O'Brien Phoebe Alexandra Joy phoebe.obrien@gu.se 0009-0008-7263-0024 University of Gothenburg GU https://ror.org/01tm6cn81 Barrenechea Angeles Ines ines.a.angeles@uit.no 0000-0002-8051-4110 The Arctic University of Norway UiT https://en.uit.no/ https://ror.org/00wge5k78 Cermakova Kristina kristina.cermakova@id-gene.com ID-GENE ecodiagnostics https://id-gene.com/ Jarrossay Renaud renaud.jarrossay@etud.univ-angers.fr Université d'Angers https://www.univ-angers.fr https://ror.org/04yrqp957 Polovodova Asteman Irina irina.polovodova@marine.gu.se 0000-0001-7300-5548 University of Gothenburg GU https://ror.org/01tm6cn81 2025 Unmodified foraminiferal raw eDNA data in form of 'reads' with ASV, OTU and taxonomic assignations from sediment surface samples at stations REF, IF20-12, IF20-10, IF20-18, IF20-01 and IF20-04 dataset https://doi.org/10.1594/PANGAEA.965589 2025-02-13T09:47:20 https://doi.org/10.1594/PANGAEA.965583 The eDNA analysis was done using a DNeasy® PowerLyzer PowerSoil Kit (QIAGEN), processed using the DADA2 pipeline and the taxonomic assignations were estimated using a sequence bank at ID-Gene ecodiagnostics lab in Geneva Switzerland. O'Brien Phoebe Alexandra Joy phoebe.obrien@gu.se 0009-0008-7263-0024 Barrenechea Angeles Ines ines.a.angeles@uit.no 0000-0002-8051-4110 Cermakova Kristina kristina.cermakova@id-gene.com Pawlowski Jan jan.pawlowski@zoo.unige.ch 0000-0003-2421-388X Alve Elisabeth ealve@geologi.uio.no 0000-0001-6692-7800 Nordberg Kjell 0000-0003-0085-4607 Polovodova Asteman Irina irina.polovodova@marine.gu.se 0000-0001-7300-5548 2024 Assessing Environmental Quality in a Historically Polluted Fjord: A Comparison of Benthic Foraminiferal eDNA and Morphospecies Approaches journal article Journal of Geophysical Research: Biogeosciences 129(12) https://doi.org/10.1029/2023JG007781 e2023JG007781 11.2121667 11.4061667 59.051 59.113666 11.317666683333332 59.090777650000014 2020-11-10T00:00:00 2020-11-11T00:00:00 -69.0 -26.0 vertical profile IF20-01D 59.09 11.3766667 Idefjorden, Sweden -38.0 2020-11-10T00:00:00 Gemini Corer metagenome, marine sediment IF20-01E 59.09 11.3766667 Idefjorden, Sweden -38.0 2020-11-10T00:00:00 Gemini Corer Foraminifera count; metagenome, marine sediment (replicate 2) IF20-01F 59.09 11.3766667 Idefjorden, Sweden -38.0 2020-11-10T00:00:00 Gemini Corer Foraminifera count; metagenome, marine sediment (replicate 3) IF20-04C 59.051 11.4061667 Idefjorden, Sweden -35.0 2020-11-11T00:00:00 Gemini Corer Foraminifera count; metagenome, marine sediment (replicate 1) IF20-04D 59.051 11.4061667 Idefjorden, Sweden -35.0 2020-11-11T00:00:00 Gemini Corer metagenome, marine sediment (replicate 2) IF20-04F 59.051 11.4061667 Idefjorden, Sweden -35.0 2020-11-11T00:00:00 Gemini Corer metagenome, marine sediment (replicate 3) IF20-10A 59.1078333 11.3101667 Idefjorden, Sweden -41.0 2020-11-11T00:00:00 Gemini Corer Foraminifera count; metagenome, marine sediment (replicate 1) IF20-10B 59.1078333 11.3101667 Idefjorden, Sweden -41.0 2020-11-11T00:00:00 Gemini Corer Foraminifera count; metagenome, marine sediment (replicate 2) IF20-10D 59.1078333 11.3101667 Idefjorden, Sweden -41.0 2020-11-11T00:00:00 Gemini Corer Foraminifera count; metagenome, marine sediment (replicate 3) IF20-12A 59.0963333 11.2598333 Idefjorden, Sweden -26.0 2020-11-10T00:00:00 Gemini Corer Foraminifera count; metagenome, marine sediment (replicate 1) IF20-12B 59.0963333 11.2598333 Idefjorden, Sweden -26.0 2020-11-10T00:00:00 Gemini Corer Foraminifera count; metagenome, marine sediment (replicate 2) IF20-12C 59.0963333 11.2598333 Idefjorden, Sweden -26.0 2020-11-10T00:00:00 Gemini Corer Foraminifera count; metagenome, marine sediment (replicate 3) IF20-18A 59.113666 11.341 Idefjorden, Sweden -35.0 2020-11-10T00:00:00 Gemini Corer Foraminifera count; metagenome, marine sediment (replicate 1) IF20-18C 59.113666 11.341 Idefjorden, Sweden -35.0 2020-11-10T00:00:00 Gemini Corer Foraminifera count; metagenome, marine sediment (replicate 2) IF20-18D 59.113666 11.341 Idefjorden, Sweden -35.0 2020-11-10T00:00:00 Gemini Corer Foraminifera count; metagenome, marine sediment (replicate 3) REF-B 59.0858333 11.2121667 Idefjorden, Sweden -69.0 2020-11-10T00:00:00 Gemini Corer metagenome, marine sediment (replicate 1) REF-D 59.0858333 11.2121667 Idefjorden, Sweden -69.0 2020-11-10T00:00:00 Gemini Corer Foraminifera count; metagenome, marine sediment (replicate 2) REF-E 59.0858333 11.2121667 Idefjorden, Sweden -69.0 2020-11-10T00:00:00 Gemini Corer Foraminifera count; metagenome, marine sediment (replicate 3) 2 CC-BY-4.0 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/ Text file TEXT O'Brien Phoebe Alexandra Joy phoebe.obrien@gu.se 0009-0008-7263-0024 TEXT Text file (Media Type) TEXT (Type) O'Brien Phoebe Alexandra Joy phoebe.obrien@gu.se 0009-0008-7263-0024 TEXT (Type) Text file (File Size) TEXT (Size) Bytes O'Brien Phoebe Alexandra Joy phoebe.obrien@gu.se 0009-0008-7263-0024 TEXT (Size) [Bytes] File content Content Metabarcoding O'Brien Phoebe Alexandra Joy phoebe.obrien@gu.se 0009-0008-7263-0024 Content CurationLevelC Enhanced curation https://wiki.pangaea.de/wiki/Curation_levels citable eDNA metabarcoding Foraminiferal assemblages heavy metals Pollutants GFBio NFDI4BioDiversity author104331 author104417 author104418 author10800 author21914 author24686 author31869 author78173 curlevel30 event3119969 event3119970 event3119971 event3119975 event3119976 event3119977 event3119980 event3119981 event3119982 event3119985 event3119986 event3119987 event3119991 event3119992 event3119993 event3119997 event3119998 event3119999 geocode1599 geocode1600 geocode1601 geocode8128 inst20492 inst20561 inst21428 inst21429 journal8820 license21 method13071 method16468 param512818 param99583 pi104331 ref124496 term233 term50386 term53372 term54505 term54814 term69206 term73733 topotype3