Jollivet, Didier; Portanier, Elodie; Tran Lu Y, Adrien; Arnaud-Haond, Sophie (2023): Genetic connectivity maps for deep sea vent and cold-seep fauna and cold-water corals from the North Atlantic [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.961199
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Abstract:
In order to better describe both ancient and contemporary migratory flows associated with the North Atlantic abyssal fauna as part of the EC H2020 iAtlantic project, this dataset provides a collection of connectivity maps for several engineer species from hydrothermal springs on the Mid-Atlantic Ridge, from mussels of cold seeps on both sides of the Atlantic and, from deep-water corals in the NE Atlantic. These maps and the associated migrant flow matrices are derived from several demogenetic model analyses (dadi, moments and divmigrate) using multi-locus genotype data derived from a sub-sampling of the genomes of these target species. For each species, the dataset includes a series of shapefiles with a pdf map, the file of the geographic coordinates of the studied localities with a flow matrix, as well as the file of the multi-locus genotypes used to carry out the genetic analysis of the populations and establish the migratory flows.
Keyword(s):
Project(s):
Funding:
Horizon 2020 (H2020), grant/award no. 818123: Integrated Assessment of Atlantic Marine Ecosystems in Space and Time
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Binary Object | Binary | Jollivet, Didier | Model (Model) | Demogenetic models applied (dadi, moments, divmigrate) | |
| 2 | Binary Object (Media Type) | Binary (Type) | Jollivet, Didier | Model (Model) | Demogenetic models applied (dadi, moments, divmigrate) | |
| 3 | Binary Object (File Size) | Binary (Size) | Bytes | Jollivet, Didier | Model (Model) | Demogenetic models applied (dadi, moments, divmigrate) |
| 4 | File content | Content | Jollivet, Didier | Model (Model) | Demogenetic models applied (dadi, moments, divmigrate) |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0) (License comes into effect after moratorium ends)
Status:
Curation Level: Basic curation (CurationLevelB) * Processing Level: PANGAEA data processing level 2 (ProcLevel2)
Size:
4 data points