3.886700 * Date/Time Start: 2020-10-09T13:16:00 * Date/Time End: 2020-10-09T14:49:00 * Mesh size: 4 mm * Location: Alboran Sea, Mediterranean Sea * Campaign: 29SG20200929 (SUMMER) * Basis: Sarmiento de Gamboa * Method/Device: Midwater trawl, Mesopelagos (Meillat, 2012) (Mesopelagos)
29SG20200929_Neuston_3 * Latitude: 35.964100 * Longitude: -3.828900 * Date/Time: 2020-10-11T02:02:00 * Location: Alboran Sea * Campaign: 29SG20200929 (SUMMER) * Basis: Sarmiento de Gamboa * Method/Device: Neuston net (NEU)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventChouvelon, Tiphaine
2Record numberRNChouvelon, Tiphaine
3Ocean and sea regionOS regionChouvelon, Tiphaine
4LocationLocationChouvelon, Tiphaine
5DATE/TIMEDate/TimeChouvelon, TiphaineGeocode
6LATITUDELatitudeChouvelon, TiphaineGeocode
7LONGITUDELongitudeChouvelon, TiphaineGeocode
8MonthMonthChouvelon, Tiphainestart
9MonthMonthChouvelon, Tiphaineend
10Year of observationYear obsa ADChouvelon, Tiphainestart
11Year of observationYear obsa ADChouvelon, Tiphaineend
12GearGearChouvelon, Tiphaine
13Depth, water, top/minimumDepth water topmChouvelon, Tiphaine
14Depth, water, bottom/maximumDepth water botmChouvelon, Tiphaine
15DEPTH, waterDepth watermChouvelon, TiphaineCalculated average/mean valuesGeocode
16OrganismsOrgChouvelon, Tiphainetype
17PhylumPhylumChouvelon, TiphaineVisual identification (VID)
18ClassClassChouvelon, TiphaineVisual identification (VID)
19OrderOrderChouvelon, TiphaineVisual identification (VID)
20FamilyFamilyChouvelon, TiphaineVisual identification (VID)
21Species, unique identificationSpecies UIDChouvelon, TiphaineVisual identification (VID)
22Species, unique identification (Semantic URI)Species UID (Semantic URI)Chouvelon, TiphaineVisual identification (VID)
23Species, unique identification (URI)Species UID (URI)Chouvelon, TiphaineVisual identification (VID)
24Number of individualsInd No#Chouvelon, Tiphaineminimum per sample
25Number of individualsInd No#Chouvelon, Tiphainemaximum per sample
26ReplicatesRepl#Chouvelon, Tiphainepools of individuals
27SizeSizecmChouvelon, TiphaineFish measuring boardindividuals, minimum
28SizeSizecmChouvelon, TiphaineFish measuring boardindividuals, maximum
29SizeSizeChouvelon, Tiphainereported
30MoistureMoisture%Chouvelon, TiphaineCalculatedmean when Ind No max > 1
31Moisture, standard deviationMoisture std dev±Chouvelon, TiphaineCalculated
32Sample typeSamp typeChouvelon, Tiphaine
33ArsenicAsmg/kgChouvelon, TiphaineS-(Q)-ICP-MS measurements, Thermo Scientific iCAP-Qc ICP-MSmean when Ind No max > 1
34Arsenic, standard deviationAs std dev±Chouvelon, TiphaineCalculated
35CadmiumCdmg/kgChouvelon, TiphaineS-(Q)-ICP-MS measurements, Thermo Scientific iCAP-Qc ICP-MSmean when Ind No max > 1
36Cadmium, standard deviationCd std dev±Chouvelon, TiphaineCalculated
37CobaltComg/kgChouvelon, TiphaineS-(Q)-ICP-MS measurements, Thermo Scientific iCAP-Qc ICP-MSmean when Ind No max > 1
38Cobalt, standard deviationCo std dev±Chouvelon, TiphaineCalculated
39CopperCumg/kgChouvelon, TiphaineS-(Q)-ICP-MS measurements, Thermo Scientific iCAP-Qc ICP-MSmean when Ind No max > 1
40Copper, standard deviationCu std dev±Chouvelon, TiphaineCalculated
41IronFemg/kgChouvelon, TiphaineS-(Q)-ICP-MS measurements, Thermo Scientific iCAP-Qc ICP-MSmean when Ind No max > 1
42Iron, standard errorFe std e±Chouvelon, TiphaineCalculated
43MercuryHgmg/kgChouvelon, TiphaineAtomic absorption spectrophotometry (Altec, AMA 254)mean when Ind No max > 1
44Mercury, standard deviationHg std dev±Chouvelon, TiphaineCalculated
45ManganeseMnmg/kgChouvelon, TiphaineS-(Q)-ICP-MS measurements, Thermo Scientific iCAP-Qc ICP-MSmean when Ind No max > 1
46Manganese, standard deviationMn std dev±Chouvelon, TiphaineCalculated
47NickelNimg/kgChouvelon, TiphaineS-(Q)-ICP-MS measurements, Thermo Scientific iCAP-Qc ICP-MSmean when Ind No max > 1
48Nickel, standard deviationNi std dev±Chouvelon, TiphaineCalculated
49PhosphorusPmg/kgChouvelon, TiphaineICP-OES, Varian Vista Promean when Ind No max > 1
50Phosphorus, standard deviationP std dev±Chouvelon, TiphaineCalculated
51LeadPbmg/kgChouvelon, TiphaineS-(Q)-ICP-MS measurements, Thermo Scientific iCAP-Qc ICP-MSmean when Ind No max > 1
52Lead, standard deviationPb std dev±Chouvelon, TiphaineCalculated
53SeleniumSemg/kgChouvelon, TiphaineS-(Q)-ICP-MS measurements, Thermo Scientific iCAP-Qc ICP-MSmean when Ind No max > 1
54Selenium, standard deviationSe std dev±Chouvelon, TiphaineCalculated
55ZincZnmg/kgChouvelon, TiphaineS-(Q)-ICP-MS measurements, Thermo Scientific iCAP-Qc ICP-MSmean when Ind No max > 1
56Zinc, standard deviationZn std dev±Chouvelon, TiphaineCalculated
57Tissue descriptorTissue descriptorChouvelon, Tiphaine
58Reference/sourceReferenceChouvelon, Tiphaine
59InstitutionInstitutionChouvelon, Tiphaine
60InvestigatorInvestigatorChouvelon, Tiphaine
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0) (License comes into effect after moratorium ends)
Status:
Curation Level: Enhanced curation (CurationLevelC) * Processing Level: PANGAEA data processing level 4 (ProcLevel4)
Size:
5567 data points

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