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Data Publisher for Earth & Environmental Science

Federwisch, Luisa; Janussen, Dorte; Linse, Katrin; Hentschel, Ute; Busch, Kathrin (2024): Metadata and NCBI accession numbers of Antarctic deep-water sponges collected for microbiome study during expeditions PS96 and JR17003a in the Weddell Sea [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.965867, In: Federwisch, Luisa; Leys, Sally P; Janussen, Dorte; Linse, Katrin; Hentschel, Ute; Busch, Kathrin (2024): Images and microbiome data of Antarctic deep-water sponges (Demospongiae and Hexactinellida) collected during expeditions PS96 and JR17003a in the Weddell Sea, Antarctica [dataset bundled publication]. PANGAEA, https://doi.org/10.1594/PANGAEA.965868

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Abstract:
This dataset provides metadata of Antarctic deep-water sponges (Demospongiae and Hexactinellida) and sediment collected for microbiome analysis during expeditions PS96 (RV Polarstern, 2015/16) and JR17003a (RRS James Clark Ross, 2018) in the Weddell Sea. It includes information on sampling locations, number of bacterial sequences and amplicon sequence variants (ASVs), NCBI accession numbers for raw sequencing data, and SMF collection numbers for the sponges archived in the collection of Senckenberg Museum, Frankfurt am Main, Germany.
Keyword(s):
Antarctic; Demospongiae; Hexactinellida; JR17003a; microbiome; PS96; Sponges; Weddell Sea
Project(s):
Coverage:
Median Latitude: -66.611550 * Median Longitude: -50.052459 * South-bound Latitude: -74.976670 * West-bound Longitude: -58.477560 * North-bound Latitude: -63.615860 * East-bound Longitude: -26.135000
Date/Time Start: 2015-12-31T10:58:00 * Date/Time End: 2018-03-07T17:54:00
Minimum DEPTH, water: 291 m * Maximum DEPTH, water: 845 m
Event(s):
JR17003A_38 * Latitude Start: -64.053780 * Longitude Start: -58.476010 * Latitude End: -64.057780 * Longitude End: -58.477560 * Date/Time: 2018-03-05T14:18:00 * Elevation Start: -787.0 m * Elevation End: -740.0 m * Location: Prince Gustav Channel * Campaign: JR17003A * Basis: James Clark Ross * Method/Device: Agassiz Trawl (AGT)
JR17003A_46 * Latitude Start: -63.806030 * Longitude Start: -58.065230 * Latitude End: -63.810580 * Longitude End: -58.070640 * Date/Time: 2018-03-06T17:48:00 * Elevation Start: -845.0 m * Elevation End: -825.0 m * Location: Prince Gustav Channel * Campaign: JR17003A * Basis: James Clark Ross * Method/Device: Agassiz Trawl (AGT)
JR17003A_52 * Latitude Start: -63.615860 * Longitude Start: -57.501430 * Latitude End: -63.616700 * Longitude End: -57.508470 * Date/Time: 2018-03-07T17:54:00 * Elevation Start: -489.0 m * Elevation End: -429.0 m * Location: Prince Gustav Channel * Campaign: JR17003A * Basis: James Clark Ross * Method/Device: Agassiz Trawl (AGT)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventFederwisch, Luisa
2Sample IDSample IDFederwisch, Luisa
3Sample typeSamp typeFederwisch, Luisa
4SpeciesSpeciesFederwisch, Luisa
5ClassClassFederwisch, Luisa
6OrderOrderFederwisch, Luisa
7FamilyFamilyFederwisch, Luisa
8Species, unique identification (URI)Species UID (URI)Federwisch, LuisaAphia ID
9IdentificationIDFederwisch, LuisaSMF collection no.
10Cruise/expeditionExpeditionFederwisch, Luisa
11LATITUDELatitudeFederwisch, LuisaGeocode – onground
12LONGITUDELongitudeFederwisch, LuisaGeocode – onground
13DEPTH, waterDepth watermFederwisch, LuisaGeocode – onground
14LATITUDELatitudeFederwisch, LuisaGeocode – offground
15LONGITUDELongitudeFederwisch, LuisaGeocode – offground
16DEPTH, waterDepth watermFederwisch, LuisaGeocode – offground
17SiteSiteFederwisch, Luisa
18Ocean and sea regionOS regionFederwisch, Luisa
19DATE/TIMEDate/TimeFederwisch, LuisaGeocode – trawl start
20GearGearFederwisch, Luisa
21Number of sequencesSequence no#Federwisch, Luisaempty cells = n/a
22Number of amplicon sequence variantsASV no#Federwisch, Luisaempty cells = n/a
23Sample commentSample commentFederwisch, Luisa
24IdentificationIDFederwisch, LuisaNCBI ID
25Accession number, geneticsAccess no genFederwisch, LuisaNCBI Accession no.
26CommentCommentFederwisch, LuisaIncluded in Busch et al. 2022, doi:10.1038/s41467-022-32684-4
27CommentCommentFederwisch, LuisaStation for seafloor images
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
552 data points

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