de.pangaea.dataset961727 und dataset PANGAEA
info@pangaea.de
https://www.pangaea.de/ information pointOfContact 2026-05-27T18:29:18Z https://doi.pangaea.de/10.1594/PANGAEA.961727 <gco:CharacterString>Metabolomics reprogramming of the northern shrimp exposed to combined ocean change drivers</gco:CharacterString> 2023-09-18T07:41:12 publication https://doi.org/10.1594/PANGAEA.961727 Guscelli, Ella
ella.guscelli@uqar.ca
https://orcid.org/0000-0002-2151-0902 information author Chabot, Denis
chabot.denis@gmail.com
author Vermandele, Fanny
fanny.vermandele@uqar.ca
https://orcid.org/0000-0002-0239-3835 information author Madeira, Diana
dianabmar@gmail.com
https://orcid.org/0000-0002-2435-9283 information author Calosi, Piero
Piero_Calosi@uqar.ca
https://orcid.org/0000-0003-3378-2603 information author PANGAEA
info@pangaea.de
https://www.pangaea.de/ information publisher tableDigital The dataset contains information on the metabolomics reprogramming of the northern shrimp Pandalus borealis collected from four distinct geographic origins (i.e. St. Lawrence Estuary (SLE) 48° 35' N, 68° 35' W, May 2018 ; Eastern Scotian Shelf (ESS), 45° 23' N, 61° 04' W, February 2019 ; Esquiman Channel (EC), 50° 44' N, 57°29' W, July 2019 ; and Northeast Newfoundland Coast (NNC), 50° 18' N, 54° 16' W, November 2019) and exposed for 30 days under laboratory conditions to different ocean global change scenarios of temperature (2, 6, and 10 °C) and pH (7.75 and 7.40), in isolation and in combination. The dataset contains the concentration of key metabolites linked to the aerobic and anaerobic metabolism, expressed as ng metabolite per mg wet weight. Metabolite extraction, identification and quantification was carried out on shrimp muscle tissue by Les laboratoires Iso-BioKem Inc. in February/March 2021. completed Guscelli, Ella
ella.guscelli@uqar.ca
https://orcid.org/0000-0002-2151-0902 information principalInvestigator crustacean global change immunity metabolomics multipopulations Pandalus borealis stress theme <gco:CharacterString>PANGAEA Keyword List</gco:CharacterString> 1995-01-01 creation PANGAEA
info@pangaea.de
https://www.pangaea.de/ information pointOfContact 554023 Vulnerability of Northern Shrimp Populations to Climate and Global Changes Along the East Coast of Canada - From Natural Resource to Coastal Communities theme <gco:CharacterString>PANGAEA Project List</gco:CharacterString> 1995-01-01 creation PANGAEA
info@pangaea.de
https://www.pangaea.de/ information pointOfContact copyright copyright CC-BY-4.0: Creative Commons Attribution 4.0 International textTable und geoscientificInformation -68.583333 -54.266667 45.383333 50.733333 2018-05-01T00:00:00 2019-11-01T00:00:00 This project was further supported by: 1: The DFO Strategic Program for Ecosystem-Based Research and Advice 2.The Aquatic Climate Change Adaptation Services Program 3. FIR UQAR 4. MITACS-Ouranos Accelerate 5. The Canada Foundation for Innovation (CFI) 6. Réal-Decoste Ouranos scholarship (286109) Type of study thematicClassification Event label thematicClassification change following treatment LATITUDE thematicClassification change following treatment LONGITUDE thematicClassification change following treatment Origin thematicClassification DATE/TIME thematicClassification Species thematicClassification Species, unique identification (URI) thematicClassification Individual ID thematicClassification Treatment thematicClassification Treatment: temperature physicalMeasurement °C °C Treatment: pH thematicClassification Phenylalanine, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Tryptophan, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Betaine, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Isoleucine, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Tyrosine, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Valine, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg beta-aminoisobutyric acid, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg alpha-aminobutyric acid, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Hydroxyproline, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Threonine, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Glutamine, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Glycine, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Serine, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg alpha-aminoadipic acid, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Adenosine monophosphate, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Glutamate, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Flavin adenine dinucleotide, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Aspartate, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Histidine, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Nicotinamide adenine dinucleotide, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Lysine, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Cystine, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Pyruvate, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Glucose, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Nicotinamide adenine dinucleotide, reduced, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg alpha-ketoglutaric acid, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Succinate, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Fumarate, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Malate, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Adenosine diphosphate, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Adenosine triphosphate, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Glucose-6-phosphate, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Citrate, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg Phosphoenolpyruvate, per fresh mass physicalMeasurement Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment ng/mg ng/mg ATP/ADP ratio, per fresh mass thematicClassification Ultra-high-performance liquid chromatography (UHPLC), Agilent Technologies, 1260 Infinity II Prime; coupled with Triple quadrupole mass spectrometer, Agilent Technologies, 6420; change following treatment text/tab-separated-values unknown https://doi.pangaea.de/10.1594/PANGAEA.961727?format=textfile download dataset The data set was checked for completeness, correctness, and consistency of metainformation. Validity of used methods was checked and - if applicable - precision and range of data. EVENT LABEL: EC_Pandalus_2019 * LATITUDE: 50.733333 * LONGITUDE: -57.483333 * DATE/TIME: 2019-07-01T00:00:00 * LOCATION: Esquiman Channel * METHOD/DEVICE: Shrimp trawler 2019-07-01T00:00:00 EVENT LABEL: ESS_Pandalus_2019 * LATITUDE: 45.383333 * LONGITUDE: -61.066667 * DATE/TIME: 2019-02-01T00:00:00 * LOCATION: Eastern Scotian Shelf * METHOD/DEVICE: Shrimp trap 2019-02-01T00:00:00 EVENT LABEL: NNC_Pandalus_2019 * LATITUDE: 50.300000 * LONGITUDE: -54.266667 * DATE/TIME: 2019-11-01T00:00:00 * LOCATION: Northeast Newfoundland Coast * METHOD/DEVICE: Shrimp trawler 2019-11-01T00:00:00 EVENT LABEL: SLE_Pandalus_2018 * LATITUDE: 48.583333 * LONGITUDE: -68.583333 * DATE/TIME: 2018-05-01T00:00:00 * LOCATION: St. Lawrence Estuary * METHOD/DEVICE: Shrimp trawler 2018-05-01T00:00:00 References <gco:CharacterString>All roads lead to Rome: inter-origin variation in metabolomics reprogramming of the northern shrimp exposed to global changes leads to a comparable physiological status</gco:CharacterString> 2023-01-01 publication https://doi.org/10.3389/fmars.2023.1170451 Guscelli, Ella
ella.guscelli@uqar.ca
https://orcid.org/0000-0002-2151-0902 information author Chabot, Denis
chabot.denis@gmail.com
author Vermandele, Fanny
fanny.vermandele@uqar.ca
https://orcid.org/0000-0002-0239-3835 information author Madeira, Diana
dianabmar@gmail.com
https://orcid.org/0000-0002-2435-9283 information author Calosi, Piero
Piero_Calosi@uqar.ca
https://orcid.org/0000-0003-3378-2603 information author documentDigital Frontiers in Marine Science 10 1170451