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Edmunds, Peter J; Doo, Steve S; Carpenter, Robert C (2023): Seawater carbonate chemistry and changes in coral reef community structure in response to year‑long incubations under contrasting pCO2 regimes [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.959725

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Abstract:
Coral reefs are threatened by ocean acidification (OA), which depresses net calcification of corals, calcified algae, and coral reef communities. These effects have been quantified for many organisms, but most experiments last weeks-to-months, and do not test for effects on community structure. Here, the effects of OA on back reef communities from Mo'orea, French Polynesia (17.492 S, 149.826 W), were tested from 12 November 2015 to 16 November 2016 in outdoor flumes maintained at mean pCO2 levels of 364 µatm, 564 µatm, 761 µatm, and 1067 µatm. The communities consisted of four corals and two calcified algae, with change in mass (Gnet, a combination of gross accretion and dissolution) and percent cover recorded monthly. For massive Porites and Montipora spp., Gnet differed among treatments, and at 1067 µatm (relative to ambient) was reduced and still positive; for Porolithon onkodes, all of which died, Gnet was negative at high pCO2, revealing dissolution (sample sizes were too small for analysis of Gnet for other taxa). Growth rates (% cover month−1) were unaffected by pCO2 for Montipora spp., P. rus, Pocillopora verrucosa, and Lithophyllum kotschyanum, but were depressed for massive Porites at 564 µatm. Multivariate community structure changed among seasons, and the variation under all elevated pCO2 treatments differed from that recorded at 364 µatm, and was greatest under 564 µatm and 761 µatm pCO2. Temporal variation in multivariate community structure could not be attributed solely to the effects of OA on the chemical and physical properties of seawater. Together, these results suggest that coral reef community structure may be more resilient to OA than suggested by the negative effects of high pCO2 on Gnet of their component organisms.
Keyword(s):
Animalia; Benthic animals; Benthos; Calcification/Dissolution; Cnidaria; Coast and continental shelf; Community composition and diversity; Containers and aquaria (20-1000 L or < 1 m**2); Entire community; Laboratory experiment; Lithophyllum kotschyanum; Macroalgae; massive Porites; Montipora sp.; Plantae; Pocillopora verrucosa; Porites rus; Porolithon onkodes; Rhodophyta; Rocky-shore community; Single species; South Pacific; Tropical
Supplement to:
Edmunds, Peter J; Doo, Steve S; Carpenter, Robert C (2019): Changes in coral reef community structure in response to year-long incubations under contrasting pCO2 regimes. Marine Biology, 166(7), 94, https://doi.org/10.1007/s00227-019-3540-2
Source:
Edmunds, Peter J; Doo, Steve S; Carpenter, Robert C (2019): MCR LTER: Coral Reef: Community structure outdoor flume data in support of Edmunds 2019 Marine Biology. Environmental Data Initiative, https://doi.org/10.6073/pasta/6aae5ade59fb1a912f659c1336e34091
Documentation:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2022): seacarb: seawater carbonate chemistry with R. R package version 3.3.1. https://cran.r-project.org/web/packages/seacarb/index.html
Coverage:
Latitude: -17.490700 * Longitude: -149.826000
Event(s):
Moorea_coral * Latitude: -17.490700 * Longitude: -149.826000 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-06-08.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Type of studyStudy typeEdmunds, Peter J
2IdentificationIDEdmunds, Peter JFlume
3Treatment: partial pressure of carbon dioxideT:pCO2µatmEdmunds, Peter J
4Numbern#Edmunds, Peter JMonth
5Year of samplingYear samplEdmunds, Peter J
6MonthMonthEdmunds, Peter J
7SpeciesSpeciesEdmunds, Peter J
8IdentificationIDEdmunds, Peter Jassigned in the flume
9IdentificationIDEdmunds, Peter Jfor this purpose
10AreaArea%Edmunds, Peter Jthe floor of the flume occupied by each organism, blanks = missing data or dead
11AreaArea%Edmunds, Peter Jsame data are "1 Area%" with missing values replaced by linear interpolation except where dead (0)
12GroupGroupEdmunds, Peter J
13Dry massDry mgEdmunds, Peter J
14Temperature, waterTemp°CEdmunds, Peter J
15Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmEdmunds, Peter J
16Alkalinity, totalATµmol/kgEdmunds, Peter JPotentiometric titration
17pHpHEdmunds, Peter JPotentiometrictotal scale
18SalinitySalEdmunds, Peter J
19Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
20Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
21Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
22Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
23Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
24Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
25Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
26Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
27Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
48833 data points

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