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Laws, Edward A; McClellan, S Alex (2022): Seawater carbonate chemistry and growth and physiology of the marine cyanobacterium Synechococcus (Cyanophyceae) [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.952426

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Abstract:
The marine cyanobacterium Synechococcus elongatus was grown in a continuous culture system to study the interactive effects of temperature, irradiance, nutrient limitation, and the partial pressure of CO2 (pCO2) on its growth and physiological characteristics. Cells were grown on a 14:10 h light:dark cycle at all combinations of low and high irradiance (50 and 300 μmol photons/m**2/s, respectively), low and high pCO2 (400 and 1000 ppmv, respectively), nutrient limitation (nitrate-limited and nutrient-replete conditions), and temperatures of 20–45°C in 5°C increments. The maximum growth rate was ~4.5 · d−1 at 30–35°C. Under nutrient-replete conditions, growth rates at most temperatures and irradiances were about 8% slower at a pCO2 of 1000 ppmv versus 400 ppmv. The single exception was 45°C and high irradiance. Under those conditions, growth rates were ~45% higher at 1000 ppmv. Cellular carbon:nitrogen ratios were independent of temperature at a fixed relative growth rate but higher at high irradiance than at low irradiance. Initial slopes of photosynthesis–irradiance curves were higher at all temperatures under nutrient-replete versus nitrate-limited conditions; they were similar at all temperatures under high and low irradiance, except at 20°C, when they were suppressed at high irradiance. A model of phytoplankton growth in which cellular carbon was allocated to structure, storage, or the light or dark reactions of photosynthesis accounted for the general patterns of cell composition and growth rate. Allocation of carbon to the light reactions of photosynthesis was consistently higher at low versus high light and under nutrient-replete versus nitrate-limited conditions.
Keyword(s):
Bacteria; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Cyanobacteria; Growth/Morphology; Laboratory experiment; Laboratory strains; Light; Macro-nutrients; Not applicable; Pelagos; Phytoplankton; Primary production/Photosynthesis; Single species; Synechococcus elongatus; Temperature
Supplement to:
Laws, Edward A; McClellan, S Alex (2022): Interactive effects of CO 2 , temperature, irradiance, and nutrient limitation on the growth and physiology of the marine cyanobacterium Synechococcus (Cyanophyceae). Journal of Phycology, 58(5), 703-718, https://doi.org/10.1111/jpy.13278
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-12-15.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeLaws, Edward AStudy
2Species, unique identificationSpecies UIDLaws, Edward A
3Species, unique identification (URI)Species UID (URI)Laws, Edward A
4Species, unique identification (Semantic URI)Species UID (Semantic URI)Laws, Edward A
5Temperature, waterTemp°CLaws, Edward A
6TreatmentTreatLaws, Edward ALimiting
7IrradianceEµmol/m2/sLaws, Edward A
8Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetppmvLaws, Edward A
9Growth rateµ1/dayLaws, Edward A
10RatioRatioLaws, Edward Athe nutrient-limited growth rate to the nutrient-replete growth rate under otherwise identical conditions
11Photosynthetic carbon fixation rate, per chlorophyll aC fix/Chl aµg/µg/hLaws, Edward Amean of the Productivity-Irradiance curve
12Photosynthetic carbon fixation rate, per chlorophyll aC fix/Chl aµg/µg/hLaws, Edward Amaximum
13Initial slope of the photosynthesis-irradiance curvealpha(mol C/g Chl a)/(mol quanta/m2)Laws, Edward A
14Carbon/Nitrogen ratioC/NLaws, Edward A
15Carbon/Chlorophyll a ratioC/Chl aLaws, Edward A
16SalinitySalLaws, Edward A
17Alkalinity, totalATµmol/lLaws, Edward A
18pHpHLaws, Edward Atotal scale
19Carbon dioxide, dissolvedCO2 dissµmol/lLaws, Edward A
20Bicarbonate[HCO3]-mmol/lLaws, Edward A
21Carbonate ion[CO3]2-µmol/lLaws, Edward A
22Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
23Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
24Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
25Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
26Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
27Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1392 data points

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