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Orrante‑Alcaraz, Jessica M; Carballo, José Luis; Yáñez, Benjamín (2023): Seawater carbonate chemistry and seasonal net calcification by secondary calcifiers in coral reefs of the Eastern Tropical Pacific Ocean [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.960042

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Abstract:
This study assesses whether secondary calcification is driven by a contrasting seasonal pattern (rainy vs dry) that occurs in the Eastern Tropical Pacific (ETP). Secondary calcifiers net calcification rates and coverage were measured in two reefs: the semi-enclosed Bahía Tiburón reef (BT [21°52′30 “N, 105°54/54 “W]) and the open Las Monas fringing reef (LM [21°51ʹ00ʹʹN, 105°52ʹ45ʹʹW]). Measurements were made from 2013 to 2016 using Calcification Accretion Units (CAUs). Seawater temperature, illuminance, pCO2, pH, ΩCa, and ΩAr were also measured. Low means of pCO2, and high means of ΩCa and ΩAr, were measured during the rainy season. At Las Monas, the composition of the calcifier community differed between seasons. A seasonal effect on net calcification was recorded in the semi-enclosed reef and in the exposed microhabitat of both reefs. Overall, net calcification (mean ± SD) was 1.17 ± 1.13 g·CaCO3·m−2·day−1. Calcification in the open fringing reef (1.51 ± 1.32 g·CaCO3·m−2·day−1) was almost double that in the semi-enclosed reef (0.83 ± 0.78 g·CaCO3·m−2·day−1). Calcification also decreased dramatically between 2014 (1.57 g·CaCO3·m−2·day−1) and 2016 (0.99 g·CaCO3·m−2·day−1). The ENSO event of 2015 raised the water temperature almost 1 °C above the decadal average, which led to a mass coral bleaching in both reefs. That thermal stress might explain the calcification decline in 2015–2016, but probably also obscured a clearer seasonal pattern in net calcification. This study is the first to show that anomalous and persistent high seawater temperatures can affect carbonate production by secondary calcifiers.
Keyword(s):
Benthos; Calcification/Dissolution; Coast and continental shelf; Community composition and diversity; Entire community; Field observation; North Pacific; Rocky-shore community; Temperature; Tropical; Upwelling
Supplement to:
Orrante‑Alcaraz, Jessica M; Carballo, José Luis; Yáñez, Benjamín (2023): Seasonal net calcification by secondary calcifiers in coral reefs of the Eastern Tropical Pacific Ocean. Marine Biology, 170(2), 16, https://doi.org/10.1007/s00227-022-04158-0
Documentation:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2022): seacarb: seawater carbonate chemistry with R. R package version 3.3.1. https://cran.r-project.org/web/packages/seacarb/index.html
Coverage:
Median Latitude: 21.862500 * Median Longitude: -105.897050 * South-bound Latitude: 21.850000 * West-bound Longitude: -105.915000 * North-bound Latitude: 21.875000 * East-bound Longitude: -105.879100
Event(s):
Bahia_Tiburon * Latitude: 21.875000 * Longitude: -105.915000 * Method/Device: Experiment (EXP)
Las_Monas * Latitude: 21.850000 * Longitude: -105.879100 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-06-26.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventOrrante‑Alcaraz, Jessica M
2Type of studyStudy typeOrrante‑Alcaraz, Jessica M
3CodeCodeOrrante‑Alcaraz, Jessica M
4CoverageCov%Orrante‑Alcaraz, Jessica Mbarnacle
5CoverageCov%Orrante‑Alcaraz, Jessica Mbryozoan
6CoverageCov%Orrante‑Alcaraz, Jessica Mcca
7CoverageCov%Orrante‑Alcaraz, Jessica Mmollusc
8CoverageCov%Orrante‑Alcaraz, Jessica Mpolychaete
9CoverageCov%Orrante‑Alcaraz, Jessica Mtotal
10CoverageCov%Orrante‑Alcaraz, Jessica Mno
11SeasonSeasonOrrante‑Alcaraz, Jessica M
12SiteSiteOrrante‑Alcaraz, Jessica M
13Year of samplingYear samplOrrante‑Alcaraz, Jessica M
14MicrohabitatMicrohabitatOrrante‑Alcaraz, Jessica M
15ReplicateReplOrrante‑Alcaraz, Jessica M
16Calcification rateCalc rateg/m2/dayOrrante‑Alcaraz, Jessica M
17SalinitySalOrrante‑Alcaraz, Jessica M
18Temperature, waterTemp°COrrante‑Alcaraz, Jessica M
19Alkalinity, totalATµmol/kgOrrante‑Alcaraz, Jessica M
20pHpHOrrante‑Alcaraz, Jessica MPotentiometrictotal scale
21Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmOrrante‑Alcaraz, Jessica MCalculated using CO2SYS
22Calcite saturation stateOmega CalOrrante‑Alcaraz, Jessica MCalculated using CO2SYS
23Aragonite saturation stateOmega ArgOrrante‑Alcaraz, Jessica MCalculated using CO2SYS
24Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
25Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
26Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
27Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
18504 data points

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