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Federwisch, Luisa; Linse, Katrin; Hentschel, Ute; Busch, Kathrin (2024): Environmental data and metadata of water samples collected for microbiome study during expeditions PS96 and JR17003a in the Weddell Sea [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.965890, In: Federwisch, Luisa; Leys, Sally P; Janussen, Dorte; Linse, Katrin; Hentschel, Ute; Busch, Kathrin (2024): Images and microbiome data of Antarctic deep-water sponges (Demospongiae and Hexactinellida) collected during expeditions PS96 and JR17003a in the Weddell Sea, Antarctica [dataset bundled publication]. PANGAEA, https://doi.org/10.1594/PANGAEA.965868

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Abstract:
This dataset provides metadata of bottom water samples collected for microbiome analysis during expeditions PS96 (RV Polarstern, 2015/16) and JR17003a (RRS James Clark Ross, 2018) in the Weddell Sea, Antarctica, as well as environmental data of the respective stations. It includes information on sampling locations, number of bacterial sequences and amplicon sequence variants (ASVs), and NCBI accession numbers for raw sequencing data. Environmental data of PS96 stations were obtained from: Schröder, Michael; Ryan, Svenja; Wisotzki, Andreas (2016): Physical oceanography measured on water bottle samples during POLARSTERN cruise PS96 (ANT-XXXI/2 FROSN). Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.859035
Keyword(s):
Antarctic; environmental data; JR17003a; microbiome; PS96; water; Water samples; Weddell Sea
Further details:
Linse, Katrin; Shipboard Scientific Party (2018): Larsen-C Benthos Benthic biodiversity under Antarctic ice-shelves - baseline assessment of the seabed exposed by the 2017 calving of the Larsen-C Ice Shelf, RRS James Clark Ross JR17003a Cruise Report. British Antarctic Survey Cruise Report, 175 pp, https://www.bodc.ac.uk/resources/inventories/cruise_inventory/report/16954/
Schröder, Michael (2016): The Expedition PS96 of the Research Vessel POLARSTERN to the southern Weddell Sea in 2015/2016. Berichte zur Polar- und Meeresforschung = Reports on Polar and Marine Research, 700, 142 pp, https://doi.org/10.2312/BzPM_0700_2016
Project(s):
Coverage:
Median Latitude: -66.946470 * Median Longitude: -48.988703 * South-bound Latitude: -74.992670 * West-bound Longitude: -58.452710 * North-bound Latitude: -63.615510 * East-bound Longitude: -26.198670
Date/Time Start: 2015-12-29T11:14:00 * Date/Time End: 2018-03-06T13:27:00
Minimum DEPTH, water: 205 m * Maximum DEPTH, water: 1230 m
Event(s):
JR17003a_9 * Latitude: -63.615510 * Longitude: -57.498630 * Date/Time: 2018-03-02T09:25:00 * Elevation: -496.0 m * Location: Duse Bay * Campaign: JR17003A * Basis: James Clark Ross * Method/Device: CTD/Rosette (CTD-RO)
JR17003A_12 * Latitude: -63.625100 * Longitude: -57.487700 * Date/Time: 2018-03-02T13:57:00 * Elevation: -205.0 m * Location: Duse Bay * Campaign: JR17003A * Basis: James Clark Ross * Method/Device: CTD/Rosette (CTD-RO)
JR17003A_19 * Latitude: -64.041200 * Longitude: -58.452700 * Date/Time: 2018-03-03T10:20:00 * Elevation: -793.0 m * Location: Prince Gustav Channel * Campaign: JR17003A * Basis: James Clark Ross * Method/Device: CTD/Rosette (CTD-RO)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventFederwisch, Luisa
2Sample IDSample IDFederwisch, Luisa
3Sample typeSamp typeFederwisch, Luisa
4Cruise/expeditionExpeditionFederwisch, Luisa
5SiteSiteFederwisch, Luisa
6Ocean and sea regionOS regionFederwisch, Luisa
7LATITUDELatitudeFederwisch, LuisaGeocode
8LONGITUDELongitudeFederwisch, LuisaGeocode
9DEPTH, waterDepth watermFederwisch, LuisaGeocode
10SalinitySalFederwisch, Luisa
11Temperature, waterTemp°CFederwisch, Luisa
12Oxygen saturationO2 sat%Federwisch, Luisa
13OxygenO2µmol/lFederwisch, Luisa
14Height above sea floor/altitudeHeight above sea floormFederwisch, Luisa
15DATE/TIMEDate/TimeFederwisch, LuisaGeocode
16GearGearFederwisch, Luisa
17Number of sequencesSequence no#Federwisch, Luisaempty cells = n/a
18Number of amplicon sequence variantsASV no#Federwisch, Luisaempty cells = n/a
19IdentificationIDFederwisch, LuisaNCBI ID
20Accession number, geneticsAccess no genFederwisch, LuisaNCBI Accession no.
21CommentCommentFederwisch, LuisaIncluded in Busch et al. 2022, doi:10.1038/s41467-022-32684-4
22CommentCommentFederwisch, Luisacorresponding trawl station
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
100 data points

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