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Olivares-Bañuelos, T N; Gómez-Gutiérrez, C M; García-Echauri, L L; Moreno-Sánchez, E D; Correa-Sandoval, F (2022): Seawater carbonate chemistry and survival, size and gene expression in larvae and post-larvae of the sand dollar Dendraster excentricus [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.953329

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Abstract:
Seawater temperature, oxygen, salinity and pH are important abiotic factors, changes in which can generate stress in marine organisms. Subtidal and intertidal species, such as the sand dollar Dendraster excentricus, are daily exposed to stressors against which they have developed survival mechanisms to face environmental challenges. Analysing the expression of some key genes in response to stress factors due to changes in temperature and pH, especially in the early stages of development, opens a window of knowledge on the effect that these stressors have on benthos marine organisms. In the present work larvae and post-larvae of D. excentricus were exposed to high temperature and low pH scenarios. Survival, size and gene expression of five genes, involved in both stress response (hsp70 IV and hsp90 beta-like) and biomineralization for skeletogenesis (sm29, sm30A, carbonic anhydrase 14-like and mitochondrial proton/calcium exchanger protein LOC575637), were analysed in 4-, 6-, 8-arms, competent larvae and post-larvae. Survival of stressed larvae and post-larvae presented a significant decrease, up to 37% in some stages. A size reduction of almost 30 μm was observed when larvae were exposed to stressful conditions, except in competent larvae and in post-larvae where no significant changes were detected. After stress treatments, transcripts of hsp90 beta-like were up-regulated in all larval stages but hsp70 IV transcripts were not. Under tested stressful conditions sm29 and sm30A expression was down-regulated in larvae and post-larvae, while carbonic anhydrase 14-like and LOC575637 expressions were up-regulated. It is evident that tolerance to changes in seawater temperature and pH has a direct effect on metabolic functions of D. excentricus larvae and post-larvae, which depends on the developmental stage. If laboratory results are extrapolated to marine ecosystems, it is possible that populations of this structuring organism may be disturbed with subsequent damage to ecosystem balance, until resilient organisms acclimatize and adapt to their changing habitats.
Keyword(s):
Animalia; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Dendraster excentricus; Echinodermata; Gene expression (incl. proteomics); Growth/Morphology; Laboratory experiment; Mortality/Survival; North Pacific; Pelagos; Single species; Temperate; Temperature; Zooplankton
Supplement to:
Olivares-Bañuelos, T N; Gómez-Gutiérrez, C M; García-Echauri, L L; Moreno-Sánchez, E D; Correa-Sandoval, F (2022): Temperature and reduced pH regulate stress and biomineralization gene expression in larvae and post-larvae of the sand dollar Dendraster excentricus. Marine Biology Research, 18(3-4), 187-202, https://doi.org/10.1080/17451000.2022.2105894
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
Coverage:
Median Latitude: 31.740000 * Median Longitude: -116.633350 * South-bound Latitude: 31.700000 * West-bound Longitude: -116.650000 * North-bound Latitude: 31.780000 * East-bound Longitude: -116.616700
Date/Time Start: 2013-07-01T00:00:00 * Date/Time End: 2014-10-31T00:00:00
Event(s):
Todos_Santos_Bay * Latitude Start: 31.700000 * Longitude Start: -116.616700 * Latitude End: 31.780000 * Longitude End: -116.650000 * Date/Time Start: 2013-07-01T00:00:00 * Date/Time End: 2014-10-31T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-01-05.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeOlivares-Bañuelos, T NStudy
2Species, unique identificationSpecies UIDOlivares-Bañuelos, T N
3Species, unique identification (URI)Species UID (URI)Olivares-Bañuelos, T N
4Species, unique identification (Semantic URI)Species UID (Semantic URI)Olivares-Bañuelos, T N
5FigureFigOlivares-Bañuelos, T N
6Temperature, waterTemp°COlivares-Bañuelos, T N
7Treatment: pHT:pHOlivares-Bañuelos, T N
8Time in daysTimedaysOlivares-Bañuelos, T Npost-fertilization
9SurvivalSurvival%Olivares-Bañuelos, T N
10Proportion of survival, standard deviationSurvival std dev±Olivares-Bañuelos, T N
11SizeSizeµmOlivares-Bañuelos, T N
12Size, standard deviationSize std dev±Olivares-Bañuelos, T N
13Relative Quantification of geneRQ geneOlivares-Bañuelos, T Nhsp70 IV
14Relative Quantification of gene, standard deviationRQ gene std dev±Olivares-Bañuelos, T Nhsp70 IV
15Relative Quantification of geneRQ geneOlivares-Bañuelos, T Nhsp90 beta-like
16Relative Quantification of gene, standard deviationRQ gene std dev±Olivares-Bañuelos, T Nhsp90 beta-like
17Relative Quantification of geneRQ geneOlivares-Bañuelos, T Nsm29
18Relative Quantification of gene, standard deviationRQ gene std dev±Olivares-Bañuelos, T Nsm29
19Relative Quantification of geneRQ geneOlivares-Bañuelos, T Nsm30A
20Relative Quantification of gene, standard deviationRQ gene std dev±Olivares-Bañuelos, T Nsm30A
21Relative Quantification of geneRQ geneOlivares-Bañuelos, T Ncarbonic anhydrase 14-like
22Relative Quantification of gene, standard deviationRQ gene std dev±Olivares-Bañuelos, T Ncarbonic anhydrase 14-like
23Relative Quantification of geneRQ geneOlivares-Bañuelos, T Nmitochondrial proton/calcium exchanger protein LOC575637
24Relative Quantification of gene, standard deviationRQ gene std dev±Olivares-Bañuelos, T Nmitochondrial proton/calcium exchanger protein LOC575637
25StageStageOlivares-Bañuelos, T N
26PercentagePerc%Olivares-Bañuelos, T Nashes
27Percentage, standard deviationPerc std dev±Olivares-Bañuelos, T Nashes
28SalinitySalOlivares-Bañuelos, T N
29pHpHOlivares-Bañuelos, T NNBS scale
30pH, standard deviationpH std dev±Olivares-Bañuelos, T NNBS scale
31OxygenO2mg/lOlivares-Bañuelos, T N
32Oxygen, standard deviationO2 std dev±Olivares-Bañuelos, T N
33Carbon, inorganic, dissolvedDICµmol/kgOlivares-Bañuelos, T N
34Carbon, inorganic, dissolved, standard deviationDIC std dev±Olivares-Bañuelos, T N
35Alkalinity, totalATµmol/kgOlivares-Bañuelos, T N
36Alkalinity, total, standard deviationAT std dev±Olivares-Bañuelos, T N
37Aragonite saturation stateOmega ArgOlivares-Bañuelos, T NCalculated using CO2SYS
38Aragonite saturation state, standard deviationOmega Arg std dev±Olivares-Bañuelos, T NCalculated using CO2SYS
39Calcite saturation stateOmega CalOlivares-Bañuelos, T NCalculated using CO2SYS
40Calcite saturation state, standard deviationOmega Cal std dev±Olivares-Bañuelos, T NCalculated using CO2SYS
41Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
43Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
44Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
46Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
47Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
48Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
49Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
5520 data points

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