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Kelly, Kyla J; Mansour, Amjad; Liang, Chen; Kim, Andrew M; Mancini, Lily A; Bertin, Matthew J; Jenkins, Bethany D; Hutchins, David A; Fu, Feixue (2024): Seawater carbonate chemistry and Pseudo-nitzschia australis growth and toxicity [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.967107

Always quote citation above when using data! You can download the citation in several formats below.

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Abstract:
To gain a better understanding of what drives Pseudo-nitzschia australis growth and toxicity during upwelling and marine heatwave events, multiple-driver scenario or 'cluster' experiments were conducted using temperature, pCO2, and nutrient levels reflecting conditions during upwelling (13 ◦C, 900 ppm pCO2, replete nutrients) and two intensities of marine heatwaves (19 ◦C or 20.5 ◦C, 250 ppm pCO2, reduced macronutrients). We also conducted single-driver experiments to gain a mechanistic
understanding of which drivers most impact P. australis growth and toxicity.
Keyword(s):
Bacillariophyta; Bottles or small containers/Aquaria (<20 L); Chromista; Growth/Morphology; Immunology/Self-protection; Laboratory experiment; Laboratory strains; Macro-nutrients; Not applicable; Other studied parameter or process; Pelagos; Phytoplankton; Primary production/Photosynthesis; Pseudo-nitzschia australis; Single species; Temperature
Related to:
Kelly, Kyla J; Mansour, Amjad; Liang, Chen; Kim, Andrew M; Mancini, Lily A; Bertin, Matthew J; Jenkins, Bethany D; Hutchins, David A; Fu, Feixue (2023): Simulated upwelling and marine heatwave events promote similar growth rates but differential domoic acid toxicity in Pseudo-nitzschia australis. Harmful Algae, 127, 102467, https://doi.org/10.1016/j.hal.2023.102467
Source:
Kelly, Kyla J; Fu, Feixue; Hutchins, David A; Bertin, Matthew J; Mansour, Amjad; Mancini, Lily A; Jenkins, Bethany D; Liang, Chen; Kim, Andrew M (2023): Cluster (combined temperature, nutrient concentration, and CO2) results from laboratory experiments with Pseudo-nitzschia australis conducted from 2021 to 2022. Biological and Chemical Oceanography Data Management Office (BCO-DMO), https://doi.org/10.26008/1912/BCO-DMO.906949.1
Kelly, Kyla J; Fu, Feixue; Hutchins, David A; Bertin, Matthew J; Mansour, Amjad; Mancini, Lily A; Jenkins, Bethany D; Liang, Chen; Kim, Andrew M (2023): CO2 experiment physiology and carbonate chemistry from laboratory experiments with Pseudo-nitzschia australis conducted from 2021 to 2022. Biological and Chemical Oceanography Data Management Office (BCO-DMO), https://doi.org/10.26008/1912/BCO-DMO.906938.1
Kelly, Kyla J; Fu, Feixue; Hutchins, David A; Bertin, Matthew J; Mansour, Amjad; Mancini, Lily A; Jenkins, Bethany D; Liang, Chen; Kim, Andrew M (2023): N:P ratio experiment physiology and carbonate chemistry laboratory experiments with Pseudo-nitzschia australis conducted from 2021 to 2022. Biological and Chemical Oceanography Data Management Office (BCO-DMO), https://doi.org/10.26008/1912/BCO-DMO.906858.1
Kelly, Kyla J; Fu, Feixue; Hutchins, David A; Bertin, Matthew J; Mansour, Amjad; Mancini, Lily A; Jenkins, Bethany D; Liang, Chen; Kim, Andrew M (2023): Single-factor temperature experiment physiology and carbonate chemistry from laboratory experiments with Pseudo-nitzschia australis conducted from 2021 to 2022. Biological and Chemical Oceanography Data Management Office (BCO-DMO), https://doi.org/10.26008/1912/BCO-DMO.906927.1
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-04-03.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
Type of studyStudy typeKelly, Kyla J
Species, unique identificationSpecies UIDKelly, Kyla J
Species, unique identification (URI)Species UID (URI)Kelly, Kyla J
Species, unique identification (Semantic URI)Species UID (Semantic URI)Kelly, Kyla J
TreatmentTreatKelly, Kyla J
ReplicateReplKelly, Kyla J
Growth rateµ1/dayKelly, Kyla J
Particulate domoic acid per particulate organic carbonP DA/POCng/µmolKelly, Kyla J
Domoic acid per cellDA/cellpg/#Kelly, Kyla JParticulate
10 Domoic acid production per particulate organic carbonDA prod/POCng/µmol/dayKelly, Kyla J
11 Net primary production of carbon per particulate organic carbonNPP C/POCµmol/µmol/hKelly, Kyla J
12 Net primary production of carbon per particulate organic nitrogenNPP C/PONµmol/µmol/hKelly, Kyla J
13 Carbon, inorganic, dissolvedDICµmol/kgKelly, Kyla J
14 pHpHKelly, Kyla Jtotal scale
15 Alkalinity, totalATµmol/kgKelly, Kyla JCalculated using CO2SYS
16 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmKelly, Kyla JCalculated using CO2SYS
17 Temperature, waterTemp°CKelly, Kyla J
18 SalinitySalKelly, Kyla J
19 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
20 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
21 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
22 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
23 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
24 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
25 Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
26 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
27 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
867 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Study type

Species UID

Species UID (URI)

Species UID (Semantic URI)

Treat

Repl

µ [1/day]

P DA/POC [ng/µmol]

DA/cell [pg/#]
(Particulate)
10 
DA prod/POC [ng/µmol/day]
11 
NPP C/POC [µmol/µmol/h]
12 
NPP C/PON [µmol/µmol/h]
13 
DIC [µmol/kg]
14 
pH
(total scale)
15 
AT [µmol/kg]
(Calculated using CO2SYS)
16 
pCO2water_SST_wet [µatm]
(Calculated using CO2SYS)
17 
Temp [°C]
18 
Sal
19 
CSC flag
(Calculated using seacarb afte...)
20 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
21 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
22 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
23 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
24 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
25 
AT [µmol/kg]
(Calculated using seacarb afte...)
26 
Omega Arg
(Calculated using seacarb afte...)
27 
Omega Cal
(Calculated using seacarb afte...)
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Upwelling10.359381.120400.892540.402640.010980.083132077.67.7133.700000858.700000013.033935.79888.26891.571975.3266.492141.841.021.60
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Upwelling20.375730.870902.296470.327210.011390.071852110.47.6932.200000916.500000013.033938.09945.41948.922007.7764.542168.990.991.56
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Upwelling30.360440.712204.212300.256710.012160.088082106.07.6932.900000892.200000013.033938.01943.43946.952003.5864.412164.540.991.55
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Heatwave10.418150.000000.000000.000000.011020.084691785.28.2494.100000226.700000019.03397.24214.96215.701554.88223.072111.383.495.41
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Heatwave20.430070.000000.000000.000000.012390.090001781.68.2490.800000234.600000019.03397.23214.52215.261551.75222.632107.343.495.40
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Heatwave30.467750.000000.000000.000000.014610.121441790.78.2595.700000226.500000019.03397.08210.12210.841555.29228.332124.213.585.54
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Extreme heatwave10.184630.000000.000000.000000.006220.045231765.38.2090.800000214.100000020.53397.64236.31237.111543.94213.732078.143.375.19
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Extreme heatwave20.190330.000000.000000.000000.004370.031851781.88.2798.300000247.700000020.53396.43198.93199.601527.01248.362144.073.916.03
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Extreme heatwave30.139780.191900.000020.026831814.18.2696.600000258.800000020.53396.72207.89208.601559.51247.872173.593.906.02
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604LTCN10.121670.537900.000030.065440.004430.042971869.18.2090.800000251.900000013.03399.87245.05245.961684.05175.182123.212.694.23
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604LTCN20.275470.546200.000030.150460.006850.073331885.18.2089.200000264.700000013.03399.96247.15248.071698.47176.672140.632.724.26
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604LTCN30.277820.508800.000020.141340.006110.063441851.48.2090.200000246.300000013.03399.78242.73243.641668.10173.522103.942.674.19
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Pre-industrial10.688125.150683.544301865.08.242202.415527224.896301319.03397.57224.56225.341624.39233.052200.823.655.65
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Pre-industrial20.634565.809753.686611878.08.252223.796631220.708389319.03397.42220.36221.121631.11239.462222.293.755.81
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Pre-industrial30.626381910.08.382359.554688159.694793719.03395.36159.22159.771589.79314.842358.514.937.63
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Ocean acidification10.839481.501851.260772052.07.902218.560547576.321350119.033919.44576.91578.901907.48125.092216.161.963.03
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Ocean acidification20.963953.021982.913022073.07.892236.264404596.445068419.033920.12597.09599.151929.25123.632233.871.943.00
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Ocean acidification30.740801.075600.796812049.07.882206.892822603.922729519.033920.37604.61606.691909.07119.562204.411.872.90
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Extreme ocean acidification10.690002.777531.925002147.07.672229.7463381042.189209019.033935.191044.371047.972033.3078.522226.811.231.90
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Extreme ocean acidification20.819875.774774.735002184.07.682270.8376461035.563354019.033934.961037.691041.272067.3581.692267.981.281.98
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=10, low nutrients, 13C10.491600.18167
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=10, low nutrients, 13C20.509040.05649
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=10, low nutrients, 13C30.513530.10769
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=50, low nutrients, 13C10.660880.66300
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=50, low nutrients, 13C20.685370.79200
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=50, low nutrients, 13C30.568310.68700
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=10, high nutrients, 13C10.565340.15685
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=10, high nutrients, 13C20.531350.20078
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=10, high nutrients, 13C30.531360.13100
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=50, high nutrients, 13C10.725551.35144
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=50, high nutrients, 13C20.630141.23019
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=50, high nutrients, 13C30.667272.47689
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=10, low nutrients, 19C10.538510.07365
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=10, low nutrients, 19C20.588570.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=10, low nutrients, 19C30.522920.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=50, low nutrients, 19C10.778890.15200
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=50, low nutrients, 19C20.792940.10300
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=50, low nutrients, 19C30.778660.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=10, high nutrients, 19C10.575530.49383
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=10, high nutrients, 19C20.593780.18402
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=10, high nutrients, 19C30.602970.36345
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=50, high nutrients, 19C10.645681.93000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=50, high nutrients, 19C20.673632.82000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=50, high nutrients, 19C30.67260
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=5, low nutrients, 13C10.491600.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=5, low nutrients, 13C20.509040.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=5, low nutrients, 13C30.513530.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=5, high nutrients, 13C10.565340.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=5, high nutrients, 13C20.531350.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=5, high nutrients, 13C30.531360.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=5, low nutrients, 19C10.538510.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=5, low nutrients, 19C20.588570.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=5, low nutrients, 19C30.522920.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=5, high nutrients, 13C10.575530.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=5, high nutrients, 13C20.593780.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604N:P=5, high nutrients, 13C30.602970.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=80.025650.000000.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=80.023450.000000.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=80.039990.000000.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=110.204393.819800.78075
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=110.192193.103200.59641
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=110.204423.649480.74603
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=120.229531.687350.38729
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=120.234741.817550.42666
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=120.250683.268230.81927
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=140.302492.462100.74477
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=140.298832.386940.71328
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=140.308922.658410.82123
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=150.330071.643400.54244
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=150.331942.279370.75661
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=150.312962.566280.80315
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=170.329912.261070.74596
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=170.329341.810350.59621
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=170.316251.642900.51956
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=180.339652.171010.73738
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=180.333942.286830.76367
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=180.365592.209120.80764
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=190.295691.006920.29774
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=190.302271.049010.31708
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=190.301520.909790.27431
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=200.160280.792780.12707
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=200.209451.088120.22791
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=200.196521.286000.25272
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=230.000000.000000.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=230.000000.000000.00000
laboratoryPseudo-nitzschia australismarinespecies.orgurn:lsid:marinespecies.org:taxname:246604Temperature=230.000000.000000.00000