Turner, Lucy M; Madeira, Diana; Ricevuto, Elena; Massa Gallucci, Alexia; Sommer, Ulf; Viant, Mark R; Dineshram, Ramadoss; Gambi, Maria Cristina; Calosi, Piero (2023): Environmental conditions inside and outside the CO2 vent (Ischia, Italy) before and during a reciprocal transplant experiment with Platynereis spp. in September 2013 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.953826
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Published: 2023-02-08 • DOI registered: 2023-03-22
Abstract:
Platynereis spp. were collected via snorkelling or scuba from either inside (40°43′53″N, 13°57′47″E) (stations A1-A3) or outside (40°43'33.33"N, 13°57'36.38"E and 40°44′48″N, 13°56′39″E) (stations C1-C3) the carbon dioxide (CO2) vent on the island of Ischia (Italy) and used in a reciprocal transplant experiment between 04/09/2013 and 16/09/2013. The effect of exposure to high or low partial pressures of CO2 (pCO2) conditions on the proteome and metabolome (metabolome, and lipidome) of worms from different pCO2 regimes was investigated to understand the effect of exposure to different pCO2 conditions on the cellular physiological response. Before and during the transplant experiment water samples were taken to characterise the physio-chemical parameters of sea water used when exposing the worms to: (i) low pCO2 conditions (‘control’ stations C1, C2 and C3) and (ii) high pCO2 conditions (‘acidified’ stations A1, A2, A3). Salinity, temperature, pH NBS (Mettler-Toledo pH meter, Beaumont Leys, UK), total alkalinity (TA) (AS-ALK2, Apollo SciTech, Bogart, USA), dissolved inorganic carbon (DIC), carbon dioxide partial pressure (pCO2), bicarbonate and carbonate ion concentration ([HCO3–] and [CO32–), calcite and aragonite saturation state (Ωcal and Ωara) are provided.
Supplement to:
Turner, Lucy M; Madeira, Diana; Ricevuto, Elena; Massa Gallucci, Alexia; Sommer, Ulf; Viant, Mark R; Dineshram, Ramadoss; Gambi, Maria Cristina; Calosi, Piero (2025): Sibling species differently distributed around a CO2 vent show transplantation proteomic remodelling, while displaying metabolomic signatures associated with their origin. Scientific Reports, 15(1), 33604, https://doi.org/10.1038/s41598-025-18913-y
Related to:
Turner, Lucy M; Madeira, Diana; Ricevuto, Elena; Massa Gallucci, Alexia; Sommer, Ulf; Viant, Mark R; Dineshram, Ramadoss; Gambi, Maria Cristina; Calosi, Piero (2023): Metabolomic profiles of Platynereis spp. collected from inside and outside the CO2 vent (Ischia, Italy) and used in a reciprocal transplant experiment in September 2013 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.953906
Turner, Lucy M; Madeira, Diana; Ricevuto, Elena; Massa Gallucci, Alexia; Sommer, Ulf; Viant, Mark R; Dineshram, Ramadoss; Gambi, Maria Cristina; Calosi, Piero (2023): Proteomic profiles of Platynereis spp. collected from inside and outside the CO2 vent (Ischia, Italy) and used in a reciprocal transplant experiment in September 2013 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.953832
Project(s):
Association of European Marine Biological Laboratories Expanded (ASSEMBLE_Plus)
Funding:
European Commission (EC), grant/award no. 730984: Association of European Marine Biological Laboratories Expanded
Coverage:
Median Latitude: 40.737307 * Median Longitude: 13.955991 * South-bound Latitude: 40.731390 * West-bound Longitude: 13.944170 * North-bound Latitude: 40.746670 * East-bound Longitude: 13.963560
Date/Time Start: 2013-06-04T00:00:00 * Date/Time End: 2013-09-16T00:00:00
Minimum DEPTH, water: 1 m * Maximum DEPTH, water: 2 m
Event(s):
Castello_Aragonese_A1 * Latitude: 40.731390 * Longitude: 13.963060 * Date/Time Start: 2013-06-04T00:00:00 * Date/Time End: 2013-09-16T00:00:00 * Location: Castello Aragonese * Method/Device: Experiment (EXP) * Comment: Acidified site - inside the venting area
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Event label | Event | Calosi, Piero | |||
| 2 | DATE/TIME | Date/Time | Calosi, Piero | Geocode – "T00:00" = unknown sampling time | ||
| 3 | LATITUDE | Latitude | Calosi, Piero | Geocode | ||
| 4 | LONGITUDE | Longitude | Calosi, Piero | Geocode | ||
| 5 | Location | Location | Calosi, Piero | |||
| 6 | Station label | Station | Calosi, Piero | |||
| 7 | DEPTH, water | Depth water | m | Calosi, Piero | Geocode – minimum | |
| 8 | DEPTH, water | Depth water | m | Calosi, Piero | Geocode – maximum | |
| 9 | Salinity | Sal | Calosi, Piero | |||
| 10 | Temperature, water | Temp | °C | Calosi, Piero | pH meter, Mettler Toledo, Beaumont Leys, UK | |
| 11 | pH | pH | Calosi, Piero | pH meter, Mettler Toledo, Beaumont Leys, UK | ||
| 12 | Alkalinity, total | AT | µeq/kg | Calosi, Piero | pH meter, Mettler Toledo, Beaumont Leys, UK | |
| 13 | Carbon, inorganic, dissolved | DIC | µmol/kg | Calosi, Piero | Total Alkalinity Titrator, AS-ALK2, Apollo SciTech, Bogart, USA | |
| 14 | Carbon dioxide, partial pressure | pCO2 | µatm | Calosi, Piero | Total Alkalinity Titrator, AS-ALK2, Apollo SciTech, Bogart, USA | |
| 15 | Bicarbonate ion | [HCO3]- | µmol/kg | Calosi, Piero | Total Alkalinity Titrator, AS-ALK2, Apollo SciTech, Bogart, USA | |
| 16 | Carbonate ion | [CO3]2- | µmol/kg | Calosi, Piero | Total Alkalinity Titrator, AS-ALK2, Apollo SciTech, Bogart, USA | |
| 17 | Calcite saturation state | Omega Cal | Calosi, Piero | Total Alkalinity Titrator, AS-ALK2, Apollo SciTech, Bogart, USA | ||
| 18 | Aragonite saturation state | Omega Arg | Calosi, Piero | Total Alkalinity Titrator, AS-ALK2, Apollo SciTech, Bogart, USA | ||
| 19 | Experiment | Exp | Calosi, Piero | Type | ||
| 20 | Species | Species | Calosi, Piero | |||
| 21 | Genus, unique identification | Genus UID | Calosi, Piero | |||
| 22 | Genus, unique identification (URI) | Genus UID (URI) | Calosi, Piero | |||
| 23 | Genus, unique identification (Semantic URI) | Genus UID (Semantic URI) | Calosi, Piero | |||
| 24 | Method comment | Method comm | Calosi, Piero | Specimen identification |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
3932 data points
Download Data
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