Leys, Sally P; Federwisch, Luisa (2024): Ultrastructure micrographs of Antarctic deep-water sponges collected for microbiome study during expedition JR17003a in the western Weddell Sea [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.966335, In: Federwisch, Luisa; Leys, Sally P; Janussen, Dorte; Linse, Katrin; Hentschel, Ute; Busch, Kathrin (2024): Images and microbiome data of Antarctic deep-water sponges (Demospongiae and Hexactinellida) collected during expeditions PS96 and JR17003a in the Weddell Sea, Antarctica [dataset bundled publication]. PANGAEA, https://doi.org/10.1594/PANGAEA.965868
Always quote citation above when using data! You can download the citation in several formats below.
Abstract:
This image dataset provides ultrastructural micrographs of Antarctic deep-water sponges (Demospongiae and Hexactinellida) collected for study of microbial symbionts and histology during expedition JR17003a (RRS James Clark Ross, 2018) in Prince Gustav Channel, western Weddell Sea. Formalin-fixed sponge tissues were rinsed twice in PBS and postfixed in 1% osmium tetroxide in phosphate buffer for 6 hours at 4°C. Tissues were then rinsed twice in distilled water, dehydrated through to 100% ethanol and embedded in epoxy (TAAB 812). Ultrastructural sections of 60 nm were cut with a Leica Ultracut T microtome, stained in uranyl acetate and lead citrate, and then viewed and photographed with a Philips Morgagni transmission electron microscope equipped with a Gatan CCD camera. Image files are labeled with expedition, station and sample ID. Each image includes a scale.
Keyword(s):
Project(s):
Bentho-Pelagic Processes @ AWI (AWI_BPP)
Coverage:
Median Latitude: -63.826788 * Median Longitude: -58.016557 * South-bound Latitude: -64.057780 * West-bound Longitude: -58.477560 * North-bound Latitude: -63.615860 * East-bound Longitude: -57.501430
Date/Time Start: 2018-03-05T14:18:00 * Date/Time End: 2018-03-07T17:54:00
Minimum Elevation: -845.0 m * Maximum Elevation: -429.0 m
Event(s):
JR17003A_38 * Latitude Start: -64.053780 * Longitude Start: -58.476010 * Latitude End: -64.057780 * Longitude End: -58.477560 * Date/Time: 2018-03-05T14:18:00 * Elevation Start: -787.0 m * Elevation End: -740.0 m * Location: Prince Gustav Channel * Campaign: JR17003A * Basis: James Clark Ross * Method/Device: Agassiz Trawl (AGT)
JR17003A_46 * Latitude Start: -63.806030 * Longitude Start: -58.065230 * Latitude End: -63.810580 * Longitude End: -58.070640 * Date/Time: 2018-03-06T17:48:00 * Elevation Start: -845.0 m * Elevation End: -825.0 m * Location: Prince Gustav Channel * Campaign: JR17003A * Basis: James Clark Ross * Method/Device: Agassiz Trawl (AGT)
JR17003A_52 * Latitude Start: -63.615860 * Longitude Start: -57.501430 * Latitude End: -63.616700 * Longitude End: -57.508470 * Date/Time: 2018-03-07T17:54:00 * Elevation Start: -489.0 m * Elevation End: -429.0 m * Location: Prince Gustav Channel * Campaign: JR17003A * Basis: James Clark Ross * Method/Device: Agassiz Trawl (AGT)
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Event label | Event | Federwisch, Luisa | |||
| 2 | Latitude of event | Latitude | Federwisch, Luisa | |||
| 3 | Longitude of event | Longitude | Federwisch, Luisa | |||
| 4 | Elevation of event | Elevation | m | Federwisch, Luisa | ||
| 5 | Sample ID | Sample ID | Federwisch, Luisa | |||
| 6 | Image number/name | Image no/name | Federwisch, Luisa | |||
| 7 | Image | IMAGE | Federwisch, Luisa | Transmission electron microscope (TEM) |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Status:
Curation Level: Basic curation (CurationLevelB)
Size:
360 data points
Data
All files referred to in data matrix can be downloaded in one go as ZIP or TAR. Be careful: This download can be very large! To protect our systems from misuse, we require to sign up for an user account before downloading.
| 1 Event | 2 Latitude | 3 Longitude | 4 Elevation [m] | 5 Sample ID | 6 Image no/name | 7 IMAGE |
|---|---|---|---|---|---|---|
| JR17003A_38 | -64.0538 | -58.4760 | -787 | 104 | 01 | JR17003a_38_ID104_01.tif |
| JR17003A_38 | -64.0538 | -58.4760 | -787 | 104 | 02 | JR17003a_38_ID104_02.tif |
| JR17003A_38 | -64.0538 | -58.4760 | -787 | 104 | 03 | JR17003a_38_ID104_03.tif |
| JR17003A_38 | -64.0538 | -58.4760 | -787 | 104 | 04 | JR17003a_38_ID104_04.tif |
| JR17003A_38 | -64.0538 | -58.4760 | -787 | 104 | 05 | JR17003a_38_ID104_05.tif |
| JR17003A_38 | -64.0538 | -58.4760 | -787 | 104 | 06 | JR17003a_38_ID104_06.tif |
| JR17003A_38 | -64.0538 | -58.4760 | -787 | 104 | 07 | JR17003a_38_ID104_07.tif |
| JR17003A_38 | -64.0538 | -58.4760 | -787 | 104 | 08 | JR17003a_38_ID104_08.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 01 | JR17003a_46_ID282_01.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 02 | JR17003a_46_ID282_02.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 03 | JR17003a_46_ID282_03.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 04 | JR17003a_46_ID282_04.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 05 | JR17003a_46_ID282_05.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 06 | JR17003a_46_ID282_06.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 07 | JR17003a_46_ID282_07.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 08 | JR17003a_46_ID282_08.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 09 | JR17003a_46_ID282_09.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 10 | JR17003a_46_ID282_10.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 11 | JR17003a_46_ID282_11.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 12 | JR17003a_46_ID282_12.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 13 | JR17003a_46_ID282_13.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 14 | JR17003a_46_ID282_14.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 15 | JR17003a_46_ID282_15.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 16 | JR17003a_46_ID282_16.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 17 | JR17003a_46_ID282_17-bl2.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 18 | JR17003a_46_ID282_18-bl2.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 19 | JR17003a_46_ID282_19-bl2.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 20 | JR17003a_46_ID282_20-bl2.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 21 | JR17003a_46_ID282_21-bl2.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 22 | JR17003a_46_ID282_22-bl2.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 23 | JR17003a_46_ID282_23-bl2.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 24 | JR17003a_46_ID282_24-bl2.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 282 | 25 | JR17003a_46_ID282_25-bl2.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 283 | 01 | JR17003a_46_ID283_01.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 283 | 02 | JR17003a_46_ID283_02.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 283 | 03 | JR17003a_46_ID283_03.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 283 | 04 | JR17003a_46_ID283_04.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 283 | 05 | JR17003a_46_ID283_05.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 283 | 06 | JR17003a_46_ID283_06.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 283 | 07 | JR17003a_46_ID283_07.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 283 | 08 | JR17003a_46_ID283_08.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 283 | 09 | JR17003a_46_ID283_09.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 283 | 10 | JR17003a_46_ID283_10.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 283 | 11 | JR17003a_46_ID283_11.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 303 | 01 | JR17003a_46_ID303_01.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 303 | 02 | JR17003a_46_ID303_02.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 303 | 03 | JR17003a_46_ID303_03.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 303 | 04 | JR17003a_46_ID303_04.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 303 | 05 | JR17003a_46_ID303_05.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 303 | 06 | JR17003a_46_ID303_06.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 303 | 07 | JR17003a_46_ID303_07.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 303 | 08 | JR17003a_46_ID303_08.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 303 | 09 | JR17003a_46_ID303_09.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 303 | 10 | JR17003a_46_ID303_10.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 303 | 11 | JR17003a_46_ID303_11.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 303 | 12 | JR17003a_46_ID303_12.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 303 | 13 | JR17003a_46_ID303_13.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 01 | JR17003a_46_ID304_01.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 02 | JR17003a_46_ID304_02.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 03 | JR17003a_46_ID304_03.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 04 | JR17003a_46_ID304_04.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 05 | JR17003a_46_ID304_05.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 06 | JR17003a_46_ID304_06.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 07 | JR17003a_46_ID304_07.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 08 | JR17003a_46_ID304_08.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 09 | JR17003a_46_ID304_09.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 10 | JR17003a_46_ID304_10.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 11 | JR17003a_46_ID304_11.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 12 | JR17003a_46_ID304_12.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 13 | JR17003a_46_ID304_13.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 14 | JR17003a_46_ID304_14.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 15 | JR17003a_46_ID304_15.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 16 | JR17003a_46_ID304_16.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 17 | JR17003a_46_ID304_17.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 304 | 18 | JR17003a_46_ID304_18.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 350 | 01 | JR17003a_46_ID350_01.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 350 | 02 | JR17003a_46_ID350_02.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 01 | JR17003a_46_ID353_01.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 02 | JR17003a_46_ID353_02.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 03 | JR17003a_46_ID353_03.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 04 | JR17003a_46_ID353_04.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 05 | JR17003a_46_ID353_05.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 06 | JR17003a_46_ID353_06.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 07 | JR17003a_46_ID353_07.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 08 | JR17003a_46_ID353_08.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 09 | JR17003a_46_ID353_09.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 10 | JR17003a_46_ID353_10.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 11 | JR17003a_46_ID353_11.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 12 | JR17003a_46_ID353_12.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 13 | JR17003a_46_ID353_13.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 14 | JR17003a_46_ID353_14.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 15 | JR17003a_46_ID353_15.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 16 | JR17003a_46_ID353_16.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 17 | JR17003a_46_ID353_17.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 18 | JR17003a_46_ID353_18.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 19 | JR17003a_46_ID353_19.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 20 | JR17003a_46_ID353_20.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 21 | JR17003a_46_ID353_21.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 22 | JR17003a_46_ID353_22.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 23 | JR17003a_46_ID353_23.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 24 | JR17003a_46_ID353_24.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 25 | JR17003a_46_ID353_25.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 26 | JR17003a_46_ID353_26.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 27 | JR17003a_46_ID353_27.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 28 | JR17003a_46_ID353_28.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 29 | JR17003a_46_ID353_29.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 30 | JR17003a_46_ID353_30.tif |
| JR17003A_46 | -63.8060 | -58.0652 | -845 | 353 | 31 | JR17003a_46_ID353_31.tif |
| JR17003A_52 | -63.6159 | -57.5014 | -489 | 398 | 01 | JR17003a_52_ID398_01.tif |
| JR17003A_52 | -63.6159 | -57.5014 | -489 | 398 | 02 | JR17003a_52_ID398_02.tif |
| JR17003A_52 | -63.6159 | -57.5014 | -489 | 398 | 03 | JR17003a_52_ID398_03.tif |
| JR17003A_52 | -63.6159 | -57.5014 | -489 | 398 | 04 | JR17003a_52_ID398_04.tif |
| JR17003A_52 | -63.6159 | -57.5014 | -489 | 398 | 05 | JR17003a_52_ID398_05.tif |
| JR17003A_52 | -63.6159 | -57.5014 | -489 | 398 | 06 | JR17003a_52_ID398_06.tif |
| JR17003A_52 | -63.6159 | -57.5014 | -489 | 398 | 07 | JR17003a_52_ID398_07.tif |
| JR17003A_52 | -63.6159 | -57.5014 | -489 | 398 | 08 | JR17003a_52_ID398_08.tif |
| JR17003A_52 | -63.6159 | -57.5014 | -489 | 398 | 09 | JR17003a_52_ID398_09.tif |
| JR17003A_52 | -63.6159 | -57.5014 | -489 | 398 | 10 | JR17003a_52_ID398_10.tif |
| JR17003A_52 | -63.6159 | -57.5014 | -489 | 398 | 11 | JR17003a_52_ID398_11.tif |
| JR17003A_52 | -63.6159 | -57.5014 | -489 | 398 | 12 | JR17003a_52_ID398_12.tif |