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Frommel, Andrea Y; Lye, Sadie L R; Brauner, Colin J; Hunt, Brian P V (2022): Seawater carbonate chemistry and embryonic and larval development and survival of intertidally spawning fish [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.949832

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Abstract:
Ocean acidification can negatively impact the early life-stages of marine fish, due to energetic costs incurred by the maintenance of acid–base homeostasis, leaving less energy available for growth and development. The embryos of intertidally spawning fishes, such as Pacific herring, are often air exposed for hours. We hypothesized that air exposure would be beneficial to the developing embryo due to a higher oxygen availability (and thus reduced metabolic costs to secure adequate oxygen) and permitting excess CO2 associated with ocean acidification to be off-gassed during emersion. To investigate this, we reared Pacific herring (Clupea pallasii) embryos under three tidal regimes (subtidal: fully immersed, low intertidal: 2 * 2 h air exposure, and high intertidal: 5 + 9 h air exposure) fully crossed with three aquatic CO2 levels (400, 1500 and 3200 µatm) at a water temperature of 9.5 °C and naturally fluctuating air temperature during air exposure. We measured the effects on embryonic development and hatch, as well as carry-over effects on larval development and survival. Air exposure during embryonic development had significant positive effects on growth, condition and survival in larval Pacific herring, with some interactive effects with CO2. Interestingly, CO2 by itself in the fully immersed treatment had no effect, but had significant interactions with air exposure. Our research suggests that air exposure during low tide can be highly beneficial to intertidally spawning fishes and needs to be taken into account in climate change studies and modeling.
Keyword(s):
Animalia; Chordata; Clupea pallasii; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Development; Growth/Morphology; Laboratory experiment; Mortality/Survival; Nekton; North Pacific; Other studied parameter or process; Pelagos; Reproduction; Single species; Temperate
Supplement to:
Frommel, Andrea Y; Lye, Sadie L R; Brauner, Colin J; Hunt, Brian P V (2022): Air exposure moderates ocean acidification effects during embryonic development of intertidally spawning fish. Scientific Reports, 12(1), 12270, https://doi.org/10.1038/s41598-022-16399-6
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-10-18.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeFrommel, Andrea YStudy
2Species, unique identificationSpecies UIDFrommel, Andrea Y
3TreatmentTreatFrommel, Andrea Y
4TreatmentTreatFrommel, Andrea YTide
5IdentificationIDFrommel, Andrea YBox
6IdentificationIDFrommel, Andrea Yembryo
7Time in secondsTimesFrommel, Andrea Y
8Numbern#Frommel, Andrea Yheart beats
9Heart rateheart ratebeat/minFrommel, Andrea Y
10DateDateFrommel, Andrea Y
11IdentificationIDFrommel, Andrea YTank
12Numbern#Frommel, Andrea YImage
13EmbryosEmbryos#Frommel, Andrea Y
14Eggs, diameterEggs diammmFrommel, Andrea Y
15Yolk sac areaYolk sac amm2Frommel, Andrea Y
16Eggs, diameterEggs diammmFrommel, Andrea Yeye
17Time of dayTime of dayFrommel, Andrea Ypost fertilization
18Numbern#Frommel, Andrea Ycap
19Fish larvae, lengthFish larv lmmFrommel, Andrea Y
20Eggs, diameterEggs diammmFrommel, Andrea Yeye
21Yolk sac areaYolk sac amm2Frommel, Andrea Y
22CommentCommentFrommel, Andrea Ycranial abnormalities
23DistanceDistmmFrommel, Andrea Ybetween eyes
24DistanceDistmmFrommel, Andrea Ysnout to base of otocyst
25DistanceDistmmFrommel, Andrea Ysnout to begin of otocyst
26DistanceDistmmFrommel, Andrea Yupper jaw to neck
27DistanceDistmmFrommel, Andrea Ybetween myomere 1
28DistanceDistmmFrommel, Andrea Ybetween myomere 2
29DistanceDistmmFrommel, Andrea Ybetween myomere 3
30ReplicateReplFrommel, Andrea Y
31LengthlmmFrommel, Andrea Y
32Wet massWet mmgFrommel, Andrea Y
33Individual dry massInd dmmgFrommel, Andrea Y
34EggsEggs#Frommel, Andrea Y
35EggsEggs#Frommel, Andrea YDead
36EggsEggs#Frommel, Andrea YSample
37PercentagePerc%Frommel, Andrea YDead Eggs
38PercentagePerc%Frommel, Andrea YHatched
39PercentagePerc%Frommel, Andrea YDead Larvae
40Temperature, waterTemp°CFrommel, Andrea YDay 1
41SalinitySalFrommel, Andrea YDay 1
42Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmFrommel, Andrea YDay 1
43Carbon, inorganic, dissolvedDICµmol/kgFrommel, Andrea YDay 1
44Temperature, waterTemp°CFrommel, Andrea YDay 15
45SalinitySalFrommel, Andrea YDay 15
46Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmFrommel, Andrea YDay 15
47Carbon, inorganic, dissolvedDICµmol/kgFrommel, Andrea YDay 15
48Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
49pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale, Day 1
50Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Day 1
51Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)Day 1
52Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Day 1
53Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Day 1
54Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Day 1
55Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Day 1
56Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)Day 1
57pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale, Day 15
58Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Day 15
59Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)Day 15
60Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Day 15
61Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Day 15
62Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Day 15
63Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Day 15
64Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)Day 15
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
73103 data points

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