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Horn, Henriette G; Sander, Nils; Stuhr, Annegret; Algueró-Muñiz, Maria; Bach, Lennart Thomas; Löder, Martin G J; Boersma, Maarten; Riebesell, Ulf; Aberle, Nicole (2016): Seawater carbonate chemistry and Microzooplankton and phytoplankton community composition of KOSMOS 2013 Gullmar Fjord mesocosm study [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.956200

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Abstract:
Ocean acidification is considered as a crucial stressor for marine communities. In this study, we tested the effects of the IPCC RPC6.0 end-of-century acidification scenario on a natural plankton community in the Gullmar Fjord, Sweden, during a long-term mesocosm experiment from a spring bloom to a mid-summer situation. The focus of this study was on microzooplankton and its interactions with phytoplankton and mesozooplankton. The microzooplankton community was dominated by ciliates, especially small Strombidium sp., with the exception of the last days when heterotrophic dinoflagellates increased in abundance. We did not observe any effects of high CO2 on the community composition and diversity of microzooplankton. While ciliate abundance, biomass and growth rate were not affected by elevated CO2, we observed a positive effect of elevated CO2 on dinoflagellate abundances. Additionally, growth rates of dinoflagellates were significantly higher in the high CO2 treatments. Given the higher Chlorophyll a content measured under high CO2, our results point at mainly indirect effects of CO2 on microzooplankton caused by changes in phytoplankton standing stocks, in this case most likely an increase in small-sized phytoplankton of <8 μm. Overall, the results from the present study covering the most important part of the growing season indicate that coastal microzooplankton communities are rather robust towards realistic acidification scenarios.
Keyword(s):
Coast and continental shelf; Community composition and diversity; Entire community; Field experiment; Mesocosm or benthocosm; North Atlantic; Pelagos; Temperate
Supplement to:
Horn, Henriette G; Sander, Nils; Stuhr, Annegret; Algueró-Muñiz, Maria; Bach, Lennart Thomas; Löder, Martin G J; Boersma, Maarten; Riebesell, Ulf; Aberle, Nicole (2016): Low CO2 Sensitivity of Microzooplankton Communities in the Gullmar Fjord, Skagerrak: Evidence from a Long-Term Mesocosm Study. PLoS ONE, 11(11), e0165800, https://doi.org/10.1371/journal.pone.0165800
Source:
Horn, Henriette G; Sander, Nils; Stuhr, Annegret; Algueró-Muñiz, Maria; Bach, Lennart Thomas; Löder, Martin G J; Boersma, Maarten; Riebesell, Ulf; Aberle, Nicole (2016): KOSMOS 2013 Gullmar Fjord mesocosm study: Microzooplankton and phytoplankton community composition [dataset publication series]. PANGAEA, https://doi.org/10.1594/PANGAEA.867572
Documentation:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
Coverage:
Latitude: 58.265000 * Longitude: 11.478330
Date/Time Start: 2013-03-08T00:00:00 * Date/Time End: 2013-06-20T00:00:00
Event(s):
Gullmar_fjord_2013 * Latitude: 58.265000 * Longitude: 11.478330 * Date/Time Start: 2013-03-07T00:00:00 * Date/Time End: 2013-06-28T00:00:00 * Location: Gullmar Fjord, Skagerrak, Sweden * Method/Device: Biological sample (BIOS)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-02-28.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
TypeTypeHorn, Henriette GStudy
DATE/TIMEDate/TimeHorn, Henriette GGeocode
Day of experimentDOEdayHorn, Henriette G
TreatmentTreatHorn, Henriette G
IdentificationIDHorn, Henriette G
AbundanceAbund#/lHorn, Henriette GMyrionecta rubra, <30µm
AbundanceAbund#/lHorn, Henriette GMyrionecta rubra, >30µm
AbundanceAbund#/lHorn, Henriette GEuplotes sp.
AbundanceAbund#/lHorn, Henriette GLohmanniella oviformis
10 AbundanceAbund#/lHorn, Henriette GStrobilidium sp., <30µm
11 AbundanceAbund#/lHorn, Henriette GStrobilidium sp., >30µm
12 AbundanceAbund#/lHorn, Henriette GStrobilidium sp., <40µm
13 AbundanceAbund#/lHorn, Henriette GStrobilidium sp., 40-55µm
14 AbundanceAbund#/lHorn, Henriette GStrobilidium sp., >55µm
15 AbundanceAbund#/lHorn, Henriette GLaboea strobila
16 AbundanceAbund#/lHorn, Henriette GTontonia gracillima
17 AbundanceAbund#/lHorn, Henriette GSuctoria
18 AbundanceAbund#/lHorn, Henriette GCiliates, other
19 AbundanceAbund#/lHorn, Henriette GDinophysis sp.
20 AbundanceAbund#/lHorn, Henriette GProtoperidinium sp.
21 AbundanceAbund#/lHorn, Henriette GDinoflagellates, thecate, <30µm
22 AbundanceAbund#/lHorn, Henriette GDinoflagellates, thecate, 30-55µm
23 AbundanceAbund#/lHorn, Henriette GDinoflagellates, thecate, >55µm
24 AbundanceAbund#/lHorn, Henriette GGyrodinium sp., <30µm
25 AbundanceAbund#/lHorn, Henriette GGyrodinium sp., 30-55µm
26 AbundanceAbund#/lHorn, Henriette GGyrodinium sp., >55µm
27 AbundanceAbund#/lHorn, Henriette GDinoflagellates, athecate, <30µm
28 AbundanceAbund#/lHorn, Henriette GDinoflagellates, athecate, 3-55µm
29 AbundanceAbund#/lHorn, Henriette GCeratium fusus
30 AbundanceAbund#/lHorn, Henriette GCeratium lineatum
31 AbundanceAbund#/lHorn, Henriette GCeratium longipes
32 AbundanceAbund#/lHorn, Henriette GCeratium tripos
33 AbundanceAbund#/lHorn, Henriette GArcocellulus sp.
34 AbundanceAbund#/lHorn, Henriette GChaetoceros danicus
35 AbundanceAbund#/lHorn, Henriette GChaetoceros decipiens
36 AbundanceAbund#/lHorn, Henriette GCoscinodiscus cf. concinnus
37 AbundanceAbund#/lHorn, Henriette GCylindrotheca sp.
38 AbundanceAbund#/lHorn, Henriette GDetonula sp.
39 AbundanceAbund#/lHorn, Henriette GFragilaria sp.
40 AbundanceAbund#/lHorn, Henriette GLicmophora sp.
41 AbundanceAbund#/lHorn, Henriette GMelosira sp.
42 AbundanceAbund#/lHorn, Henriette GNavicula cf. delicatula, 20-30µm
43 AbundanceAbund#/lHorn, Henriette GNavicula cf. delicatula, 40-60µm
44 AbundanceAbund#/lHorn, Henriette GNavicula cf. granii, 20-30µm
45 AbundanceAbund#/lHorn, Henriette GNavicula cf. granii, 40-60µm
46 AbundanceAbund#/lHorn, Henriette GPseudo-nitzschia sp., 100µm
47 AbundanceAbund#/lHorn, Henriette GPseudo-nitzschia sp., 60µm
48 AbundanceAbund#/lHorn, Henriette GSkeletonema marinoi
49 AbundanceAbund#/lHorn, Henriette GThalassionema sp.
50 AbundanceAbund#/lHorn, Henriette GThalassiosira sp.
51 AbundanceAbund#/lHorn, Henriette GTeleaulax sp.
52 AbundanceAbund#/lHorn, Henriette GHemiselmis sp.
53 Temperature, waterTemp°CHorn, Henriette G
54 SalinitySalHorn, Henriette G
55 Carbon, inorganic, dissolvedDICµmol/kgHorn, Henriette G
56 pHpHHorn, Henriette GStereomicroscopy (Leica)total scale, in situ
57 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmHorn, Henriette Gin situ
58 Phosphate[PO4]3-µmol/lHorn, Henriette G
59 SilicateSi(OH)4µmol/lHorn, Henriette G
60 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
61 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
62 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
63 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
64 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
65 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
66 Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
67 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
68 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
9769 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Type
(Study)

Date/Time

DOE [day]

Treat

ID

Abund [#/l]
(Myrionecta rubra, <30µm)

Abund [#/l]
(Myrionecta rubra, >30µm)

Abund [#/l]
(Euplotes sp.)

Abund [#/l]
(Lohmanniella oviformis)
10 
Abund [#/l]
(Strobilidium sp., <30µm)
11 
Abund [#/l]
(Strobilidium sp., >30µm)
12 
Abund [#/l]
(Strobilidium sp., <40µm)
13 
Abund [#/l]
(Strobilidium sp., 40-55µm)
14 
Abund [#/l]
(Strobilidium sp., >55µm)
15 
Abund [#/l]
(Laboea strobila)
16 
Abund [#/l]
(Tontonia gracillima)
17 
Abund [#/l]
(Suctoria)
18 
Abund [#/l]
(Ciliates, other)
19 
Abund [#/l]
(Dinophysis sp.)
20 
Abund [#/l]
(Protoperidinium sp.)
21 
Abund [#/l]
(Dinoflagellates, thecate, <30µm)
22 
Abund [#/l]
(Dinoflagellates, thecate, 30-...)
23 
Abund [#/l]
(Dinoflagellates, thecate, >55µm)
24 
Abund [#/l]
(Gyrodinium sp., <30µm)
25 
Abund [#/l]
(Gyrodinium sp., 30-55µm)
26 
Abund [#/l]
(Gyrodinium sp., >55µm)
27 
Abund [#/l]
(Dinoflagellates, athecate, <30µm)
28 
Abund [#/l]
(Dinoflagellates, athecate, 3-...)
29 
Abund [#/l]
(Ceratium fusus)
30 
Abund [#/l]
(Ceratium lineatum)
31 
Abund [#/l]
(Ceratium longipes)
32 
Abund [#/l]
(Ceratium tripos)
33 
Abund [#/l]
(Arcocellulus sp.)
34 
Abund [#/l]
(Chaetoceros danicus)
35 
Abund [#/l]
(Chaetoceros decipiens)
36 
Abund [#/l]
(Coscinodiscus cf. concinnus)
37 
Abund [#/l]
(Cylindrotheca sp.)
38 
Abund [#/l]
(Detonula sp.)
39 
Abund [#/l]
(Fragilaria sp.)
40 
Abund [#/l]
(Licmophora sp.)
41 
Abund [#/l]
(Melosira sp.)
42 
Abund [#/l]
(Navicula cf. delicatula, 20-30µm)
43 
Abund [#/l]
(Navicula cf. delicatula, 40-60µm)
44 
Abund [#/l]
(Navicula cf. granii, 20-30µm)
45 
Abund [#/l]
(Navicula cf. granii, 40-60µm)
46 
Abund [#/l]
(Pseudo-nitzschia sp., 100µm)
47 
Abund [#/l]
(Pseudo-nitzschia sp., 60µm)
48 
Abund [#/l]
(Skeletonema marinoi)
49 
Abund [#/l]
(Thalassionema sp.)
50 
Abund [#/l]
(Thalassiosira sp.)
51 
Abund [#/l]
(Teleaulax sp.)
52 
Abund [#/l]
(Hemiselmis sp.)
53 
Temp [°C]
54 
Sal
55 
DIC [µmol/kg]
56 
pH
(total scale, in situ, Stereom...)
57 
pCO2water_SST_wet [µatm]
(in situ)
58 
[PO4]3- [µmol/l]
59 
Si(OH)4 [µmol/l]
60 
CSC flag
(Calculated using seacarb afte...)
61 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
62 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
63 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
64 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
65 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
66 
AT [µmol/kg]
(Calculated using seacarb afte...)
67 
Omega Arg
(Calculated using seacarb afte...)
68 
Omega Cal
(Calculated using seacarb afte...)
field2013-03-101low CO21000024002600000002020060800000001.529.02078.28.1352.90.7699.184920.60334.94336.391964.7192.892196.821.422.29
field2013-03-101low CO230000002540000005204006000000001.429.22080.88.1349.30.7919.042920.64334.71336.161967.0693.102199.901.422.29
field2013-03-101low CO250400000218000000320200140200000001.429.32081.48.1351.50.7778.949920.62334.60336.051967.4293.362200.981.422.30
field2013-03-101low CO29020000031400002003000012000000001.429.32080.18.1352.50.7238.934920.61334.39335.841966.1993.302199.581.422.29
field2013-03-101low CO2106000000186000000200040002000001.428.92079.98.1356.60.7578.967920.71335.19336.651966.8392.372197.531.412.28
field2013-03-101high CO220000002380000200100001202020000001.429.22171.77.8778.30.7619.065943.52705.79708.852078.8649.312202.760.751.21
field2013-03-101high CO2400000026800002001600080200000001.529.12168.77.8782.50.7699.032943.38705.78708.832076.0049.322199.870.751.21
field2013-03-101high CO260400000274000000300200140200000001.529.12178.67.7823.30.7899.017954.84892.13895.992084.4339.332183.580.600.97
field2013-03-101high CO2702000001100040020080002020600000001.529.22176.77.7855.50.7458.820954.73890.87894.732082.5739.402181.910.600.97
field2013-03-101high CO2804000600192000000160020460400000001.629.12176.87.7821.40.7438.843954.63892.14896.002082.7139.462182.130.600.97
field2013-03-189low CO2100000088000000200001000000000.528.92073.08.1350.00.71810.005921.23331.99333.441962.9388.842185.381.352.19
field2013-03-189low CO23014000001400002020040008000000000.529.22082.18.1346.50.7219.804921.25332.82334.281970.9589.902196.151.372.21
field2013-03-189low CO2502000008600000080006000000000.529.32083.28.1345.10.7449.790921.23332.80334.261971.8090.172197.761.372.22
field2013-03-189low CO2920000001140020000200006000000000.529.32082.28.1345.20.7669.747921.22332.64334.101970.8590.132196.751.372.22
field2013-03-189low CO21000000022000000800028000000000.528.92074.78.1349.40.77810.070921.25332.26333.721964.5488.912187.201.362.19
field2013-03-189high CO224000000110002004001000056060200000600.529.22179.07.7804.50.7179.723956.45884.26888.142084.6937.852180.300.580.93
field2013-03-189high CO2406000001240002020020008000000000.529.02173.67.7802.10.73010.026956.44883.01886.882079.5937.572174.460.570.93
field2013-03-189high CO262060000015400000010000100200000000.529.12180.57.7814.70.7889.797956.56885.34889.222086.1637.782181.600.580.93
field2013-03-189high CO2740000007600002008000000000000.529.22175.87.7836.40.7379.694956.37882.96886.832081.6337.802177.140.580.93
field2013-03-189high CO28000000520020000800060200000000.629.02172.77.7809.80.7559.853956.25883.40887.272078.7537.712173.970.570.93
field2013-03-2617low CO210000004000200001000060600000002.329.02074.68.1372.10.6877.586920.06336.18337.621958.8595.692197.521.462.36
field2013-03-2617low CO23020000064060400008000140200000002.229.32083.48.1368.80.6997.618920.13336.75338.191966.8396.442207.521.472.37
field2013-03-2617low CO2502000004200000000030012000200002.229.42086.38.1369.40.6917.524920.14337.01338.451969.3696.812210.991.482.38
field2013-03-2617low CO2900000032040000010000180400000002.129.42081.88.1366.40.6937.458920.15336.06337.501965.4296.222205.751.472.36
field2013-03-2617low CO210040000012000000200016016020000002.229.02082.18.1377.70.7237.485920.19337.17338.621966.2595.662204.751.462.35
field2013-03-2617high CO220600000560000001600016000000002.229.32154.17.8649.40.6927.481942.10704.19707.212061.3550.652188.570.771.25
field2013-03-2617high CO2404000003400000030000180200000002.229.12144.57.8666.80.6917.487942.01701.83704.842052.3250.172178.340.771.23
field2013-03-2617high CO26040000092020000000046032000000202.229.22154.67.8669.10.6957.456942.16704.74707.762061.9150.542188.780.771.24
field2013-03-2617high CO270400000300400000000300200000002.129.32155.67.8685.30.7097.569942.25704.12707.142062.8650.492189.690.771.24
field2013-03-2617high CO2802020000200000000001202600000002.229.12152.07.8683.00.7167.676942.15704.28707.302059.5050.352185.900.771.24
field2013-04-0325low CO2104000001000000040001001200000004.029.12074.18.1359.00.5305.747919.01339.66341.081952.61102.472207.181.572.52
field2013-04-0325low CO230200000620000008000205200000004.029.32075.78.1368.40.5636.315918.98339.49340.911953.66103.062209.901.582.53
field2013-04-0325low CO2540000001400400006000406000020004.029.42080.98.1375.20.6086.241919.00340.13341.551958.32103.582215.861.582.54
field2013-04-0325low CO29060000022000000200018080100000004.029.42071.98.1360.40.5385.774918.92338.66340.071949.85103.132206.421.582.53
field2013-04-0325low CO2100000002000000200010000000004.129.02062.68.1369.10.5655.892918.87338.21339.631941.68102.052195.351.562.51
field2013-04-0325high CO2280000005200002000006000000004.129.32160.47.8725.00.5305.799939.93716.78719.782065.6454.842202.540.841.35
field2013-04-0325high CO24040000001000000802002201801200400004.129.12158.67.8746.70.5476.063939.99717.00719.992064.1054.512200.130.831.34
field2013-04-0325high CO26000000320000002000201000000004.129.22162.37.8758.40.5676.187940.01717.82720.822067.5554.742204.180.841.35
field2013-04-0325high CO270400000401000020000038026020000004.129.32166.97.8780.30.5736.184940.05718.94721.942071.8555.002209.130.841.35
field2013-04-0325high CO2804000001600000000026000000004.129.12158.57.8790.20.5946.493939.98716.96719.962064.0154.512200.080.831.34
field2013-04-1133low CO210600000380200000000120600000004.329.02025.48.2262.00.0202.568914.47261.26262.351885.18125.752196.511.923.09
field2013-04-1133low CO2301200000176006000032000801200000004.329.32059.48.1316.90.2263.243918.66337.47338.881937.29103.452194.321.582.54
field2013-04-1133low CO2520000008006000400800012010002000004.429.42059.18.1314.60.1522.950918.58337.42338.821936.43104.092195.031.592.56
field2013-04-1133low CO29020000076080020002000022000000004.329.42031.18.2265.50.0272.570914.44261.29262.381889.32127.342204.941.953.13
field2013-04-1133low CO2100202020008012000000002003400000004.429.02017.78.2251.20.0012.234914.37260.42261.501877.58125.752189.051.923.09
field2013-04-1133high CO220200000960400000440001801200000004.329.32113.98.0486.90.0972.711924.31439.60441.432004.5785.022215.501.302.09
field2013-04-1133high CO2400200001004000002400016000000004.329.12096.38.0439.70.0132.307924.16436.48438.301988.2483.902196.441.282.06
field2013-04-1133high CO264060000048040006008000220200000004.329.22107.08.0463.20.0402.617924.26438.43440.261998.2184.532207.911.292.08
field2013-04-1133high CO2708000008080000000080200000004.329.32103.68.0439.90.0042.536924.19437.46439.281994.8084.612204.801.292.08
field2013-04-1133high CO282020000016000000200044000000004.329.12125.57.9545.00.0902.920931.01560.08562.422026.5767.932195.361.041.67
field2013-04-1941low CO21020000019800000040000460020000004.629.12023.68.2282.10.0331.572914.31261.30262.391881.90127.392197.271.953.13
field2013-04-1941low CO230180005002068800140024002000028010000600004.629.32059.38.1329.40.1711.325918.49338.09339.501936.16104.652195.911.602.57
field2013-04-1941low CO252400000031600006001400020000000004.729.42067.18.1343.10.1741.638918.48339.37340.781942.91105.712205.161.622.60
field2013-04-1941low CO2940000200073406000200000320000200004.729.42049.98.1304.70.0751.994918.33336.55337.941926.74104.832187.141.602.57
field2013-04-1941low CO2100402000010600000040002401200000004.729.02020.88.2257.10.0031.717914.26261.27262.351879.15127.382194.371.953.13
field2013-04-1941high CO220600400021600200600136000320000200004.729.32112.08.0485.00.0981.544924.00440.40442.232001.7186.292215.621.322.12
field2013-04-1941high CO24000024001620000008000340200000004.729.12081.08.0407.60.0721.299923.71434.47436.271972.7084.592182.811.292.08
field2013-04-1941high CO262000000388002002002200064010000200004.729.22108.28.0471.60.1141.613923.99439.88441.701998.3085.922211.291.312.11
field2013-04-1941high CO270140000013800000046000320040000004.729.32097.18.0431.40.0961.799923.83437.29439.111987.5985.682200.281.312.11
field2013-04-1941high CO2801000000124000000800046000000004.729.02107.67.9505.30.1271.775930.43557.30559.612008.9268.252178.621.041.68
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