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Zhang, Yong; Zhang, Yong; Ma, Shuai; Chen, Hanbing; Li, Jiabing; Li, Zhengke; Xu, Kai; Huang, Ruiping; Zhang, Hong; Han, Yonghe; Sun, Jun (2023): Seawater carbonate chemistry and reallocation of elemental content and macromolecules in the coccolithophore Emiliania huxleyi [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.960151

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Abstract:
Global climate change leads to simultaneous changes in multiple environmental drivers in the marine realm. Although physiological characterization of coccolithophores has been studied under climate change, there is limited knowledge on the biochemical responses of this biogeochemically important phytoplankton group to changing multiple environmental drivers. Here, we investigate the interactive effects of reduced phosphorus availability (4 to 0.4 µmol L−1), elevated pCO2 concentrations (426 to 946 µatm), and increasing light intensity (40 to 300 µmol photons m−2 s−1) on elemental content and macromolecules of the cosmopolitan coccolithophore Emiliania huxleyi. Reduced phosphorus availability reduces particulate organic nitrogen (PON) and protein contents per cell under 40 µmol photons m−2 s−1 but not under 300 µmol photons m−2 s−1. Reduced phosphorus availability and elevated pCO2 concentrations act synergistically to increase particulate organic carbon (POC) and carbohydrate contents per cell under 300 µmol photons m−2 s−1 but not under 40 µmol photons m−2 s−1. Reduced phosphorus availability, elevated pCO2 concentrations, and increasing light intensity act synergistically to increase the allocation of POC to carbohydrates. Under elevated pCO2 concentrations and increasing light intensity, enhanced carbon fixation could increase carbon storage in the phosphorus-limited regions of the oceans where E. huxleyi dominates the phytoplankton assemblages. In each type of light intensity, elemental-carbon-to-phosphorus (C:P) and nitrogen-to-phosphorus (N:P) ratios decrease with increasing growth rate. These results suggest that coccolithophores could reallocate chemical elements and energy to synthesize macromolecules efficiently, which allows them to regulate their elemental content and growth rate to acclimate to changing environmental conditions.
Keyword(s):
Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Chromista; Emiliania huxleyi; Growth/Morphology; Haptophyta; Laboratory experiment; Laboratory strains; Light; Macro-nutrients; Not applicable; Pelagos; Phytoplankton; Single species
Supplement to:
Zhang, Yong; Zhang, Yong; Ma, Shuai; Chen, Hanbing; Li, Jiabing; Li, Zhengke; Xu, Kai; Huang, Ruiping; Zhang, Hong; Han, Yonghe; Sun, Jun (2023): Reallocation of elemental content and macromolecules in the coccolithophore Emiliania huxleyi to acclimate to climate change. Biogeosciences, 20(7), 1299-1312, https://doi.org/10.5194/bg-20-1299-2023
Documentation:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2022): seacarb: seawater carbonate chemistry with R. R package version 3.3.1. https://cran.r-project.org/web/packages/seacarb/index.html
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-06-28.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
Type of studyStudy typeZhang, Yong
Species, unique identificationSpecies UIDZhang, Yong
Species, unique identification (URI)Species UID (URI)Zhang, Yong
Species, unique identification (Semantic URI)Species UID (Semantic URI)Zhang, Yong
TreatmentTreatZhang, Yong
TreatmentTreatZhang, Yong
TreatmentTreatZhang, Yong
Growth rateµ1/dayZhang, Yong
Growth rate, standard deviationµ std dev±Zhang, Yong
10 Carbon, organic, particulate, per cellPOC/cellpg/#Zhang, Yong
11 Carbon, organic, particulate, standard deviationPOC std dev±Zhang, Yong
12 Nitrogen, organic, particulate, per cellPON/cellpg/#Zhang, Yong
13 Particulate organic nitrogen per cell, standard deviationPON/cell std dev±Zhang, Yong
14 Phosphorus, organic, particulate, per cellPOP/cellpg/#Zhang, Yong
15 Phosphorus, organic, particulate, per cell, standard deviationPOP/cell std dev±Zhang, Yong
16 Carbon, inorganic, particulate, per cellPIC/cellpg/#Zhang, Yong
17 Particulate inorganic carbon per cell, standard deviationPIC/cell std dev±Zhang, Yong
18 Carbon, organic, particulate/Nitrogen, organic, particulate ratioPOC/PONZhang, Yong
19 Carbon, organic, particulate/Nitrogen, organic, particulate ratio, standard deviationPOC/PON std dev±Zhang, Yong
20 Carbon, organic, particulate/Phosphorus, organic, particulate ratioPOC/POPZhang, Yong
21 Carbon, organic, particulate/Phosphorus, organic, particulate ratio, standard deviationPOC/POP std dev±Zhang, Yong
22 Nitrogen, organic, particulate/Phosphorus, organic, particulate ratioPON/POPZhang, Yong
23 Nitrogen, organic, particulate/Phosphorus, organic, particulate ratio, standard deviationPON/POP std dev±Zhang, Yong
24 Particulate inorganic carbon/particulate organic carbon ratioPIC/POCZhang, Yong
25 Particulate inorganic carbon/particulate organic carbon ratio, standard deviationPIC/POC ratio std dev±Zhang, Yong
26 Carbohydrates, per cellCHO/cellpg/#Zhang, Yong
27 Carbohydrates, per cell, standard deviationCHO/cell std dev±Zhang, Yong
28 Protein per cellProtein/cellpg/#Zhang, Yong
29 Proteins, standard deviationProtein std dev±Zhang, Yong
30 PercentagePerc%Zhang, YongPOC allocated to carbohydrate
31 Percentage, standard deviationPerc std dev±Zhang, YongPOC allocated to carbohydrate
32 PercentagePerc%Zhang, YongPOC allocated to protein
33 Percentage, standard deviationPerc std dev±Zhang, YongPOC allocated to protein
34 PercentagePerc%Zhang, YongPON allocated to protein
35 Percentage, standard deviationPerc std dev±Zhang, YongPON allocated to protein
36 SalinitySalZhang, Yong
37 Temperature, waterTemp°CZhang, Yong
38 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmZhang, YongCalculated using CO2SYS
39 Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Zhang, YongCalculated using CO2SYS
40 pHpHZhang, YongSpectrophotometrictotal scale
41 pH, standard deviationpH std dev±Zhang, YongSpectrophotometrictotal scale
42 Alkalinity, totalATµmol/kgZhang, YongPotentiometric titration
43 Alkalinity, total, standard deviationAT std dev±Zhang, YongPotentiometric titration
44 Carbon, inorganic, dissolvedDICµmol/kgZhang, YongCalculated using CO2SYS
45 Carbon, inorganic, dissolved, standard deviationDIC std dev±Zhang, YongCalculated using CO2SYS
46 Bicarbonate ion[HCO3]-µmol/kgZhang, YongCalculated using CO2SYS
47 Bicarbonate ion, standard deviation[HCO3]- std dev±Zhang, YongCalculated using CO2SYS
48 Carbonate ion[CO3]2-µmol/kgZhang, YongCalculated using CO2SYS
49 Carbonate ion, standard deviation[CO3]2- std dev±Zhang, YongCalculated using CO2SYS
50 Phosphorus, inorganic, dissolvedDIPµmol/lZhang, Yong
51 Phosphorus, inorganic, dissolved, standard deviationDIP std dev±Zhang, Yong
52 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
53 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
54 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
55 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
56 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
57 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
58 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
59 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
60 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
460 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Study type

Species UID

Species UID (URI)

Species UID (Semantic URI)

Treat

Treat

Treat

µ [1/day]

µ std dev [±]
10 
POC/cell [pg/#]
11 
POC std dev [±]
12 
PON/cell [pg/#]
13 
PON/cell std dev [±]
14 
POP/cell [pg/#]
15 
POP/cell std dev [±]
16 
PIC/cell [pg/#]
17 
PIC/cell std dev [±]
18 
POC/PON
19 
POC/PON std dev [±]
20 
POC/POP
21 
POC/POP std dev [±]
22 
PON/POP
23 
PON/POP std dev [±]
24 
PIC/POC
25 
PIC/POC ratio std dev [±]
26 
CHO/cell [pg/#]
27 
CHO/cell std dev [±]
28 
Protein/cell [pg/#]
29 
Protein std dev [±]
30 
Perc [%]
(POC allocated to carbohydrate)
31 
Perc std dev [±]
(POC allocated to carbohydrate)
32 
Perc [%]
(POC allocated to protein)
33 
Perc std dev [±]
(POC allocated to protein)
34 
Perc [%]
(PON allocated to protein)
35 
Perc std dev [±]
(PON allocated to protein)
36 
Sal
37 
Temp [°C]
38 
pCO2water_SST_wet [µatm]
(Calculated using CO2SYS)
39 
pCO2 std dev [±]
(Calculated using CO2SYS)
40 
pH
(total scale, Spectrophotometric)
41 
pH std dev [±]
(total scale, Spectrophotometric)
42 
AT [µmol/kg]
(Potentiometric titration)
43 
AT std dev [±]
(Potentiometric titration)
44 
DIC [µmol/kg]
(Calculated using CO2SYS)
45 
DIC std dev [±]
(Calculated using CO2SYS)
46 
[HCO3]- [µmol/kg]
(Calculated using CO2SYS)
47 
[HCO3]- std dev [±]
(Calculated using CO2SYS)
48 
[CO3]2- [µmol/kg]
(Calculated using CO2SYS)
49 
[CO3]2- std dev [±]
(Calculated using CO2SYS)
50 
DIP [µmol/l]
51 
DIP std dev [±]
52 
CSC flag
(Calculated using seacarb afte...)
53 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
54 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
55 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
56 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
57 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
58 
DIC [µmol/kg]
(Calculated using seacarb afte...)
59 
Omega Arg
(Calculated using seacarb afte...)
60 
Omega Cal
(Calculated using seacarb afte...)
laboratoryEmiliania huxleyimarinespecies.orgurn:lsid:marinespecies.org:taxname:115104Low light intensityHigh DIPLow CO20.910.038.340.571.490.160.160.012.120.226.570.43133.37.820.402.530.260.041.450.155.230.556.950.4133.263.2456.848.96332040348.060.0123462320742118611820023.200.03813.05398.41399.771891.78186.192091.032.934.52
laboratoryEmiliania huxleyimarinespecies.orgurn:lsid:marinespecies.org:taxname:115104Low light intensityHigh DIPHigh CO20.880.018.730.321.580.120.150.011.450.176.460.52153.813.923.983.370.170.021.810.165.370.398.310.8532.581.9854.556.513320881207.770.0123513322163220743011423.120.08828.16859.66862.592093.46105.672227.291.662.57
laboratoryEmiliania huxleyimarinespecies.orgurn:lsid:marinespecies.org:taxname:115104Low light intensityLow DIPLow CO20.830.028.200.361.230.060.080.012.440.117.780.46282.431.236.303.540.300.021.790.163.730.278.710.7024.152.5248.412.46332032948.130.012332242024221787192253<0.04810.68325.94327.051818.37210.272039.323.305.10
laboratoryEmiliania huxleyimarinespecies.orgurn:lsid:marinespecies.org:taxname:115104Low light intensityLow DIPHigh CO20.700.038.040.241.200.100.070.012.060.377.870.54313.040.540.107.420.260.041.940.163.800.159.640.5825.071.6951.075.40332073087.840.012349242189232033221322<0.04823.50717.30719.742052.29121.712197.501.912.95
laboratoryEmiliania huxleyimarinespecies.orgurn:lsid:marinespecies.org:taxname:115104High light intensityHigh DIPLow CO21.350.0310.530.701.650.050.220.013.740.227.450.28124.23.516.680.470.360.023.580.416.450.3613.621.4332.491.6962.622.88332035798.090.0122354119593517493019962.860.06811.42348.72349.911774.25187.111972.792.944.54
laboratoryEmiliania huxleyimarinespecies.orgurn:lsid:marinespecies.org:taxname:115104High light intensityHigh DIPHigh CO21.330.0211.040.421.890.070.210.012.410.416.830.32137.88.520.211.470.220.044.300.176.970.2215.600.9833.511.4159.121.21332079177.800.0122962021512020071811812.700.06825.46777.02779.662027.54109.662162.661.722.66
laboratoryEmiliania huxleyimarinespecies.orgurn:lsid:marinespecies.org:taxname:115104High light intensityLow DIPLow CO21.340.0211.730.191.510.070.120.014.830.349.090.44259.723.228.632.800.410.034.960.246.250.2916.921.0428.231.3566.354.06332030348.160.01235413202411177392413<0.0489.91302.41303.441807.76223.992041.663.525.44
laboratoryEmiliania huxleyimarinespecies.orgurn:lsid:marinespecies.org:taxname:115104High light intensityLow DIPHigh CO21.120.0212.700.501.560.060.100.013.790.499.500.11316.930.433.332.850.300.045.850.496.280.3018.390.9626.211.2764.442.733320735197.830.012319692162652011601285<0.04823.80726.51728.982031.33117.732172.851.852.86