Metadata and sampling record of Eurasian Jays from Hesse, Germany 2020/21
type: Dataset
conforms to: http://mlcommons.org/croissant/1.0
creator: Yvonne Schumm
creator: Naemi Lederer-Ponzer
  type: Person
  family name: Lederer-Ponzer
  given name: Naemi
  affiliation: University of Giessen
creator: Juan F Masello
creator: Petra Quillfeldt
publisher: PANGAEA
  type: Organization
  disambiguating description: Data Publisher for Earth & Environmental Science
included in data catalog: PANGAEA
  type: DataCatalog
  disambiguating description: Data Publisher for Earth & Environmental Science
date published: 2023-08-25
additional type: dataset
description: Eurasian Jays Garrulus glandarius (Corvidae, n = 16) were trapped in Caldern, Hesse, Central Germany in the years 2020 and 2021 to check for the presence of haemosporidian parasites. For this we collected metadata (e.g. collection date, sex, measurements) as well as feather, faeces and blood samples for subsequent analysis of haemosporidian parasites (Haemoproteus and Leucocytozoon). All individuals were infected with at least one haemosporidian genus. The most common infection pattern was a mixed infection with Haemoproteus and Leucocytozoon, whereas no Plasmodium infection was detected in any of the samples of the Jays.
abstract: Eurasian Jays Garrulus glandarius (Corvidae, n = 16) were trapped in Caldern, Hesse, Central Germany in the years 2020 and 2021 to check for the presence of haemosporidian parasites. For this we collected metadata (e.g. collection date, sex, measurements) as well as feather, faeces and blood samples for subsequent analysis of haemosporidian parasites (Haemoproteus and Leucocytozoon). All individuals were infected with at least one haemosporidian genus. The most common infection pattern was a mixed infection with Haemoproteus and Leucocytozoon, whereas no Plasmodium infection was detected in any of the samples of the Jays.
citation: Blood smear counts of Haemosporidian parasites in Eurasian Jays from Hesse, Germany 2020/21
citation: Blood smear images of Haemosporidian parasites in Eurasian Jays from Hesse, Germany 2020/21
citation: High prevalence of haemosporidian parasites in Eurasian jays
citation: Avian Malaria Initiative database report for Haemoproteus and Leucocytozoo parasite search
citation: Avian Malaria Initiative database search results for Haemoproteus and Leucocytozoon parasite origins.
citation: Definition of "Country" trait to build lineage network, file #1
citation: Definition of "Country" trait to build lineage network, file #2
citation: PCR protocol for Haemoproteus and Leucocytozoon DNA identification
spatial coverage: Place
  geo: GeoShape
    box: 50.836747 8.663628 50.84253 8.682997
temporal coverage: 2020-05-20T11:45:00/2021-07-21T18:40:00
funding: LOEWE priority project Nature 4.0 - Sensing Biodiversity
  type: MonetaryGrant
  funder: Hessian Ministry for Science and the Arts
size: QuantitativeValue
  value: 326.0
  unit text: data points
variable measured: Event label
variable measured: Sample code/label
variable measured: LATITUDE
variable measured: LONGITUDE
variable measured: DATE/TIME
  type: PropertyValue
  subject of: DefinedTermSet
    has defined term: Time
variable measured: Location
  type: PropertyValue
  subject of: DefinedTermSet
    has defined term: location
variable measured: Country
variable measured: Location ID
variable measured: Identification
variable measured: Method comment
  type: PropertyValue
  description: Capture method
variable measured: Life stage
variable measured: Sex
  type: PropertyValue
  subject of: DefinedTermSet
    has defined term: sex
variable measured: Wing, length
  type: PropertyValue
  unit text: mm
  subject of: DefinedTermSet
    has defined term: Length
variable measured: Wing, length, primary 8
  type: PropertyValue
  unit text: mm
  subject of: DefinedTermSet
    has defined term: Length
variable measured: Tarsus, length
  type: PropertyValue
  unit text: mm
  subject of: DefinedTermSet
    has defined term: Length
variable measured: Aves, body mass
  type: PropertyValue
  unit text: g
  subject of: DefinedTermSet
    has defined term: Aves
    has defined term: Mass
variable measured: Sampling
  type: PropertyValue
  description: of body feather
variable measured: Sampling
  type: PropertyValue
  description: of faeces
variable measured: Sampling
  type: PropertyValue
  description: using FTA sampling cards
variable measured: Sampling
  type: PropertyValue
  description: of blood smear
variable measured: Sampling
  type: PropertyValue
  description: of blood stored in ethanol
variable measured: DNA concentration
  type: PropertyValue
  unit text: ng/µl
  measurement technique: UV-Vis spectrophotometer, Thermo Scientific, NanoDrop 2000c
  subject of: DefinedTermSet
    has defined term: Density
variable measured: Absorption coefficient, 260 nm
  type: PropertyValue
  unit text: 1/m
  measurement technique: UV-Vis spectrophotometer, Thermo Scientific, NanoDrop 2000c
  subject of: DefinedTermSet
    has defined term: Absorption Coefficient
variable measured: Absorption coefficient, 280 nm
  type: PropertyValue
  unit text: 1/m
  measurement technique: UV-Vis spectrophotometer, Thermo Scientific, NanoDrop 2000c
  subject of: DefinedTermSet
    has defined term: Absorption Coefficient
variable measured: Absorption coefficient, 260 nm/280 nm, ratio
  type: PropertyValue
  measurement technique: Calculated
  subject of: DefinedTermSet
    has defined term: Absorption Coefficient
    has defined term: ratio
variable measured: Absorption coefficient, 260 nm/230 nm, ratio
  type: PropertyValue
  measurement technique: Calculated
  subject of: DefinedTermSet
    has defined term: Absorption Coefficient
    has defined term: ratio
keywords: Bird; Blood; Eurasian Jay; Parasitology
license: https://creativecommons.org/licenses/by/4.0/
conditions of access: unrestricted
is accessible for free: true
language: en
distribution: data matrix.tab
distribution: FileObject
  type: DataDownload
  encoding format: text/html

Yvonne Schumm
type: Person
family name: Schumm
given name: Yvonne
affiliation: University of Giessen

University of Giessen
type: Organization

Juan F Masello
type: Person
family name: Masello
given name: Juan F
affiliation: University of Giessen

Petra Quillfeldt
type: Person
family name: Quillfeldt
given name: Petra
affiliation: University of Giessen

Blood smear counts of Haemosporidian parasites in Eurasian Jays from Hesse, Germany 2020/21
type: CreativeWork
type: Dataset
creator: Yvonne Schumm
creator: Naemi Lederer-Ponzer
  type: Person
  family name: Lederer-Ponzer
  given name: Naemi
creator: Juan F Masello
creator: Petra Quillfeldt
date published: 2023
additional type: dataset

Blood smear images of Haemosporidian parasites in Eurasian Jays from Hesse, Germany 2020/21
type: CreativeWork
type: Dataset
creator: Yvonne Schumm
creator: Naemi Lederer-Ponzer
  type: Person
  family name: Lederer-Ponzer
  given name: Naemi
creator: Juan F Masello
creator: Petra Quillfeldt
date published: 2023
additional type: dataset

High prevalence of haemosporidian parasites in Eurasian jays
type: CreativeWork
type: ScholarlyArticle
creator: Yvonne Schumm
creator: Naemi Lederer-Ponzer
  type: Person
  family name: Lederer-Ponzer
  given name: Naemi
creator: Juan F Masello
creator: Petra Quillfeldt
date published: 2024
pagination: 182
is part of: Parasitology Research
  type: Periodical
  type: PublicationVolume
  volume number: 123(4)
additional type: journal article

Hessian Ministry for Science and the Arts
type: Organization

Time
type: DefinedTerm
alternate name: T

location
type: DefinedTerm

Length
type: DefinedTerm
alternate name: L

Aves
type: DefinedTerm

Mass
type: DefinedTerm
alternate name: M

Density
type: DefinedTerm

ratio
type: DefinedTerm

data matrix.tab
type: FileObject
type: DataDownload
encoding format: text/tab-separated-values