Citation:

PANGAEA.964767

Name: Seawater carbonate chemistry and within- and transgenerational stress legacy effects of ocean acidification on red abalone (Haliotis rufescens) growth and survival
Published: 2024-01-15
License: https://creativecommons.org/licenses/by/4.0/
Keywords: Animalia; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Growth/Morphology; Haliotis rufescens; Laboratory experiment; Laboratory strains; Mollusca; Mortality/Survival; Not applicable; Pelagos; Reproduction; Single species; Zooplankton

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Abstract:

We assessed longer-term ocean acidification (OA) effects in red abalone (Haliotis rufescens) using a multi-generational split-brood experiment. We spawned adults raised in ambient conditions to create offspring that we then exposed to high pCO2 (1,180 μatm; simulating OA) or low pCO2 (450 μatm; control or ambient conditions) during the first three months of life. We then allowed these animals to reach maturity in ambient common garden conditions for four years before returning the adults into high or low pCO2 treatments for 11 months and measuring growth and reproductive potential.

Keyword(s):

Animalia; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Growth/Morphology; Haliotis rufescens; Laboratory experiment; Laboratory strains; Mollusca; Mortality/Survival; Not applicable; Pelagos; Reproduction; Single species; Zooplankton

Supplement to:

Neylan, Isabelle P; Swezey, Daniel S; Boles, Sara E; Gross, Jackson A; Sih, Andrew; Stachowicz, John J (2024): Within‐ and transgenerational stress legacy effects of ocean acidification on red abalone ( Haliotis rufescens ) growth and survival. Global Change Biology, 30(1), e17048, https://doi.org/10.1111/gcb.17048

Source:

Neylan, Isabelle P; Swezey, Daniel S; Boles, Sara E; Gross, Jackson A; Sih, Andrew; Stachowicz, John J (2023): Within- and transgenerational stress legacy effects of ocean acidification on red abalone (Haliotis rufescens) growth and survival [dataset]. Dryad, https://doi.org/10.5061/DRYAD.M0CFXPP99

Documentation:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2022): seacarb: seawater carbonate chemistry with R. R package version 3.3.1. https://cran.r-project.org/web/packages/seacarb/index.html

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Comment:

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-01-15.

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Comment
1	Type of study	Study type		Neylan, Isabelle P
2	Species, unique identification	Species UID		Neylan, Isabelle P
3	Species, unique identification (URI)	Species UID (URI)		Neylan, Isabelle P
4	Species, unique identification (Semantic URI)	Species UID (Semantic URI)		Neylan, Isabelle P
5	Generation	Generation		Neylan, Isabelle P
6	Family	Family		Neylan, Isabelle P
7	Treatment	Treat		Neylan, Isabelle P	F1 Juvenile
8	Treatment	Treat		Neylan, Isabelle P	F1 Adult
9	Code	Code		Neylan, Isabelle P
10	Code	Code		Neylan, Isabelle P	Juv_Adult
11	Identification	ID		Neylan, Isabelle P	Tag
12	Identification	ID		Neylan, Isabelle P	Bucket_2019_2021
13	Identification	ID		Neylan, Isabelle P
14	Length	l	mm	Neylan, Isabelle P	measured in November 2019
15	Mass	Mass	g	Neylan, Isabelle P	measured in November 2019
16	Comment	Comment		Neylan, Isabelle P
17	Length	l	mm	Neylan, Isabelle P	measured in October 2020
18	Mass	Mass	g	Neylan, Isabelle P	measured in October 2020
19	Comment	Comment		Neylan, Isabelle P
20	Length	l	mm	Neylan, Isabelle P	measured in April 2021
21	Mass	Mass	g	Neylan, Isabelle P	measured in April 2021
22	Comment	Comment		Neylan, Isabelle P
23	Length	l	mm	Neylan, Isabelle P	Change between November 2019 and October 2020
24	Mass	Mass	g	Neylan, Isabelle P	Change between November 2019 and October 2020
25	Length	l	mm	Neylan, Isabelle P	Change between October 2020 and April 2021
26	Mass	Mass	g	Neylan, Isabelle P	Change between October 2020 and April 2021
27	Length	l	mm	Neylan, Isabelle P	Change between November 2019 and April 2021
28	Mass	Mass	g	Neylan, Isabelle P	Change between November 2019 and April 2021
29	Ratio	Ratio		Neylan, Isabelle P	Weight to Length as measured in October 2020
30	Ratio	Ratio		Neylan, Isabelle P	Weight to Length as measured in November 2019
31	Ratio	Ratio		Neylan, Isabelle P	Change in Weight/Length Ratio from 2019 to 2020
32	Category	Cat		Neylan, Isabelle P	whether the abalone successfully spawned (produced sperm or eggs) during the spawning event in April of 2021 (responses are binary 0 or 1)
33	Sex	Sex		Neylan, Isabelle P
34	Score	Score		Neylan, Isabelle P	given to abalone during ultrasound that captures the thickness/ripeness of the gonadal tissue (see Boles et al. 2022 for full details)
35	Thickness	Thick	cm	Neylan, Isabelle P	gonadal tissue. Ultrasound images captured in January of 2021
36	Thickness	Thick	cm	Neylan, Isabelle P	gonadal tissue. Ultrasound images captured on the day of spawning, prior to spawning, in April of 2021.
37	Length	l	mm	Neylan, Isabelle P	measured in April 2021
38	Thickness	Thick	cm	Neylan, Isabelle P	divided by the length of the animal
39	Treatment	Treat		Neylan, Isabelle P	F2 offspring abalone
40	Individuals	Ind	#	Neylan, Isabelle P	at 10 days post fertilization
41	Individuals	Ind	#	Neylan, Isabelle P	at 28 days post fertilization
42	Individuals	Ind	#	Neylan, Isabelle P	at 97 days post fertilization
43	Proportion of survival	Survival		Neylan, Isabelle P	from day 10 to day 28 post fertilization
44	Proportion of survival	Survival		Neylan, Isabelle P	from day 28 to day 97 post fertilization
45	Proportion of survival	Survival		Neylan, Isabelle P	from day 10 to day 97 post fertilization
46	Survival	Surv	#	Neylan, Isabelle P	from day 10 to day 28 post fertilization
47	Survival	Surv	#	Neylan, Isabelle P	from day 10 to day 97 post fertilization
48	Survival	Surv	#	Neylan, Isabelle P	from day 28 to day 97 post fertilization
49	Number	No		Neylan, Isabelle P	Weigh_boat
50	Identification	ID		Neylan, Isabelle P
51	Individuals	Ind	#	Neylan, Isabelle P	left in each cup after the three month experiment that were used in these measurements
52	Mass	Mass	µg	Neylan, Isabelle P	boat
53	Mass	Mass	µg	Neylan, Isabelle P	dried abalone + foil boat
54	Mass	Mass	µg	Neylan, Isabelle P	ashed + foil boat
55	Mass	Mass	µg	Neylan, Isabelle P	dried abalone
56	Mass	Mass	µg	Neylan, Isabelle P	shell or inorganic mass of the abalone
57	Mass	Mass	µg	Neylan, Isabelle P	tissue or organic mass of the abalone
58	Area	Area	mm²	Neylan, Isabelle P	total shell
59	Area	Area	mm²	Neylan, Isabelle P	average shell
60	Ratio	Ratio		Neylan, Isabelle P	weight of the ashed abalone divided by the total area of shell
61	Ratio	Ratio		Neylan, Isabelle P	weight of the dried organic mass or tissue divided by the total area of shell
62	Ratio	Ratio		Neylan, Isabelle P	shell mass to tissue mass
63	Ratio	Ratio		Neylan, Isabelle P	weight of the whole animal dried divided by the total area of shell
64	Comment	Comment		Neylan, Isabelle P
65	Area	Area	mm²	Neylan, Isabelle P	at 10 DPF
66	Area	Area	mm²	Neylan, Isabelle P	average at 97 DPF
67	Individuals	Ind	#	Neylan, Isabelle P	at 97 DPF
68	Individuals	Ind	#	Neylan, Isabelle P	at 28 DPF
69	Comment	Comment		Neylan, Isabelle P
70	Temperature, water	Temp	°C	Neylan, Isabelle P	F1 Adult Exposure
71	Temperature, water, standard deviation	Temp std dev	±	Neylan, Isabelle P	F1 Adult Exposure
72	Alkalinity, total	AT	µmol/kg	Neylan, Isabelle P	F1 Adult Exposure
73	Alkalinity, total, standard deviation	AT std dev	±	Neylan, Isabelle P	F1 Adult Exposure
74	pH	pH		Neylan, Isabelle P	F1 Adult Exposure
75	pH, standard deviation	pH std dev	±	Neylan, Isabelle P	F1 Adult Exposure
76	Salinity	Sal		Neylan, Isabelle P	F1 Adult Exposure
77	Salinity, standard deviation	Sal std dev	±	Neylan, Isabelle P	F1 Adult Exposure
78	Temperature, water	Temp	°C	Neylan, Isabelle P	F2 Larval Phase
79	Temperature, water, standard deviation	Temp std dev	±	Neylan, Isabelle P	F2 Larval Phase
80	Alkalinity, total	AT	µmol/kg	Neylan, Isabelle P	F2 Larval Phase
81	Alkalinity, total, standard deviation	AT std dev	±	Neylan, Isabelle P	F2 Larval Phase
82	pH	pH		Neylan, Isabelle P	F2 Larval Phase
83	pH, standard deviation	pH std dev	±	Neylan, Isabelle P	F2 Larval Phase
84	Salinity	Sal		Neylan, Isabelle P	F2 Larval Phase
85	Salinity, standard deviation	Sal std dev	±	Neylan, Isabelle P	F2 Larval Phase
86	Temperature, water	Temp	°C	Neylan, Isabelle P	F2 Post-settlement
87	Temperature, water, standard deviation	Temp std dev	±	Neylan, Isabelle P	F2 Post-settlement
88	Alkalinity, total	AT	µmol/kg	Neylan, Isabelle P	F2 Post-settlement
89	Alkalinity, total, standard deviation	AT std dev	±	Neylan, Isabelle P	F2 Post-settlement
90	pH	pH		Neylan, Isabelle P	F2 Post-settlement
91	pH, standard deviation	pH std dev	±	Neylan, Isabelle P	F2 Post-settlement
92	Salinity	Sal		Neylan, Isabelle P	F2 Post-settlement
93	Salinity, standard deviation	Sal std dev	±	Neylan, Isabelle P	F2 Post-settlement
94	Carbonate system computation flag	CSC flag		Yang, Yan
95	Carbon dioxide	CO2	µmol/kg	Yang, Yan	F1 Adult Exposure
96	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	F1 Adult Exposure
97	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	F1 Adult Exposure
98	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	F1 Adult Exposure
99	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	F1 Adult Exposure
100	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	F1 Adult Exposure
101	Aragonite saturation state	Omega Arg		Yang, Yan	F1 Adult Exposure
102	Calcite saturation state	Omega Cal		Yang, Yan	F1 Adult Exposure
103	Carbon dioxide	CO2	µmol/kg	Yang, Yan	F2 Larval Phase
104	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	F2 Larval Phase
105	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	F2 Larval Phase
106	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	F2 Larval Phase
107	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	F2 Larval Phase
108	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	F2 Larval Phase
109	Aragonite saturation state	Omega Arg		Yang, Yan	F2 Larval Phase
110	Calcite saturation state	Omega Cal		Yang, Yan	F2 Larval Phase
111	Carbon dioxide	CO2	µmol/kg	Yang, Yan	F1 Adult Exposure
112	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	F1 Adult Exposure
113	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	F1 Adult Exposure
114	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	F1 Adult Exposure
115	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	F1 Adult Exposure
116	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	F1 Adult Exposure
117	Aragonite saturation state	Omega Arg		Yang, Yan	F1 Adult Exposure
118	Calcite saturation state	Omega Cal		Yang, Yan	F1 Adult Exposure

License:

Creative Commons Attribution 4.0 International (CC-BY-4.0)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

40659 data points

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