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Papadimitraki, Maria; Jónasdóttir, Sigrún Huld (2023): Global compilation of stable carbon (δ13C) and nitrogen (δ15N) isotope values of meso- and bathypelagic fish [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.962977

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Published: 2023-11-08DOI registered: 2023-12-08

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Abstract:
Stable isotope analysis (SIA) has emerged as a valuable tool for understanding the trophic structure of the marine food web and gaining insights into trophic levels and niche. Researchers are increasingly utilizing SIA in studies focused on feeding ecology, particularly in estimating the long-term diets of meso- and bathypelagic fish. To facilitate this research, a global database of published data on stable isotopes, specifically δ13C and δ15N, of meso- and bathypelagic fish was created. The database was constructed by conducting a thorough search on Google Scholar and reviewing the references cited in the retrieved papers. The search primarily involved using popular terms such as stable isotope analysis or feeding ecology in combination with mesopelagic or bathypelagic fish. The resulting SIA database contains δ13C and δ15N values for 95 different species of meso- and bathypelagic fish, belonging to 27 families, with specimens collected between 2004 and 2015. Each entry in the database includes information on the sampling location, month and year of sample collection, taxonomic classifications (phylum, class, order, family), number of samples analyzed, as well as the reference and DOI of the original data source. This global SIA database holds significant potential as a valuable tool and data source for conducting large-scale meta-analyses.
Keyword(s):
bathypelagic fish; Food web; mesopelagic fish; stable isotope analysis; trophic level
Supplement to:
Papadimitraki, Maria; Maar, Kristian; Jónasdóttir, Sigrún Huld (2023): Meso- and bathypelagic fish feeding ecology: A meta-analysis on fatty acids and stable isotope trophic studies. Deep Sea Research Part I: Oceanographic Research Papers, 198, 104083, https://doi.org/10.1016/j.dsr.2023.104083
Source:
Cherel, Yves; Fontaine, Camille; Richard, Pierre; Labatc, Jean-Philippe (2010): Isotopic niches and trophic levels of myctophid fishes and their predators in the Southern Ocean. Limnology and Oceanography, 55(1), 324-332, https://doi.org/10.4319/lo.2010.55.1.0324
Colaço, Ana; Giacomello, Eva; Porteiro, Filipe; Menezes, Gui M (2013): Trophodynamic studies on the Condor seamount (Azores, Portugal, North Atlantic). Deep Sea Research Part II: Topical Studies in Oceanography, 98, 178-189, https://doi.org/10.1016/j.dsr2.2013.01.010
Fanelli, Emanuela; Cartes, Joan E; Papiol, V (2011): Food web structure of deep-sea macrozooplankton and micronekton off the Catalan slope: Insight from stable isotopes. Journal of Marine Systems, 87(1), 79-89, https://doi.org/10.1016/j.jmarsys.2011.03.003
Fanelli, Emanuela; Papiol, V; Cartes, Joan E; Rodriguez-Romeu, O (2014): Trophic ecology of Lampanyctus crocodilus on north-west Mediterranean Sea slopes in relation to reproductive cycle and environmental variables. Journal of Fish Biology, 84(6), 1654-1688, https://doi.org/10.1111/jfb.12378
McClain-Counts, Jennifer; Demopoulos, Amanda W J; Ross, Steve W (2017): Trophic structure of mesopelagic fishes in the Gulf of Mexico revealed by gut content and stable isotope analyses. Marine Ecology, 38(4), e12449, https://doi.org/10.1111/maec.12449
Olivar, M Pilar; Bode, Antonio; López-Pérez, Cristina; Hulley, P Alexander; Hernández-León, Santiago (2019): Trophic position of lanternfishes (Pisces: Myctophidae) of the tropical and equatorial Atlantic estimated using stable isotopes. ICES Journal of Marine Science, 76(3), 649-661, https://doi.org/10.1093/icesjms/fsx243
Petursdottir, Hildur; Gislason, Astthor; Falk-Petersen, Stig; Hop, Haakon; Svavarsson, Jörundur (2008): Trophic interactions of the pelagic ecosystem over the Reykjanes Ridge as evaluated by fatty acid and stable isotope analyses. Deep Sea Research Part II: Topical Studies in Oceanography, 55(1-2), 83-93, https://doi.org/10.1016/j.dsr2.2007.09.003
Richards, Travis M; Gipson, Emily E; Cook, April; Sutton, Tracey T; Wells, R J D (2019): Trophic ecology of meso- and bathypelagic predatory fishes in the Gulf of Mexico. ICES Journal of Marine Science, 76(3), 662-672, https://doi.org/10.1093/icesjms/fsy074
Silva, Mónica A; Olivar, M Pilar; Bernal, Ainhoa; Colaço, Ana; Chouvelon, Tiphaine; Spitz, Jérôme; Fonseca, Catarina T; Pérez-Jorge, Sergi (2022): Compilation of stable nitrogen and carbon isotope ratios of marine biota from the central and Northeast Atlantic, and the Mediterranean Sea [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.945917
Stowasser, Gabriele; Atkinson, Angus; McGill, Rona A R; Phillips, Richard A; Collins, Martin A; Pond, David W (2012): Food web dynamics in the Scotia Sea in summer: A stable isotope study. Deep Sea Research Part II: Topical Studies in Oceanography, 59-60, 208-221, https://doi.org/10.1016/j.dsr2.2011.08.004
Valls, Maria; Olivar, M Pilar; Fernández de Puelles, Maria Luz; Molí, Balbina; Bernal, Ainhoa; Sweeting, C J (2014): Trophic structure of mesopelagic fishes in the western Mediterranean based on stable isotopes of carbon and nitrogen. Journal of Marine Systems, 138, 160-170, https://doi.org/10.1016/j.jmarsys.2014.04.007
Wang, Fuqiang; Wu, Ying; Chen, Zuozhi; Zhang, Guosen; Zhang, Jun; Zheng, Shan; Kattner, Gerhard (2019): Trophic Interactions of Mesopelagic Fishes in the South China Sea Illustrated by Stable Isotopes and Fatty Acids. Frontiers in Marine Science, 5, 522, https://doi.org/10.3389/fmars.2018.00522
Funding:
Horizon 2020 (H2020), grant/award no. 817806: Sustainable management of mesopelagic resources
Coverage:
Median Latitude: 18.120134 * Median Longitude: -27.765179 * South-bound Latitude: -55.000000 * West-bound Longitude: -91.600000 * North-bound Latitude: 59.970000 * East-bound Longitude: 115.000000
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Record numberRNPapadimitraki, Maria
2Ocean and sea regionOS regionPapadimitraki, Maria
3LocationLocationPapadimitraki, Maria
4LATITUDELatitudePapadimitraki, MariaGeocode
5LONGITUDELongitudePapadimitraki, MariaGeocode
6MonthMonthPapadimitraki, Mariastart
7MonthMonthPapadimitraki, Mariaend
8Year of observationYear obsa ADPapadimitraki, Mariastart
9Year of observationYear obsa ADPapadimitraki, Mariaend
10OrganismsOrgPapadimitraki, Mariatype
11PhylumPhylumPapadimitraki, Maria
12ClassClassPapadimitraki, Maria
13OrderOrderPapadimitraki, Maria
14FamilyFamilyPapadimitraki, Maria
15Taxon/taxaTaxaPapadimitraki, Maria
16Taxon/taxa, unique identificationTaxa UIDPapadimitraki, Maria
17Taxon/taxa, unique identification (URI)Taxa UID (URI)Papadimitraki, Maria
18Taxon/taxa, unique identification (Semantic URI)Taxa UID (Semantic URI)Papadimitraki, Maria
19Number of individualsInd No#Papadimitraki, Maria
20Actinopteri, total lengthActinopteri TLcmPapadimitraki, MariaMean values
21Actinopteri, standard lengthActinopteri SLcmPapadimitraki, Mariaminimum
22Actinopteri, standard lengthActinopteri SLcmPapadimitraki, Mariamaximum
23Actinopteri, standard lengthActinopteri SLcmPapadimitraki, MariaMean values
24Actinopteri, standard length, standard deviationActinopteri SL std dev±Papadimitraki, Maria
25δ13Cδ13C‰ PDBPapadimitraki, Maria
26δ13C, standard deviationδ13C std dev±Papadimitraki, Maria
27δ15Nδ15N‰ airPapadimitraki, Maria
28δ15N, standard deviationδ15N std dev±Papadimitraki, Maria
29Carbon/Nitrogen ratioC/NPapadimitraki, Maria
30Carbon/Nitrogen ratio, standard deviationC/N std dev±Papadimitraki, Maria
31Trophic levelTrophic levelPapadimitraki, Maria
32Trophic level, standard deviationTrophic level std dev±Papadimitraki, Maria
33CommentCommentPapadimitraki, Maria
34Persistent IdentifierPersistent IdentifierPapadimitraki, Mariadata
35Reference/sourceReferencePapadimitraki, Maria
36Persistent IdentifierPersistent IdentifierPapadimitraki, Marialiterature
37InstitutionInstitutionPapadimitraki, Maria
38InvestigatorInvestigatorPapadimitraki, Maria
Status:
Curation Level: Enhanced curation (CurationLevelC) * Processing Level: PANGAEA data processing level 4 (ProcLevel4)
Size:
5907 data points

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