Citation:

PANGAEA.946138

Name: Seawater carbonate chemistry and skeletal morphology of massive Porites spp. corals
Published: 2022-07-08
License: https://creativecommons.org/licenses/by/4.0/
Keywords: Animalia; Benthic animals; Benthos; Cnidaria; Containers and aquaria (20-1000 L or < 1 m**2); Growth/Morphology; Laboratory experiment; Laboratory strains; Not applicable; Porites lutea; Porites murrayensis; Single species

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Abstract:

Ocean acidification alters the dissolved inorganic carbon chemistry of seawater and can reduce the calcification rates of tropical corals. Here we explore the effect of altering seawater pCO2 on the skeletal morphology of 4 genotypes of massive Porites spp. which display widely different calcification rates. Increasing seawater pCO2 causes significant changes in in the skeletal morphology of all Porites spp. studied regardless of whether or not calcification was significantly affected by seawater pCO2. Both the median calyx size and the proportion of skeletal surface occupied by the calices decreased significantly at 750 µatm compared to 400 µatm indicating that polyp size shrinks in this genus in response to ocean acidification. The coenosteum, connecting calices, expands to occupy a larger proportion of the coral surface to compensate for this decrease in calyx area. At high seawater pCO2 the spines deposited at the skeletal surface became more numerous and the trabeculae (vertical skeletal pillars) became significantly thinner in 2 of the 4 genotypes. The effect of high seawater pCO2 is most pronounced in the fastest growing coral and the regular placement of trabeculae and synapticulae is disturbed in this genotype resulting in a skeleton that is more randomly organised. The study demonstrates that ocean acidification decreases the polyp size and fundamentally alters the architecture of the skeleton in this major reef building species from the Indo-Pacific Ocean.

Keyword(s):

Animalia; Benthic animals; Benthos; Cnidaria; Containers and aquaria (20-1000 L or < 1 m**2); Growth/Morphology; Laboratory experiment; Laboratory strains; Not applicable; Porites lutea; Porites murrayensis; Single species

Supplement to:

Allison, Nicola; Ross, Phoebe; Brasier, Alex; Cieminska, Nadia; Martin, Nicolas Lopez; Cole, Catherine; Hintz, Chris; Hintz, Ken; Finch, Adrian A (2022): Effects of seawater pCO2 on the skeletal morphology of massive Porites spp. corals. Marine Biology, 169(6), https://doi.org/10.1007/s00227-022-04060-9

Further details:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Comment:

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-07-07.

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Type	Type		Allison, Nicola		Study
2	Species, unique identification	Species UID		Allison, Nicola
3	Species, unique identification (URI)	Species UID (URI)		Allison, Nicola
4	Species, unique identification (Semantic URI)	Species UID (Semantic URI)		Allison, Nicola
5	Genotype	Genotype		Allison, Nicola
6	Treatment: partial pressure of carbon dioxide	T:pCO2	µatm	Allison, Nicola
7	Surface area	SA	mm²	Allison, Nicola		whole calices
8	Percentage	Perc	%	Allison, Nicola		skeletal surface occupied by calices
9	Width	w	mm	Allison, Nicola		Trabecula
10	Width, standard deviation	w std dev	±	Allison, Nicola		Trabecula
11	Replicates	Repl	#	Allison, Nicola
12	Confidence interval	CI		Allison, Nicola		95%
13	Temperature, water	Temp	°C	Allison, Nicola		Experiment 1
14	Temperature, water, standard deviation	Temp std dev	±	Allison, Nicola		Experiment 1
15	Salinity	Sal		Allison, Nicola		Experiment 1
16	Salinity, standard deviation	Sal std dev	±	Allison, Nicola		Experiment 1
17	Calcium	Ca2+	mmol/kg	Allison, Nicola		Experiment 1
18	Calcium ion, standard deviation	Ca2+ std dev	±	Allison, Nicola		Experiment 1
19	Alkalinity, total	AT	µmol/kg	Allison, Nicola		Experiment 1
20	Alkalinity, total, standard deviation	AT std dev	±	Allison, Nicola		Experiment 1
21	Carbon, inorganic, dissolved	DIC	µmol/kg	Allison, Nicola		Experiment 1
22	Carbon, inorganic, dissolved, standard deviation	DIC std dev	±	Allison, Nicola		Experiment 1
23	Boron hydroxide	[B(OH)4]-	µmol/kg	Allison, Nicola		Experiment 1
24	Boron hydroxide, standard deviation	[B(OH)4]- std dev	±	Allison, Nicola		Experiment 1
25	Ammonium	[NH4]+	µmol/l	Allison, Nicola		Experiment 1
26	Ammonium, standard deviation	[NH4]+ std dev	±	Allison, Nicola		Experiment 1
27	Phosphate	[PO4]3-	µmol/l	Allison, Nicola		Experiment 1
28	Phosphate, standard deviation	[PO4]3- std dev	±	Allison, Nicola		Experiment 1
29	Silicate	Si(OH)4	µmol/l	Allison, Nicola		Experiment 1
30	Silicate, standard deviation	Si(OH)4 std dev	±	Allison, Nicola		Experiment 1
31	Nitrate and Nitrite	[NO3]- + [NO2]-	µmol/l	Allison, Nicola		Experiment 1
32	Nitrate and Nitrite, standard deviation	[NO3]- + [NO2]- std dev	±	Allison, Nicola		Experiment 1
33	Temperature, water	Temp	°C	Allison, Nicola		Experiment 2, 25 °C
34	Temperature, water, standard deviation	Temp std dev	±	Allison, Nicola		Experiment 2, 25 °C
35	Salinity	Sal		Allison, Nicola		Experiment 2, 25 °C
36	Salinity, standard deviation	Sal std dev	±	Allison, Nicola		Experiment 2, 25 °C
37	Calcium	Ca2+	mmol/kg	Allison, Nicola		Experiment 2, 25 °C
38	Calcium ion, standard deviation	Ca2+ std dev	±	Allison, Nicola		Experiment 2, 25 °C
39	Alkalinity, total	AT	µmol/kg	Allison, Nicola		Experiment 2, 25 °C
40	Alkalinity, total, standard deviation	AT std dev	±	Allison, Nicola		Experiment 2, 25 °C
41	Carbon, inorganic, dissolved	DIC	µmol/kg	Allison, Nicola		Experiment 2, 25 °C
42	Carbon, inorganic, dissolved, standard deviation	DIC std dev	±	Allison, Nicola		Experiment 2, 25 °C
43	Boron hydroxide	[B(OH)4]-	µmol/kg	Allison, Nicola		Experiment 2, 25 °C
44	Boron hydroxide, standard deviation	[B(OH)4]- std dev	±	Allison, Nicola		Experiment 2, 25 °C
45	Ammonium	[NH4]+	µmol/l	Allison, Nicola		Experiment 2, 25 °C
46	Ammonium, standard deviation	[NH4]+ std dev	±	Allison, Nicola		Experiment 2, 25 °C
47	Phosphate	[PO4]3-	µmol/l	Allison, Nicola		Experiment 2, 25 °C
48	Phosphate, standard deviation	[PO4]3- std dev	±	Allison, Nicola		Experiment 2, 25 °C
49	Silicate	Si(OH)4	µmol/l	Allison, Nicola		Experiment 2, 25 °C
50	Silicate, standard deviation	Si(OH)4 std dev	±	Allison, Nicola		Experiment 2, 25 °C
51	Nitrate and Nitrite	[NO3]- + [NO2]-	µmol/l	Allison, Nicola		Experiment 2, 25 °C
52	Nitrate and Nitrite, standard deviation	[NO3]- + [NO2]- std dev	±	Allison, Nicola		Experiment 2, 25 °C
53	Temperature, water	Temp	°C	Allison, Nicola		Experiment 2, 28 °C
54	Temperature, water, standard deviation	Temp std dev	±	Allison, Nicola		Experiment 2, 28 °C
55	Salinity	Sal		Allison, Nicola		Experiment 2, 28 °C
56	Salinity, standard deviation	Sal std dev	±	Allison, Nicola		Experiment 2, 28 °C
57	Calcium	Ca2+	mmol/kg	Allison, Nicola		Experiment 2, 28 °C
58	Calcium ion, standard deviation	Ca2+ std dev	±	Allison, Nicola		Experiment 2, 28 °C
59	Alkalinity, total	AT	µmol/kg	Allison, Nicola		Experiment 2, 28 °C
60	Alkalinity, total, standard deviation	AT std dev	±	Allison, Nicola		Experiment 2, 28 °C
61	Carbon, inorganic, dissolved	DIC	µmol/kg	Allison, Nicola		Experiment 2, 28 °C
62	Carbon, inorganic, dissolved, standard deviation	DIC std dev	±	Allison, Nicola		Experiment 2, 28 °C
63	Boron hydroxide	[B(OH)4]-	µmol/kg	Allison, Nicola		Experiment 2, 28 °C
64	Boron hydroxide, standard deviation	[B(OH)4]- std dev	±	Allison, Nicola		Experiment 2, 28 °C
65	Ammonium	[NH4]+	µmol/l	Allison, Nicola		Experiment 2, 28 °C
66	Ammonium, standard deviation	[NH4]+ std dev	±	Allison, Nicola		Experiment 2, 28 °C
67	Phosphate	[PO4]3-	µmol/l	Allison, Nicola		Experiment 2, 28 °C
68	Phosphate, standard deviation	[PO4]3- std dev	±	Allison, Nicola		Experiment 2, 28 °C
69	Silicate	Si(OH)4	µmol/l	Allison, Nicola		Experiment 2, 28 °C
70	Silicate, standard deviation	Si(OH)4 std dev	±	Allison, Nicola		Experiment 2, 28 °C
71	Nitrate and Nitrite	[NO3]- + [NO2]-	µmol/l	Allison, Nicola		Experiment 2, 28 °C
72	Nitrate and Nitrite, standard deviation	[NO3]- + [NO2]- std dev	±	Allison, Nicola		Experiment 2, 28 °C
73	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
74	pH	pH		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 1, total scale
75	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 1
76	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 1
77	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 1
78	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 1
79	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 1
80	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 1
81	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 1
82	pH	pH		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 2, 25 °C, total scale
83	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 2, 25 °C
84	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 2, 25 °C
85	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 2, 25 °C
86	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 2, 25 °C
87	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 2, 25 °C
88	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 2, 25 °C
89	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 2, 25 °C
90	pH	pH		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 2, 28 °C, total scale
91	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 2, 28 °C
92	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 2, 28 °C
93	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 2, 28 °C
94	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 2, 28 °C
95	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 2, 28 °C
96	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 2, 28 °C
97	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Experiment 2, 28 °C

License:

Creative Commons Attribution 4.0 International (CC-BY-4.0)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

201814 data points

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