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Isah, Raffi R; Enochs, I C; San Diego-McGlone, Maria Lourdes (2022): Seawater carbonate chemistry and benthic community composition at reefs of Bolinao, Philippines [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.955786

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Abstract:
Coral reefs are vulnerable to global ocean acidification (OA) and local human activities will continue to exacerbate coastal OA. In Bolinao, Philippines, intense unregulated fish mariculture has resulted in regional eutrophication. In order to examine the coastal acidification associated with this activity and the impact on nearby coral reefs, water quality and carbonate chemistry parameters were measured at three reef sites, a mariculture site and an offshore, minimally impacted control site during both the wet and dry season. Additionally, benthic community composition was characterized at reef sites, and both autonomous carbonate chemistry sampling and high-frequency pH measurements were used to characterize fine-scale (diel) temporal variability. Water quality was found to be poorer at all reefs during the wet season, when there was stronger outflow of waters from the mariculture area. Carbonate chemistry parameters differed significantly across the reef flat and between seasons, with more acidic conditions occurring during the dry season and increased primary production suppressing further acidification during the wet season. Significant relationships of both total alkalinity (TA) and dissolved inorganic carbon (DIC) with salinity across all stations may imply outflow of acidified water originating from the mariculture area where pH values as low as 7.78 were measured. This apparent mariculture-induced coastal acidification was likely due to organic matter respiration as sustained mariculture will continue to deliver organic matter. While TA-DIC vector diagrams indicate greater contribution of net primary production, net calcification potential in the nearest reef to mariculture area may already be diminished. The two farther reefs, characterized by higher coral cover, indicates healthier ecosystem functioning. Here we show that unregulated fish mariculture activities can lead to localized acidification and impact reef health. As these conditions at times approximate those projected to occur globally due to OA, our results may provide insight into reef persistence potential worldwide. These results also underscore the importance of coastal acidification and indicate that actions taken to mitigate OA on coral reefs should address not only global CO2 emissions but also local perturbations, in this case fish mariculture-induced eutrophication.
Keyword(s):
Benthos; Coast and continental shelf; Community composition and diversity; Entire community; Field observation; North Pacific; Rocky-shore community; Tropical
Supplement to:
Isah, Raffi R; Enochs, I C; San Diego-McGlone, Maria Lourdes (2022): Sea surface carbonate dynamics at reefs of Bolinao, Philippines: Seasonal variation and fish mariculture-induced forcing. Frontiers in Marine Science, 9, 858853, https://doi.org/10.3389/fmars.2022.858853
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-02-16.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
TypeTypeIsah, Raffi RStudy
Station labelStationIsah, Raffi R
SeasonSeasonIsah, Raffi R
TransectTransectIsah, Raffi R
CoverageCov%Isah, Raffi RHard Coral
Coverage, standard deviationCov std dev±Isah, Raffi RHard Coral
CoverageCov%Isah, Raffi RCoralline algae
Coverage, standard deviationCov std dev±Isah, Raffi RCoralline algae
CoverageCov%Isah, Raffi RHalimeda
10 Coverage, standard deviationCov std dev±Isah, Raffi RHalimeda
11 CoverageCov%Isah, Raffi RFleshy macroalgae
12 Coverage, standard deviationCov std dev±Isah, Raffi RFleshy macroalgae
13 CoverageCov%Isah, Raffi RTurf algae/dead coral with algae
14 Coverage, standard deviationCov std dev±Isah, Raffi RTurf algae/dead coral with algae
15 CoverageCov%Isah, Raffi RDead coral
16 Coverage, standard deviationCov std dev±Isah, Raffi RDead coral
17 CoverageCov%Isah, Raffi ROctocoral
18 Coverage, standard deviationCov std dev±Isah, Raffi ROctocoral
19 CoverageCov%Isah, Raffi ROther lifeform
20 Coverage, standard deviationCov std dev±Isah, Raffi ROther lifeform
21 CoverageCov%Isah, Raffi RRubble/sand/rock
22 Coverage, standard deviationCov std dev±Isah, Raffi RRubble/sand/rock
23 Temperature, waterTemp°CIsah, Raffi R
24 Temperature, water, standard deviationTemp std dev±Isah, Raffi R
25 SalinitySalIsah, Raffi R
26 Salinity, standard deviationSal std dev±Isah, Raffi R
27 Alkalinity, totalATµmol/kgIsah, Raffi R
28 Alkalinity, total, standard deviationAT std dev±Isah, Raffi R
29 Carbon, inorganic, dissolvedDICµmol/lIsah, Raffi R
30 Carbon, inorganic, dissolved, standard deviationDIC std dev±Isah, Raffi R
31 pHpHIsah, Raffi Rtotal scale
32 pH, standard deviationpH std dev±Isah, Raffi Rtotal scale
33 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmIsah, Raffi R
34 Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Isah, Raffi R
35 Aragonite saturation stateOmega ArgIsah, Raffi R
36 Aragonite saturation state, standard deviationOmega Arg std dev±Isah, Raffi R
37 Nitrate[NO3]-µmol/lIsah, Raffi R
38 Nitrate, standard deviationNO3 std dev±Isah, Raffi R
39 Nitrite[NO2]-µmol/lIsah, Raffi R
40 Nitrite, standard deviation[NO2]- std dev±Isah, Raffi R
41 Ammonium[NH4]+µmol/lIsah, Raffi R
42 Ammonium, standard deviation[NH4]+ std dev±Isah, Raffi R
43 Phosphate[PO4]3-µmol/lIsah, Raffi R
44 Phosphate, standard deviation[PO4]3- std dev±Isah, Raffi R
45 SilicateSi(OH)4µmol/lIsah, Raffi R
46 Silicate, standard deviationSi(OH)4 std dev±Isah, Raffi R
47 Nitrogen/Phosphorus ratioN/PIsah, Raffi R
48 Nitrogen/Phosphorus ratio, standard deviationN/P std dev±Isah, Raffi R
49 Oxygen, dissolvedDOmg/lIsah, Raffi R
50 Oxygen, dissolved, standard deviationDO std dev±Isah, Raffi R
51 Chlorophyll aChl aµg/lIsah, Raffi R
52 Chlorophyll a, standard deviationChl a std dev±Isah, Raffi R
53 Turbidity (Formazin Turbidity Unit)TurbidityFTUIsah, Raffi R
54 Turbidity, standard deviationTurbidity std dev±Isah, Raffi R
55 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
56 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
57 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
58 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
59 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
60 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
61 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
62 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
63 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
347 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Type
(Study)

Station

Season

Transect

Cov [%]
(Hard Coral)

Cov std dev [±]
(Hard Coral)

Cov [%]
(Coralline algae)

Cov std dev [±]
(Coralline algae)

Cov [%]
(Halimeda)
10 
Cov std dev [±]
(Halimeda)
11 
Cov [%]
(Fleshy macroalgae)
12 
Cov std dev [±]
(Fleshy macroalgae)
13 
Cov [%]
(Turf algae/dead coral with algae)
14 
Cov std dev [±]
(Turf algae/dead coral with algae)
15 
Cov [%]
(Dead coral)
16 
Cov std dev [±]
(Dead coral)
17 
Cov [%]
(Octocoral)
18 
Cov std dev [±]
(Octocoral)
19 
Cov [%]
(Other lifeform)
20 
Cov std dev [±]
(Other lifeform)
21 
Cov [%]
(Rubble/sand/rock)
22 
Cov std dev [±]
(Rubble/sand/rock)
23 
Temp [°C]
24 
Temp std dev [±]
25 
Sal
26 
Sal std dev [±]
27 
AT [µmol/kg]
28 
AT std dev [±]
29 
DIC [µmol/l]
30 
DIC std dev [±]
31 
pH
(total scale)
32 
pH std dev [±]
(total scale)
33 
pCO2water_SST_wet [µatm]
34 
pCO2 std dev [±]
35 
Omega Arg
36 
Omega Arg std dev [±]
37 
[NO3]- [µmol/l]
38 
NO3 std dev [±]
39 
[NO2]- [µmol/l]
40 
[NO2]- std dev [±]
41 
[NH4]+ [µmol/l]
42 
[NH4]+ std dev [±]
43 
[PO4]3- [µmol/l]
44 
[PO4]3- std dev [±]
45 
Si(OH)4 [µmol/l]
46 
Si(OH)4 std dev [±]
47 
N/P
48 
N/P std dev [±]
49 
DO [mg/l]
50 
DO std dev [±]
51 
Chl a [µg/l]
52 
Chl a std dev [±]
53 
Turbidity [FTU]
54 
Turbidity std dev [±]
55 
CSC flag
56 
pH
(total scale)
57 
CO2 [µmol/kg]
58 
fCO2water_SST_wet [µatm]
59 
pCO2water_SST_wet [µatm]
60 
[HCO3]- [µmol/kg]
61 
[CO3]2- [µmol/kg]
62 
Omega Arg
63 
Omega Cal
fieldReef 1Dry44.583.860.921.075.955.0058.902.2522.513.320.820.490.470.445.844.1131.30.233.40.02193.22.41920.87.17.940.01512153.220.070.600.200.140.046.522.160.920.1312.492.767.811.356.881.720.350.140.540.21157.9412.56509.75511.271713.70194.543.234.81
fieldReef 1Wet50.721.147.287.5968.4812.7812.1211.081.521.930.680.489.201.8429.90.730.50.32186.95.21942.544.47.950.085251093.010.470.930.750.060.028.955.840.440.0213.692.2922.7812.906.811.035.292.160.500.33157.9513.25513.57515.121749.83179.423.004.54
fieldReef 2Dry521.873.966.150.773.772.5050.124.0213.855.050.280.330.320.183.641.5431.30.133.40.02183.58.41913.224.67.940.03514493.190.170.800.240.130.027.091.590.700.0611.132.8911.522.815.650.440.200.170.290.04157.9412.56510.02511.541707.58193.063.204.78
fieldReef 2Wet518.964.6118.322.527.362.7829.085.7920.604.420.360.090.120.115.204.8429.60.630.60.32128.33.91850.914.48.030.02406223.310.181.961.060.090.024.531.700.430.0121.084.1215.122.936.840.110.130.070.390.13158.0210.53405.48406.711642.28198.093.315.00
fieldReef 3Dry31.00.133.60.02169.614.21894.67.17.950.04492473.220.220.430.240.130.034.371.050.650.1210.021.917.701.875.920.310.350.230.240.04157.9512.10488.22489.681687.24195.263.234.82
fieldReef 3Wet528.496.6210.471.795.215.2839.085.402.960.9910.813.470.040.092.951.8829.40.431.20.22115.211.01863.610.07.970.02464253.000.110.780.630.080.0210.788.770.410.0117.331.6028.5821.325.910.170.110.040.240.02157.9712.03462.31463.711671.05180.523.004.53