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Glippa, Olivier; Engström-Öst, Jonna; Kanerva, Mirella; Rein, Anni; Vuori, Kristiina (2024): Seawater carbonate chemistry and oxidative stress level and antioxidant responses in the planktonic copepod of the genus Acartia [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.972145 (DOI registration in progress)

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Abstract:
We based our study on one of the most abundant zooplankton species Acartia bifilosa, which were collected from different depths (according to the depth of maximum copepod abundance) and times of day (night and day) during a two-week field survey in the western Gulf of Finland. We measured different biomarkers to reveal potential relationships between copepod antioxi dant defense, oxidative stress and the environmental condition (Chl a, pH, DIC, salinity, temperature) at different depth.
This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were provided by the author of the related paper (see Related to) to the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-09-02.
Keyword(s):
Acartia bifilosa; Acartia tonsa; Animalia; Arthropoda; Baltic Sea; Coast and continental shelf; Field observation; Other metabolic rates; Pelagos; Single species; Temperate; Zooplankton
Related to:
Glippa, Olivier; Engström-Öst, Jonna; Kanerva, Mirella; Rein, Anni; Vuori, Kristiina (2018): Oxidative stress and antioxidant defense responses in Acartia copepods in relation to environmental factors. PLoS ONE, 13(4), e0195981, https://doi.org/10.1371/journal.pone.0195981
References:
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Coverage:
Latitude: 59.882222 * Longitude: 23.253889
Date/Time Start: 2015-08-01T00:00:00 * Date/Time End: 2015-08-31T00:00:00
Minimum DEPTH, water: m * Maximum DEPTH, water: 25 m
Event(s):
Storfjarden * Latitude: 59.882222 * Longitude: 23.253889 * Date/Time Start: 2015-08-01T00:00:00 * Date/Time End: 2015-08-31T00:00:00
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Type of studyStudy typeEngström-Öst, Jonna
2SpeciesSpeciesEngström-Öst, Jonna
3Numbern#Engström-Öst, JonnaRunning
4Sampling dateSampling dateEngström-Öst, Jonna
5Local TimeLocal timeEngström-Öst, Jonnasampling
6DEPTH, waterDepth watermEngström-Öst, JonnaGeocode
7Catalase activity, per protein massCAT/protµmol/min/mgEngström-Öst, Jonna
8Oxygen reactive absorbance capacity, in Trolox EquivalentsORAC TEµmol/l/mgEngström-Öst, Jonna
9Superoxide dismutase activity, inhibitionSOD inhib%Engström-Öst, Jonna
10Glutathione reductase, per protein massGR/protnmol/min/mgEngström-Öst, Jonna
11Glutathione S-transferase, activity per protein massGST/protnmol/min/mgEngström-Öst, Jonna
12Glutathione, totalTGSHµmol/l/mgEngström-Öst, Jonna
13Glutathione, oxidizedGSSGµmol/l/mgEngström-Öst, Jonnamodified
14Lipid peroxidation, in cumene-hydroperoxide equivalentsLPX CHPµmol/l/mgEngström-Öst, Jonna
15Temperature, waterTemp°CEngström-Öst, Jonna
16Temperature, water, standard deviationTemp std dev±Engström-Öst, Jonna
17SalinitySalEngström-Öst, Jonna
18Salinity, standard deviationSal std dev±Engström-Öst, Jonna
19OxygenO2mg/lEngström-Öst, Jonna
20Oxygen, standard deviationO2 std dev±Engström-Öst, Jonna
21pHpHEngström-Öst, JonnaNBS scale
22Temperature, waterTemp°CEngström-Öst, JonnapH measurement
23Carbon, inorganic, dissolvedDICµmol/lEngström-Öst, Jonna
24Carbon, inorganic, dissolved, standard deviationDIC std dev±Engström-Öst, Jonna
25Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
26pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
27Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Size:
816 data points

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