Citation:

PANGAEA.969325

Name: Seawater carbonate chemistry and red king crab larval survival and development
Published: 2024-06-25
License: https://creativecommons.org/licenses/by/4.0/
Keywords: Animalia; Arthropoda; Biomass/Abundance/Elemental composition; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Development; Growth/Morphology; Laboratory experiment; Mortality/Survival; North Pacific; Other; Pelagos; Single species; Temperate; Zooplankton

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Published: 2024-06-25 • DOI registered: 2024-07-24

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Abstract:

In this study, we reared red king crab larvae from hatching to the first crab stage in four different pH treatments: current surface ambient, diel fluctuation to mimic larval migration between the surface and mixed layer under current ambient conditions, pH 7.8, and pH 7.5. Larvae were monitored throughout development and the average length of each stage was determined. At each of the zoeal stages, the glaucothoe stage, and the first crab stage, we measured survival, morphometry, dry mass, and carbon, nitrogen, calcium, and magnesium content.

This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from NOAA National Centers for Environmental Information (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-06-24.

Keyword(s):

Animalia; Arthropoda; Biomass/Abundance/Elemental composition; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Development; Growth/Morphology; Laboratory experiment; Mortality/Survival; North Pacific; Other; Pelagos; Single species; Temperate; Zooplankton

Related to:

Long, W Christopher; Conrad, Alexandra L; Gardner, Jennifer L; Foy, Robert J (2024): Red king crab larval survival and development are resilient to ocean acidification. Journal of Experimental Marine Biology and Ecology, 577, 152028, https://doi.org/10.1016/j.jembe.2024.152028

Source:

Long, W Christopher; Swiney, Katherine M; Foy, Robert J (2024): Observations of larval red king crab (Paralithodes camtschatica) survival and conditions in laboratory experiments for the Physiological Response of Commercially Important Crab Species to Predicted Increases in pCO2 project in Kodiak, Alaska from 2017-04-10 to 2017-07-08 (NCEI Accession 0292530) [dataset]. NOAA National Centers for Environmental Information, https://doi.org/10.25921/9K0S-4905

References:

Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010

Related code / software:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Type of study	Study type		Long, W Christopher
2	Identification	ID		Long, W Christopher		tank
3	Treatment	Treat		Long, W Christopher
4	Survival	Survival	%	Long, W Christopher
5	Stage	Stage		Long, W Christopher		Z1, Z2, Z3, Z4 (zoea 1-4), G (Glaucothoe), C1 (First crab stage)
6	Carbon	C	%	Long, W Christopher
7	Nitrogen	N	%	Long, W Christopher
8	Calcium	Ca	%	Long, W Christopher
9	Magnesium	Mg	%	Long, W Christopher
10	Sampling date/time, experiment	Date/time sampling exp		Long, W Christopher
11	Larvae	Larvae		Long, W Christopher
12	Length	l	mm	Long, W Christopher		Rostrum Spine
13	Carapace, length	Carap l	mm	Long, W Christopher
14	Length	l	mm	Long, W Christopher		total
15	Height	h	mm	Long, W Christopher		Carapace
16	Telson, length	Telson l	mm	Long, W Christopher		Telson Spine
17	Carapace, length	Carap l	mm	Long, W Christopher
18	Carapace width	Carap w	mm	Long, W Christopher
19	Length	l	mm	Long, W Christopher		Orbital Spine
20	Width	w	mm	Long, W Christopher		Rostrum
21	Length	l	mm	Long, W Christopher		1st Spine
22	Larvae, dry mass	Larvae dm	g	Long, W Christopher
23	Experiment day	Exp day	day	Long, W Christopher
24	Accumulated degree days	ADD	°C	Long, W Christopher
25	Temperature, water	Temp	°C	Long, W Christopher
26	Temperature, water, standard deviation	Temp std dev	±	Long, W Christopher
27	Salinity	Sal		Long, W Christopher
28	Salinity, standard deviation	Sal std dev	±	Long, W Christopher
29	pH, total scale	pHT		Long, W Christopher		total scale
30	pH, standard deviation	pH std dev	±	Long, W Christopher		total scale
31	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Long, W Christopher	Calculated with seacarb package in R
32	Partial pressure of carbon dioxide, standard deviation	pCO2 std dev	±	Long, W Christopher	Calculated with seacarb package in R
33	Bicarbonate ion	[HCO3]-	µmol/kg	Long, W Christopher	Calculated with seacarb package in R
34	Bicarbonate ion, standard deviation	[HCO3]- std dev	±	Long, W Christopher	Calculated with seacarb package in R
35	Carbonate ion	[CO3]2-	µmol/kg	Long, W Christopher	Calculated with seacarb package in R
36	Carbonate ion, standard deviation	[CO3]2- std dev	±	Long, W Christopher	Calculated with seacarb package in R
37	Carbon, inorganic, dissolved	DIC	µmol/kg	Long, W Christopher
38	Carbon, inorganic, dissolved, standard deviation	DIC std dev	±	Long, W Christopher
39	Alkalinity, total	AT	µmol/kg	Long, W Christopher
40	Alkalinity, total, standard deviation	AT std dev	±	Long, W Christopher
41	Aragonite saturation state	Omega Arg		Long, W Christopher	Calculated with seacarb package in R
42	Aragonite saturation state, standard deviation	Omega Arg std dev	±	Long, W Christopher	Calculated with seacarb package in R
43	Calcite saturation state	Omega Cal		Long, W Christopher	Calculated with seacarb package in R
44	Calcite saturation state, standard deviation	Omega Cal std dev	±	Long, W Christopher	Calculated with seacarb package in R
45	Temperature, water	Temp	°C	Long, W Christopher
46	Temperature, water, standard deviation	Temp std dev	±	Long, W Christopher
47	Salinity	Sal		Long, W Christopher
48	Salinity, standard deviation	Sal std dev	±	Long, W Christopher
49	pH, total scale	pHT		Long, W Christopher		total scale
50	pH, standard deviation	pH std dev	±	Long, W Christopher		total scale
51	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Long, W Christopher	Calculated with seacarb package in R	Diel AM
52	Partial pressure of carbon dioxide, standard deviation	pCO2 std dev	±	Long, W Christopher	Calculated with seacarb package in R	Diel AM
53	Bicarbonate ion	[HCO3]-	µmol/kg	Long, W Christopher	Calculated with seacarb package in R	Diel AM
54	Bicarbonate ion, standard deviation	[HCO3]- std dev	±	Long, W Christopher	Calculated with seacarb package in R	Diel AM
55	Carbonate ion	[CO3]2-	µmol/kg	Long, W Christopher	Calculated with seacarb package in R	Diel AM
56	Carbonate ion, standard deviation	[CO3]2- std dev	±	Long, W Christopher	Calculated with seacarb package in R	Diel AM
57	Carbon, inorganic, dissolved	DIC	µmol/kg	Long, W Christopher
58	Carbon, inorganic, dissolved, standard deviation	DIC std dev	±	Long, W Christopher
59	Alkalinity, total	AT	µmol/kg	Long, W Christopher
60	Alkalinity, total, standard deviation	AT std dev	±	Long, W Christopher
61	Aragonite saturation state	Omega Arg		Long, W Christopher	Calculated with seacarb package in R	Diel AM
62	Aragonite saturation state, standard deviation	Omega Arg std dev	±	Long, W Christopher	Calculated with seacarb package in R	Diel AM
63	Calcite saturation state	Omega Cal		Long, W Christopher	Calculated with seacarb package in R	Diel AM
64	Calcite saturation state, standard deviation	Omega Cal std dev	±	Long, W Christopher	Calculated with seacarb package in R	Diel AM
65	Temperature, water	Temp	°C	Long, W Christopher
66	Temperature, water, standard deviation	Temp std dev	±	Long, W Christopher
67	Salinity	Sal		Long, W Christopher
68	Salinity, standard deviation	Sal std dev	±	Long, W Christopher
69	pH	pH		Long, W Christopher		total scal
70	pH, standard deviation	pH std dev	±	Long, W Christopher
71	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Long, W Christopher	Calculated with seacarb package in R	Diel PM
72	Partial pressure of carbon dioxide, standard deviation	pCO2 std dev	±	Long, W Christopher	Calculated with seacarb package in R	Diel PM
73	Bicarbonate ion	[HCO3]-	µmol/kg	Long, W Christopher	Calculated with seacarb package in R	Diel PM
74	Bicarbonate ion, standard deviation	[HCO3]- std dev	±	Long, W Christopher	Calculated with seacarb package in R	Diel PM
75	Carbonate ion	[CO3]2-	µmol/kg	Long, W Christopher	Calculated with seacarb package in R	Diel PM
76	Carbonate ion, standard deviation	[CO3]2- std dev	±	Long, W Christopher	Calculated with seacarb package in R	Diel PM
77	Carbon, inorganic, dissolved	DIC	µmol/kg	Long, W Christopher
78	Carbon, inorganic, dissolved, standard deviation	DIC std dev	±	Long, W Christopher
79	Alkalinity, total	AT	µmol/kg	Long, W Christopher
80	Alkalinity, total, standard deviation	AT std dev	±	Long, W Christopher
81	Aragonite saturation state	Omega Arg		Long, W Christopher	Calculated with seacarb package in R	Diel PM
82	Aragonite saturation state, standard deviation	Omega Arg std dev	±	Long, W Christopher	Calculated with seacarb package in R	Diel PM
83	Calcite saturation state	Omega Cal		Long, W Christopher	Calculated with seacarb package in R	Diel PM
84	Calcite saturation state, standard deviation	Omega Cal std dev	±	Long, W Christopher	Calculated with seacarb package in R	Diel PM
85	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
86	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
87	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
88	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
89	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
90	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
91	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
92	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
93	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
94	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Diel AM
95	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Diel AM
96	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Diel AM
97	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Diel AM
98	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Diel AM
99	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Diel AM
100	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Diel AM
101	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Diel AM
102	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Diel PM
103	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Diel PM
104	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Diel PM
105	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Diel PM
106	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Diel PM
107	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Diel PM
108	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Diel PM
109	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Diel PM

License:

Creative Commons Attribution 4.0 International (CC-BY-4.0)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

331038 data points

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