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Liu, Pi-Jen; Chang, Hong-Fong; Mayfield, Anderson B; Lin, Hsing-Juh (2022): Seawater carbonate chemistry and the physiological response variables of the high and ambient (i.e., control) CO2 mesocosms at different temperatures [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.946381

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Abstract:
Seagrass beds serve as important carbon sinks, and it is thought that increasing the quantity and quality of such sinks could help to slow the rate of global climate change. Therefore, it will be important to (1) gain a better understanding of seagrass bed metabolism and (2) document how these high-productivity ecosystems are impacted by climate change-associated factors, such as ocean acidification (OA) and ocean warming (OW). A mesocosm-based approach was taken herein in which a tropical, Western Pacific seagrass species Thalassia hemprichii was cultured under either control or OA-simulating conditions; the temperature was gradually increased from 25 to 31 °C for both CO2 enrichment treatments, and it was hypothesized that this species would respond positively to OA and elevated temperature. After 12 weeks of exposure, OA (~1200 ppm) led to (1) increases in underground biomass and root C:N ratios and (2) decreases in root nitrogen content. Rising temperatures (25 to 31 °C) increased the maximum quantum yield of photosystem II (Fv:Fm), productivity, leaf growth rate, decomposition rate, and carbon sequestration, but decreased the rate of shoot density increase and the carbon content of the leaves; this indicates that warming alone does not increase the short-term carbon sink capacity of this seagrass species. Under high CO2 and the highest temperature employed (31 °C), this seagrass demonstrated its highest productivity, Fv:Fm, leaf growth rate, and carbon sequestration. Collectively, then, it appears that high CO2 levels offset the negative effects of high temperature on this seagrass species. Whether this pattern is maintained at temperatures that actually induce marked seagrass stress (likely beginning at 33–34 °C in Southern Taiwan) should be the focus of future research.
Keyword(s):
Animalia; Benthic animals; Benthos; Biomass/Abundance/Elemental composition; Cnidaria; Coast and continental shelf; Growth/Morphology; Laboratory experiment; Mesocosm or benthocosm; North Pacific; Primary production/Photosynthesis; Single species; Temperature; Thalassia hemprichii; Tropical
Supplement to:
Liu, Pi-Jen; Chang, Hong-Fong; Mayfield, Anderson B; Lin, Hsing-Juh (2022): Assessing the Effects of Ocean Warming and Acidification on the Seagrass Thalassia hemprichii. Journal of Marine Science and Engineering, 10(6), 714, https://doi.org/10.3390/jmse10060714
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
Coverage:
Latitude: 21.950000 * Longitude: 120.730000
Date/Time Start: 2014-04-15T00:00:00 * Date/Time End: 2014-04-15T00:00:00
Event(s):
Dakwan * Latitude: 21.950000 * Longitude: 120.730000 * Date/Time: 2014-04-15T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-07-15.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
TypeTypeLiu, Pi-JenStudy
Species, unique identificationSpecies UIDLiu, Pi-Jen
Species, unique identification (URI)Species UID (URI)Liu, Pi-Jen
Species, unique identification (Semantic URI)Species UID (Semantic URI)Liu, Pi-Jen
Treatment: temperatureT:temp°CLiu, Pi-Jen
TreatmentTreatLiu, Pi-Jen
Maximum photochemical quantum yield of photosystem IIFv/FmLiu, Pi-Jen
Maximum photochemical quantum yield of photosystem II, standard deviationFv/Fm std dev±Liu, Pi-Jen
Seagrass productivity, per shootSeagr prod dm/shootmg/#/dayLiu, Pi-Jen
10 Seagrass productivity, per shoot, standard deviationSeagr prod dm/shoot std dev±Liu, Pi-Jen
11 Growth rateµmg/g/dayLiu, Pi-JenRelative
12 Growth rate, standard deviationµ std dev±Liu, Pi-JenRelative
13 Leaf growth rate, per shootLeaf growth rate/shootmm/#/dayLiu, Pi-Jen
14 Growth rate, standard deviationµ std dev±Liu, Pi-Jen
15 Shoot densityShoot den#/m2Liu, Pi-Jen
16 Shoot density, standard deviationShoot den±Liu, Pi-Jen
17 Shoot density increase rateShoot dens incr%/weekLiu, Pi-Jen
18 Shoot density increase rate, standard deviationShoot dens incr std dev±Liu, Pi-Jen
19 Biomass, dry massBiom dmgLiu, Pi-JenAboveground
20 Biomass, dry mass, standard deviationBiom dm std dev±Liu, Pi-JenAboveground
21 Biomass, dry massBiom dmgLiu, Pi-JenUnderground
22 Biomass, dry mass, standard deviationBiom dm std dev±Liu, Pi-JenUnderground
23 RatioRatioLiu, Pi-JenUnderground/ aboveground
24 RatioRatioLiu, Pi-JenUnderground/ aboveground
25 Decomposition rateDecomp%/dayLiu, Pi-JenAboveground
26 Decomposition rate, standard deviationDecomp std dev±Liu, Pi-JenAboveground
27 Decomposition rateDecomp%/dayLiu, Pi-JenUnderground
28 Decomposition rate, standard deviationDecomp std dev±Liu, Pi-JenUnderground
29 CarbonC%Liu, Pi-JenRoot
30 Carbon, standard deviationC std dev±Liu, Pi-JenRoot
31 NitrogenN%Liu, Pi-JenRoot
32 Nitrogen, standard deviationN std dev±Liu, Pi-JenRoot
33 Carbon/Nitrogen ratioC/NLiu, Pi-JenRoot
34 Carbon/Nitrogen ratio, standard deviationC/N std dev±Liu, Pi-JenRoot
35 CarbonC%Liu, Pi-JenRhizome
36 Carbon, standard deviationC std dev±Liu, Pi-JenRhizome
37 NitrogenN%Liu, Pi-JenRhizome
38 Nitrogen, standard deviationN std dev±Liu, Pi-JenRhizome
39 Carbon/Nitrogen ratioC/NLiu, Pi-JenRhizome
40 Carbon/Nitrogen ratio, standard deviationC/N std dev±Liu, Pi-JenRhizome
41 CarbonC%Liu, Pi-JenLeaf
42 Carbon, standard deviationC std dev±Liu, Pi-JenLeaf
43 NitrogenN%Liu, Pi-JenLeaf
44 Nitrogen, standard deviationN std dev±Liu, Pi-JenLeaf
45 Carbon/Nitrogen ratioC/NLiu, Pi-JenLeaf
46 Carbon/Nitrogen ratio, standard deviationC/N std dev±Liu, Pi-JenLeaf
47 Carbon sequestration, per shootC seq/shootmg/#/dayLiu, Pi-Jen
48 Carbon sequestration, per shoot, standard deviationC seq/shoot std dev±Liu, Pi-Jen
49 Carbon, per shootC/shootg/#Liu, Pi-Jen
50 Carbon, per shoot, standard deviationC/shoot std dev±Liu, Pi-Jen
51 pHpHLiu, Pi-JenPotentiometricAquaController, NBS scale
52 pH, standard deviationpH std dev±Liu, Pi-JenPotentiometricAquaController, NBS scale
53 Temperature, waterTemp°CLiu, Pi-JenAquaController
54 Temperature, water, standard deviationTemp std dev±Liu, Pi-JenAquaController
55 Temperature, waterTemp°CLiu, Pi-JenHOBO
56 Temperature, water, standard deviationTemp std dev±Liu, Pi-JenHOBO
57 IrradianceEµmol/m2/sLiu, Pi-Jen
58 Irradiance, standard deviationE std dev±Liu, Pi-Jen
59 pHpHLiu, Pi-JenPotentiometricYSI, NBS scale
60 pH, standard deviationpH std dev±Liu, Pi-JenPotentiometricYSI, NBS scale
61 Temperature, waterTemp°CLiu, Pi-JenYSI
62 Temperature, water, standard deviationTemp std dev±Liu, Pi-JenYSI
63 Oxygen, dissolvedDOmg/lLiu, Pi-JenYSI
64 Oxygen, dissolved, standard deviationDO std dev±Liu, Pi-JenYSI
65 SalinitySalLiu, Pi-JenYSI
66 Salinity, standard deviationSal std dev±Liu, Pi-JenYSI
67 Alkalinity, totalATµmol/kgLiu, Pi-JenPotentiometric titration
68 Alkalinity, total, standard deviationAT std dev±Liu, Pi-JenPotentiometric titration
69 Carbon dioxideCO2µmol/kgLiu, Pi-JenCalculated using CO2SYS
70 Carbon dioxide, standard deviationCO2 std dev±Liu, Pi-JenCalculated using CO2SYS
71 Bicarbonate ion[HCO3]-µmol/kgLiu, Pi-JenCalculated using CO2SYS
72 Bicarbonate ion, standard deviation[HCO3]- std dev±Liu, Pi-JenCalculated using CO2SYS
73 Aragonite saturation stateOmega ArgLiu, Pi-JenCalculated using CO2SYS
74 Aragonite saturation state, standard deviationOmega Arg std dev±Liu, Pi-JenCalculated using CO2SYS
75 Phosphate[PO4]3-mg/lLiu, Pi-Jen
76 Phosphate, standard deviation[PO4]3- std dev±Liu, Pi-Jen
77 Ammonium[NH4]+mg/lLiu, Pi-Jen
78 Ammonium, standard deviation[NH4]+ std dev±Liu, Pi-Jen
79 Nitrite[NO2]-mg/lLiu, Pi-Jen
80 Nitrite, standard deviation[NO2]- std dev±Liu, Pi-Jen
81 Nitrate[NO3]-mg/lLiu, Pi-Jen
82 Nitrate, standard deviationNO3 std dev±Liu, Pi-Jen
83 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
84 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
85 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
86 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
87 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
88 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
89 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
90 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
91 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
92 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
540 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Type
(Study)

Species UID

Species UID (URI)

Species UID (Semantic URI)

T:temp [°C]

Treat

Fv/Fm

Fv/Fm std dev [±]

Seagr prod dm/shoot [mg/#/day]
10 
Seagr prod dm/shoot std dev [±]
11 
µ [mg/g/day]
(Relative)
12 
µ std dev [±]
(Relative)
13 
Leaf growth rate/shoot [mm/#/day]
14 
µ std dev [±]
15 
Shoot den [#/m2]
16 
Shoot den [±]
17 
Shoot dens incr [%/week]
18 
Shoot dens incr std dev [±]
19 
Biom dm [g]
(Aboveground)
20 
Biom dm std dev [±]
(Aboveground)
21 
Biom dm [g]
(Underground)
22 
Biom dm std dev [±]
(Underground)
23 
Ratio
(Underground/ aboveground)
24 
Ratio
(Underground/ aboveground)
25 
Decomp [%/day]
(Aboveground)
26 
Decomp std dev [±]
(Aboveground)
27 
Decomp [%/day]
(Underground)
28 
Decomp std dev [±]
(Underground)
29 
C [%]
(Root)
30 
C std dev [±]
(Root)
31 
N [%]
(Root)
32 
N std dev [±]
(Root)
33 
C/N
(Root)
34 
C/N std dev [±]
(Root)
35 
C [%]
(Rhizome)
36 
C std dev [±]
(Rhizome)
37 
N [%]
(Rhizome)
38 
N std dev [±]
(Rhizome)
39 
C/N
(Rhizome)
40 
C/N std dev [±]
(Rhizome)
41 
C [%]
(Leaf)
42 
C std dev [±]
(Leaf)
43 
N [%]
(Leaf)
44 
N std dev [±]
(Leaf)
45 
C/N
(Leaf)
46 
C/N std dev [±]
(Leaf)
47 
C seq/shoot [mg/#/day]
48 
C seq/shoot std dev [±]
49 
C/shoot [g/#]
50 
C/shoot std dev [±]
51 
pH
(AquaController, NBS scale, Po...)
52 
pH std dev [±]
(AquaController, NBS scale, Po...)
53 
Temp [°C]
(AquaController)
54 
Temp std dev [±]
(AquaController)
55 
Temp [°C]
(HOBO)
56 
Temp std dev [±]
(HOBO)
57 
E [µmol/m2/s]
58 
E std dev [±]
59 
pH
(YSI, NBS scale, Potentiometric)
60 
pH std dev [±]
(YSI, NBS scale, Potentiometric)
61 
Temp [°C]
(YSI)
62 
Temp std dev [±]
(YSI)
63 
DO [mg/l]
(YSI)
64 
DO std dev [±]
(YSI)
65 
Sal
(YSI)
66 
Sal std dev [±]
(YSI)
67 
AT [µmol/kg]
(Potentiometric titration)
68 
AT std dev [±]
(Potentiometric titration)
69 
CO2 [µmol/kg]
(Calculated using CO2SYS)
70 
CO2 std dev [±]
(Calculated using CO2SYS)
71 
[HCO3]- [µmol/kg]
(Calculated using CO2SYS)
72 
[HCO3]- std dev [±]
(Calculated using CO2SYS)
73 
Omega Arg
(Calculated using CO2SYS)
74 
Omega Arg std dev [±]
(Calculated using CO2SYS)
75 
[PO4]3- [mg/l]
76 
[PO4]3- std dev [±]
77 
[NH4]+ [mg/l]
78 
[NH4]+ std dev [±]
79 
[NO2]- [mg/l]
80 
[NO2]- std dev [±]
81 
[NO3]- [mg/l]
82 
NO3 std dev [±]
83 
CSC flag
(Calculated using seacarb afte...)
84 
pH
(total scale, Calculated using...)
85 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
86 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
87 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
88 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
89 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
90 
DIC [µmol/kg]
(Calculated using seacarb afte...)
91 
Omega Arg
(Calculated using seacarb afte...)
92 
Omega Cal
(Calculated using seacarb afte...)
laboratoryThalassia hemprichiimarinespecies.orgurn:lsid:marinespecies.org:taxname:20893125high CO20.7900.900.054.380.353.610.5518201004.191.430.05940.00690.15490.00623.260.591.650.060.460.0634.10.51.40.124.61.334.00.81.50.022.90.434.60.42.20.216.31.10.310.027.300.417.730.0025.100.0025.400.00103.501.507.920.0125.100.006.190.1534.800.002309.00235.001372.00159.002081.00208.001.490.260.020.010.040.010.000.000.000.00267.7823.04812.56815.161989.17130.502142.702.073.15
laboratoryThalassia hemprichiimarinespecies.orgurn:lsid:marinespecies.org:taxname:20893125ambient CO20.7900.760.104.900.893.590.4419202002.280.460.05710.00910.10530.01061.920.321.420.200.280.1133.70.11.50.021.80.233.91.81.40.125.81.233.50.42.10.116.41.10.250.035.350.478.200.0025.100.0025.600.0099.001.808.180.0125.200.006.220.1534.800.002250.00219.00444.0050.001761.00170.003.180.490.020.010.040.010.000.000.010.00268.0411.04390.41391.651736.81207.941955.803.315.02
laboratoryThalassia hemprichiimarinespecies.orgurn:lsid:marinespecies.org:taxname:20893128high CO20.8001.320.106.580.376.930.2419201400.140.580.06460.00270.13760.00592.160.062.120.200.920.1529.21.21.20.126.01.632.70.31.40.023.20.331.70.52.00.115.90.60.430.026.510.267.700.0028.000.0028.300.00101.201.407.610.0128.100.005.920.1634.700.002300.0012.001210.0088.002040.0025.001.710.090.010.000.030.010.000.000.000.00267.4748.231830.051835.712118.3574.422241.001.201.81
laboratoryThalassia hemprichiimarinespecies.orgurn:lsid:marinespecies.org:taxname:20893128ambient CO20.8001.140.037.020.486.850.392010210-0.200.370.05150.00490.11370.00292.360.292.460.121.160.3331.50.31.40.122.71.332.10.21.50.121.61.332.50.12.10.115.60.50.370.015.300.128.220.0028.000.0028.400.0099.101.107.940.0128.200.025.910.1734.800.052204.006.00381.0028.001667.0025.003.500.190.010.000.030.010.010.010.000.00267.8019.75751.48753.801857.97140.282018.002.273.40
laboratoryThalassia hemprichiimarinespecies.orgurn:lsid:marinespecies.org:taxname:20893131high CO20.8001.780.149.400.678.340.331920120-0.070.230.06540.01330.12800.01392.070.272.470.270.880.2132.40.21.30.024.10.334.51.11.40.124.91.233.30.21.90.117.91.40.590.056.550.917.700.0030.800.0031.000.0096.302.007.580.0130.900.005.470.1434.700.002143.0059.001220.00136.001883.0064.001.720.030.050.010.040.010.000.000.020.01267.4346.451880.781886.401969.1870.272085.901.151.72
laboratoryThalassia hemprichiimarinespecies.orgurn:lsid:marinespecies.org:taxname:20893131ambient CO20.8101.630.379.410.268.190.951940160-1.250.790.05980.01620.11350.02331.970.182.580.261.630.3131.90.71.40.122.31.335.45.21.40.125.02.332.20.71.90.116.70.70.530.125.651.268.230.0030.800.0031.100.00100.901.907.920.0231.000.005.460.1534.700.001898.00126.00286.0051.001352.00122.003.490.100.060.000.040.010.000.000.010.00267.7717.06692.34694.401582.97123.871723.902.033.03