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Cai, Ting; Feng, Yuanyuan; Wang, Yanan; Li, Tongtong; Wang, Jiancai; Li, Wei; Zhou, Weihua (2022): Seawater carbonate chemistry and physiological parameters of Thalassiosira sp. and Nitzschia closterium f.minutissima [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.946525

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Abstract:
Marine diatoms are one of the marine phytoplankton functional groups, with high species diversity, playing important roles in the marine food web and carbon sequestration. In order to evaluate the species-specific responses of coastal diatoms to the combined effects of future ocean acidification (OA) and warming on the coastal diatoms, we conducted a semi-continuous incubation on the large centric diatom Thalassiosira sp. (~30 μm) and small pennate diatom Nitzschia closterium f.minutissima (~15 μm). A full factorial combination of two temperature levels (15 and 20°C) and pCO2 (400 and 1,000 ppm) was examined. The results suggest that changes in temperature played a more important role in regulating the physiology of Thalassiosira sp. and N. closterium f.minutissima than CO2. For Thalassiosira sp., elevated temperature significantly reduced the cellular particulate organic carbon (POC), particulate organic nitrogen (PON), particulate organic phosphate (POP), biogenic silica (BSi), chlorophyll a (Chl a), and protein contents, and the C:N ratio. CO2 only had significant effects on the growth rate and the protein content. However, for the smaller pennate diatom N. closterium f.minutissima, the growth rate, POC production rate, and the C:P ratio significantly increased with an elevated temperature, whereas the cellular POP and BSi contents significantly decreased. CO2 had significant effects on the POC production rate, cellular BSi, POC, and PON contents, the C:P, Si:C, N:P, and Si:P ratios, and sinking rate. The interaction between OA and warming showed mostly antagonistic effects on the physiology of both species. Overall, by comparison between the two species, CO2 played a more significant role in regulating the growth rate and sinking rate of the large centric diatom Thalassiosira sp., whereas had more significant effects on the elemental compositions of the smaller pennate diatom N. closterium f.minutissima. These results suggest differential sensitivities of different diatom species with different sizes and morphology to the changes in CO2/temperature regimes and their interactions.
Keyword(s):
Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Chromista; Coast and continental shelf; Growth/Morphology; Laboratory experiment; Nitzschia closterium f.minutissima; North Pacific; Ochrophyta; Other studied parameter or process; Pelagos; Phytoplankton; Single species; Temperate; Temperature; Thalassiosira sp.
Supplement to:
Cai, Ting; Feng, Yuanyuan; Wang, Yanan; Li, Tongtong; Wang, Jiancai; Li, Wei; Zhou, Weihua (2022): The Differential Responses of Coastal Diatoms to Ocean Acidification and Warming: A Comparison Between Thalassiosira sp. and Nitzschia closterium f.minutissima. Frontiers in Microbiology, 13, https://doi.org/10.3389/fmicb.2022.851149
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
Coverage:
Latitude: 38.651850 * Longitude: 118.967500
Date/Time Start: 2019-08-01T00:00:00 * Date/Time End: 2019-08-31T00:00:00
Event(s):
Beidou * Latitude: 38.651850 * Longitude: 118.967500 * Date/Time Start: 2019-08-01T00:00:00 * Date/Time End: 2019-08-31T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-07-22.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
TypeTypeFeng, YuanyuanStudy
SpeciesSpeciesFeng, Yuanyuan
TreatmentTreatFeng, Yuanyuan
Growth rateµ1/dayFeng, Yuanyuan
Carbon, organic, particulate, production per cellPOC prod/cellpg/#/hFeng, Yuanyuan
Carbon, organic, dissolvedDOCmg/lFeng, Yuanyuan
Cell sizeCell sizeµmFeng, Yuanyuan
Chlorophyll a per cellChl a/cellpg/#Feng, Yuanyuan
Phosphorus, organic, particulate, per cellPOP/cellpg/#Feng, Yuanyuan
10 Biogenic silica, per cellbSiO2/cellµg/#Feng, Yuanyuan
11 Carbon, organic, particulate, per cellPOC/cellpg/#Feng, Yuanyuan
12 Nitrogen, organic, particulate, per cellPON/cellpg/#Feng, Yuanyuan
13 Carbon/Nitrogen ratioC/NFeng, Yuanyuan
14 Carbon/Phosphorus ratioC/PFeng, Yuanyuan
15 Carbon/Silicon ratioC/SiFeng, Yuanyuan
16 Nitrogen/Phosphorus ratioN/PFeng, Yuanyuan
17 Silicon/Phosphorus ratioSi/PFeng, Yuanyuan
18 Protein per cellProtein/cellpg/#Feng, Yuanyuan
19 Carbohydrates, per cellCHO/cellpg/#Feng, Yuanyuan
20 Sinking velocitySinking Vm/dayFeng, Yuanyuan
21 SalinitySalFeng, Yuanyuan
22 Temperature, waterTemp°CFeng, Yuanyuan
23 pHpHFeng, YuanyuanNBS scale
24 pH, standard deviationpH std dev±Feng, YuanyuanNBS scale
25 Alkalinity, totalATµmol/kgFeng, Yuanyuan
26 Alkalinity, total, standard deviationAT std dev±Feng, Yuanyuan
27 Carbon, inorganic, dissolvedDICµmol/kgFeng, Yuanyuan
28 Carbon, inorganic, dissolved, standard deviationDIC std dev±Feng, Yuanyuan
29 Bicarbonate ion[HCO3]-µmol/kgFeng, Yuanyuan
30 Bicarbonate ion, standard deviation[HCO3]- std dev±Feng, Yuanyuan
31 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmFeng, Yuanyuan
32 Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Feng, Yuanyuan
33 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
35 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
38 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
983 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Type
(Study)

Species

Treat

µ [1/day]

POC prod/cell [pg/#/h]

DOC [mg/l]

Cell size [µm]

Chl a/cell [pg/#]

POP/cell [pg/#]
10 
bSiO2/cell [µg/#]
11 
POC/cell [pg/#]
12 
PON/cell [pg/#]
13 
C/N
14 
C/P
15 
C/Si
16 
N/P
17 
Si/P
18 
Protein/cell [pg/#]
19 
CHO/cell [pg/#]
20 
Sinking V [m/day]
21 
Sal
22 
Temp [°C]
23 
pH
(NBS scale)
24 
pH std dev [±]
(NBS scale)
25 
AT [µmol/kg]
26 
AT std dev [±]
27 
DIC [µmol/kg]
28 
DIC std dev [±]
29 
[HCO3]- [µmol/kg]
30 
[HCO3]- std dev [±]
31 
pCO2water_SST_wet [µatm]
32 
pCO2 std dev [±]
33 
CSC flag
34 
pH
(total scale)
35 
CO2 [µmol/kg]
36 
fCO2water_SST_wet [µatm]
37 
pCO2water_SST_wet [µatm]
38 
[HCO3]- [µmol/kg]
39 
[CO3]2- [µmol/kg]
40 
DIC [µmol/kg]
41 
Omega Arg
42 
Omega Cal
laboratoryThalassiosira sp.400ppm-15°C1.32628.0827.3540.5471.2440.0000140734.2369.4074.24471.0485.67216.74012.5250.8573.4840.04034.78158.180.0092525.113.082220.104.082006.606.43429.88.38268.0715.64416.92418.432087.52179.752282.902.764.29
laboratoryThalassiosira sp.400ppm-20°C1.6381.23428.8726.9280.2970.7240.0000075518.0813.9345.35964.4755.58112.03111.5520.6753.3560.05734.78208.230.0022509.57.132187.111.231954.211.95368.22.06268.1112.03370.87372.131966.17224.002202.203.495.37
laboratoryThalassiosira sp.1000ppm-15°C1.5211.48230.3327.3230.4540.8430.0000100723.3806.8763.96571.5815.41118.05313.2290.6864.0850.03134.78157.890.0202523.522.982359.4010.302215.3014.29916.457.25267.7833.29887.51890.732278.52100.602412.401.542.40
laboratoryThalassiosira sp.1000ppm-20°C1.6161.11931.5131.1410.3520.6730.0000068016.6184.6824.13963.7255.69915.39611.1820.6093.0250.03334.78207.940.0092511.115.532339.704.032187.705.74811.919.62267.8226.26809.46812.222199.77128.472354.502.003.08
laboratoryThalassiosira sp.400ppm-15°C1.2801.36126.9228.8750.4460.9090.0000114725.5317.0194.24272.4755.18817.08613.9690.9342.7330.03234.78158.180.0092525.113.082220.104.082006.606.43429.88.38268.0715.64416.92418.432087.52179.752282.902.764.29
laboratoryThalassiosira sp.400ppm-20°C1.6651.41428.3329.7500.3590.7110.0000093320.3894.8414.91174.0565.09515.07914.5350.7013.0170.05434.78208.230.0022509.57.132187.111.231954.211.95368.22.06268.1112.03370.87372.131966.17224.002202.203.495.37
laboratoryThalassiosira sp.1000ppm-15°C1.4391.51832.6527.4610.5850.9380.0000104925.3208.9993.28169.6925.63021.24012.3800.7403.1330.02834.78157.890.0202523.522.982359.4010.302215.3014.29916.457.25267.7833.29887.51890.732278.52100.602412.401.542.40
laboratoryThalassiosira sp.1000ppm-20°C1.6471.41631.1827.0560.3880.7320.0000089820.6314.6445.18172.7325.35714.03913.5770.9483.9510.02834.78207.940.0092511.115.532339.704.032187.705.74811.919.62267.8226.26809.46812.222199.77128.472354.502.003.08
laboratoryThalassiosira sp.400ppm-15°C1.3151.26627.9728.9330.4610.9410.0000106523.1026.1144.40763.3435.05614.37512.5270.9212.62734.78158.180.0092525.113.082220.104.082006.606.43429.88.38268.0715.64416.92418.432087.52179.752282.902.764.29
laboratoryThalassiosira sp.400ppm-20°C1.40828.3326.2570.3540.7300.0000085719.7244.3035.34569.7275.36513.04512.9980.9810.04734.78208.230.0022509.57.132187.111.231954.211.95368.22.06268.1112.03370.87372.131966.17224.002202.203.495.37
laboratoryThalassiosira sp.1000ppm-15°C1.4941.36531.5230.3810.4140.7480.0000094621.9335.4704.67675.6885.40516.18614.0030.8513.2450.03134.78157.890.0202523.522.982359.4010.302215.3014.29916.457.25267.7833.29887.51890.732278.52100.602412.401.542.40
laboratoryThalassiosira sp.1000ppm-20°C1.23030.5427.1570.3370.7340.0000083918.6475.4334.00265.5515.18016.37812.6540.6292.5460.02034.78207.940.0092511.115.532339.704.032187.705.74811.919.62267.8226.26809.46812.222199.77128.472354.502.003.08
laboratoryNitzschia closterium f.minutissima400ppm-15°C0.9200.44917.0990.2050.3600.0000010411.7113.8733.52784.04826.30723.8323.1951.92113.1390.21634.78158.180.0092525.113.082220.104.082006.606.43429.88.38268.0715.64416.92418.432087.52179.752282.902.764.29
laboratoryNitzschia closterium f.minutissima400ppm-20°C1.1720.48325.8516.2300.1750.3000.000000819.8963.2083.59785.24728.64423.6972.9761.5127.4230.21634.78208.230.0022509.57.132187.111.231954.211.95368.22.06268.1112.03370.87372.131966.17224.002202.203.495.37
laboratoryNitzschia closterium f.minutissima1000ppm-15°C0.9050.40227.0515.4300.1340.2890.0000006910.6644.1622.6301.62510.2160.17634.78157.890.0202523.522.982359.4010.302215.3014.29916.457.25267.7833.29887.51890.732278.52100.602412.401.542.40
laboratoryNitzschia closterium f.minutissima1000ppm-20°C1.1801.13214.0250.1310.2700.0000003523.0208.1033.313220.250154.34866.4821.4271.34111.8350.28734.78207.940.0092511.115.532339.704.032187.705.74811.919.62267.8226.26809.46812.222199.77128.472354.502.003.08
laboratoryNitzschia closterium f.minutissima400ppm-15°C0.8760.40426.0916.0850.1850.3500.0000009611.0593.2503.96881.58226.76320.5613.0481.8418.4350.27034.78158.180.0092525.113.082220.104.082006.606.43429.88.38268.0715.64416.92418.432087.52179.752282.902.764.29
laboratoryNitzschia closterium f.minutissima400ppm-20°C1.2360.44025.8215.5010.1370.2340.000000658.5532.0294.91594.32530.83219.1913.0591.5150.27034.78208.230.0022509.57.132187.111.231954.211.95368.22.06268.1112.03370.87372.131966.17224.002202.203.495.37
laboratoryNitzschia closterium f.minutissima1000ppm-15°C0.9350.74527.8815.5240.1600.3240.0000006319.1106.5013.428152.21671.05844.4042.1421.59710.2570.16434.78157.890.0202523.522.982359.4010.302215.3014.29916.457.25267.7833.29887.51890.732278.52100.602412.401.542.40
laboratoryNitzschia closterium f.minutissima1000ppm-20°C1.1981.46127.7915.0100.2980.0000005329.266253.464128.1071.9791.45811.5670.30434.78207.940.0092511.115.532339.704.032187.705.74811.919.62267.8226.26809.46812.222199.77128.472354.502.003.08
laboratoryNitzschia closterium f.minutissima400ppm-15°C0.8960.45025.8914.7920.1420.5020.0000010012.0613.3084.25261.99728.0782.2081.85311.9710.26034.78158.180.0092525.113.082220.104.082006.606.43429.88.38268.0715.64416.92418.432087.52179.752282.902.764.29
laboratoryNitzschia closterium f.minutissima400ppm-20°C1.2010.70224.3215.5210.3390.0000009614.0194.4283.692106.70933.94028.8993.1441.57612.3290.26034.78208.230.0022509.57.132187.111.231954.211.95368.22.06268.1112.03370.87372.131966.17224.002202.203.495.37
laboratoryNitzschia closterium f.minutissima1000ppm-15°C0.9520.86627.3515.4240.1520.2770.0000006921.8396.4743.934203.41173.73951.7092.7591.44211.9010.20334.78157.890.0202523.522.982359.4010.302215.3014.29916.457.25267.7833.29887.51890.732278.52100.602412.401.542.40
laboratoryNitzschia closterium f.minutissima1000ppm-20°C1.22427.2415.3410.1310.2150.000000452.3331.54212.0210.27634.78207.940.0092511.115.532339.704.032187.705.74811.919.62267.8226.26809.46812.222199.77128.472354.502.003.08