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Harney, Ewan; Rastrick, S P S; Artigaud, Sebastien; Pisapia, Julia; Bernay, Benoit; Miner, Philippe; Pichereau, Vianney; Strand, Øivind; Boudry, Pierre; Charrier, Gregory (2023): Seawater carbonate chemistry and post-larval growth and metabolism in two populations of the great scallop (Pecten maximus L.) [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.964022

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Abstract:
We carried out a common garden experiment to investigate how different populations of the economically important great scallop (Pecten maximus) from France and Norway responded to variation in temperature and pCO2 concentration. After acclimation, post-larval scallops (spat) were reared for 31 days at one of two temperatures (13°C and 19°C) under either ambient or elevated pCO2 (pH 8.0 and pH 7.7). We combined measures of proteomic, metabolic, and phenotypic traits to produce an integrative picture of how physiological plasticity varies between the populations.
Keyword(s):
Animalia; Benthic animals; Benthos; Containers and aquaria (20-1000 L or < 1 m**2); Gene expression (incl. proteomics); Growth/Morphology; Laboratory experiment; Laboratory strains; Mollusca; Mortality/Survival; Not applicable; Pecten maximus; Respiration; Single species; Temperature
Supplement to:
Harney, Ewan; Rastrick, S P S; Artigaud, Sebastien; Pisapia, Julia; Bernay, Benoit; Miner, Philippe; Pichereau, Vianney; Strand, Øivind; Boudry, Pierre; Charrier, Gregory (2023): Impacts of ocean acidification and warming on post-larval growth and metabolism in two populations of the great scallop ( Pecten maximus ). Journal of Experimental Biology, 226(11), jeb245383, https://doi.org/10.1242/jeb.245383
Source:
Harney, Ewan (2022): scallop_oaw. https://github.com/ewan-harney/scallop_oaw
Documentation:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2022): seacarb: seawater carbonate chemistry with R. R package version 3.3.1. https://cran.r-project.org/web/packages/seacarb/index.html
Project(s):
Ocean Acidification International Coordination Centre (OA-ICC)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-12-05.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Type of studyStudy typeHarney, Ewan
2Species, unique identificationSpecies UIDHarney, Ewan
3Species, unique identification (URI)Species UID (URI)Harney, Ewan
4Species, unique identification (Semantic URI)Species UID (Semantic URI)Harney, Ewan
5IdentificationIDHarney, Ewantank
6IdentificationIDHarney, Ewantray
7GroupGroupHarney, EwanPopulation
8Treatment: temperatureT:temp°CHarney, Ewan
9TreatmentTreatHarney, EwanpH
10TreatmentTreatHarney, Ewan
11IdentificationIDHarney, Ewan
12HeighthmmHarney, Ewanday 0
13HeighthmmHarney, Ewanday 37
14Shell, dry massSDMgHarney, Ewanday 37
15Body mass, dryBM drymgHarney, Ewan
16Condition indexCIHarney, Ewan
17Individual codeIndividual codeHarney, Ewan
18Respiration rate, oxygenResp O2µmol/mg/hHarney, Ewan
19SalinitySalHarney, Ewan
20Temperature, waterTemp°CHarney, Ewan
21Temperature, water, standard deviationTemp std dev±Harney, Ewan
22pHpHHarney, EwanNBS scale
23pH, standard deviationpH std dev±Harney, EwanNBS scale
24Bicarbonate ion[HCO3]-µmol/kgHarney, Ewan
25Bicarbonate ion, standard deviation[HCO3]- std dev±Harney, Ewan
26Carbon, inorganic, dissolvedDICµmol/kgHarney, Ewan
27Carbon, inorganic, dissolved, standard deviationDIC std dev±Harney, Ewan
28Alkalinity, totalATµmol/kgHarney, Ewan
29Alkalinity, total, standard deviationAT std dev±Harney, Ewan
30Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmHarney, Ewan
31Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Harney, Ewan
32Calcite saturation stateOmega CalHarney, Ewan
33Calcite saturation state, standard deviationOmega Cal std dev±Harney, Ewan
34Aragonite saturation stateOmega ArgHarney, Ewan
35Aragonite saturation state, standard deviationOmega Arg std dev±Harney, Ewan
36Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
38Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
43Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
44Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
19507 data points

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