Oprei, Anna; Schreckinger, José; Kholiavko, Tatiana; Frossard, Aline; Mutz, Michael; Risse-Buhl, Ute (2023): Metabolism after drying and bedform migration in the Spree River in 2018/2019 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.941236, In: Oprei, A et al. (2023): Long-term recovery of metabolism, enzyme activity and community abundance after drying and bedform migration in the Spree river 2018/2019 [dataset bundled publication]. PANGAEA, https://doi.org/10.1594/PANGAEA.941237
Always quote citation above when using data! You can download the citation in several formats below.
Abstract:
Sandy streambed sediments that had been exposed to either intense drying (90-day without rainfall) or bedform migration (periodically moving ripples) were placed in 250 µm mesh bags to the Spree River in Northeastern Germany on October 22, 2018, to initiate the recovery process from drying or migration stress. Subsamples from the recovering sediments were collected at eight dates within eight months and taken to the laboratory for further analysis. Community respiration and Net Community Production of sediment associated biofilms were measured as dissolved oxygen concentrations from sediment pore water in inundated microcosms. The aim of the experiment was to observe the long-term recovery of microbial communities in lowland streams from drying and bedform migration and to identify if stress effects persisted as legacy after the stress period.
Keyword(s):
Supplement to:
Oprei, Anna; Schreckinger, José; Kholiavko, Tatiana; Frossard, Aline; Mutz, Michael; Risse-Buhl, Ute (2023): Long-term functional recovery and associated microbial community structure after sediment drying and bedform migration. Frontiers in Ecology and Evolution, 11, 1112519, https://doi.org/10.3389/fevo.2023.1112519
Related to:
Mendoza-Lera, Clara; Frossard, Aline; Knie, Matthias; Federlein, Laura L; Gessner, Mark O; Mutz, Michael (2017): Importance of advective mass transfer and sediment surface area for streambed microbial communities. Freshwater Biology, 62(1), 133-145, https://doi.org/10.1111/fwb.12856
Perez-Mon, Carla; Frey, Beat; Frossard, Aline (2020): Functional and Structural Responses of Arctic and Alpine Soil Prokaryotic and Fungal Communities Under Freeze-Thaw Cycles of Different Frequencies. Frontiers in Microbiology, 11, https://doi.org/10.3389/fmicb.2020.00982
Project(s):
Funding:
Coverage:
Latitude: 51.833333 * Longitude: 14.333333
Date/Time Start: 2018-10-22T10:00:00 * Date/Time End: 2019-06-03T10:00:00
Minimum Elevation: 60.0 m * Maximum Elevation: 60.0 m
Event(s):
Spree_2018-2019 * Latitude: 51.833333 * Longitude: 14.333333 * Date/Time Start: 2018-10-22T10:00:00 * Date/Time End: 2019-06-03T10:00:00 * Elevation: 60.0 m * Location: Spree River near Döbbrick, Brandenburg, Germany * Method/Device: Experiment (EXP) * Comment: Exposition and collection site of sediment samples
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | DATE/TIME | Date/Time | Oprei, Anna | Geocode – Collection date of sediment samples | ||
| 2 | Time in days | Time | days | Oprei, Anna | Days after start of recovery | |
| 3 | Treatment | Treat | Oprei, Anna | |||
| 4 | Community respiration, oxygen, per unit sediment dry mass | CR O2 sed dm | µg/g/h | Oprei, Anna | O2-meter (Oxy10) with oxygen sensor NTH-PSt1 (PreSens), measured in dark, standardized to 20°C, Q10 factor of 2 (Winkler et al. 1996) | |
| 5 | Net community production, oxygen, per unit sediment dry mass | NCP O2 sed dm | µg/g/h | Oprei, Anna | O2-meter (Oxy10) with oxygen sensor NTH-PSt1 (PreSens), measured in light, standardized to 20°C, Q10 factor of 2 (Winkler et al. 1996) | |
| 6 | Gross primary production, oxygen, per unit sediment dry mass | GPP O2 sed dm | µg/g/h | Oprei, Anna | Calculated as Net Community Production minus Community Respiration, standardized to 20°C, Q10 factor of 2 (Winkler et al. 1996) |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
620 data points
Data
| 1 Date/Time | 2 Time [days] | 3 Treat | 4 CR O2 sed dm [µg/g/h] | 5 NCP O2 sed dm [µg/g/h] | 6 GPP O2 sed dm [µg/g/h] |
|---|---|---|---|---|---|
| 2018-10-22T10:00:00 | 0 | in situ | -3.814097086 | 2.935539075 | 6.749636162 |
| 2018-10-22T10:00:00 | 0 | in situ | -2.976723576 | 3.743317972 | 6.720041548 |
| 2018-10-22T10:00:00 | 0 | in situ | -3.547365364 | 2.754658001 | 6.302023365 |
| 2018-10-22T10:00:00 | 0 | in situ | -3.482351458 | 1.887250992 | 5.369602450 |
| 2018-10-22T10:00:00 | 0 | dried | -0.596514722 | -0.442942172 | 0.153572549 |
| 2018-10-22T10:00:00 | 0 | dried | -0.366005361 | -0.198210689 | 0.167794672 |
| 2018-10-22T10:00:00 | 0 | dried | -0.005461764 | -0.101465186 | -0.096003421 |
| 2018-10-22T10:00:00 | 0 | dried | -0.474013798 | -0.163433811 | 0.310579987 |
| 2018-10-22T10:00:00 | 0 | migrated | -1.449446135 | 1.041517175 | 2.490963311 |
| 2018-10-22T10:00:00 | 0 | migrated | -1.520014647 | 1.358952764 | 2.878967412 |
| 2018-10-22T10:00:00 | 0 | migrated | -1.456113987 | 0.783474789 | 2.239588776 |
| 2018-10-22T10:00:00 | 0 | migrated | -1.405835080 | 0.507953115 | 1.913788196 |
| 2018-10-26T10:00:00 | 4 | in situ | -2.751789103 | -0.010461319 | 2.741327784 |
| 2018-10-26T10:00:00 | 4 | in situ | -2.521956725 | -0.322706833 | 2.199249893 |
| 2018-10-26T10:00:00 | 4 | in situ | -2.895898856 | 0.327963170 | 3.223862027 |
| 2018-10-26T10:00:00 | 4 | in situ | -2.378043235 | 0.279963434 | 2.658006669 |
| 2018-10-26T10:00:00 | 4 | dried | -1.676128577 | -0.256765779 | 1.419362799 |
| 2018-10-26T10:00:00 | 4 | dried | -2.602223725 | 2.237614676 | 4.839838401 |
| 2018-10-26T10:00:00 | 4 | dried | -2.418604295 | 0.683780003 | 3.102384298 |
| 2018-10-26T10:00:00 | 4 | dried | -2.346323886 | 0.340515209 | 2.686839096 |
| 2018-10-26T10:00:00 | 4 | migrated | -2.247794889 | 0.171986822 | 2.419781711 |
| 2018-10-26T10:00:00 | 4 | migrated | -2.439085150 | 0.833396830 | 3.272481980 |
| 2018-10-26T10:00:00 | 4 | migrated | -2.477075435 | 0.800685624 | 3.277761059 |
| 2018-10-26T10:00:00 | 4 | migrated | -2.261234764 | 0.138562831 | 2.399797596 |
| 2018-10-26T10:00:00 | 4 | control | -3.634531529 | 3.336734947 | 6.971266476 |
| 2018-10-26T10:00:00 | 4 | control | -3.902396850 | 4.774767257 | 8.677164107 |
| 2018-10-26T10:00:00 | 4 | control | -3.978381247 | 1.544911179 | 5.523292425 |
| 2018-10-26T10:00:00 | 4 | control | -5.211755506 | 4.775221883 | 9.986977389 |
| 2018-10-29T10:00:00 | 7 | in situ | -3.691251778 | 3.701008235 | 7.392260013 |
| 2018-10-29T10:00:00 | 7 | in situ | -5.686433686 | 7.153634644 | 12.840068330 |
| 2018-10-29T10:00:00 | 7 | in situ | -3.866588123 | 3.924268417 | 7.790856540 |
| 2018-10-29T10:00:00 | 7 | in situ | -3.697116210 | 4.936150550 | 8.633266760 |
| 2018-10-29T10:00:00 | 7 | dried | -1.718503899 | -0.252551563 | 1.465952336 |
| 2018-10-29T10:00:00 | 7 | dried | -2.090097685 | 0.884607001 | 2.974704686 |
| 2018-10-29T10:00:00 | 7 | dried | -3.389079388 | 4.273825812 | 7.662905200 |
| 2018-10-29T10:00:00 | 7 | dried | -2.962364927 | 3.964855296 | 6.927220224 |
| 2018-10-29T10:00:00 | 7 | migrated | -3.288099090 | 0.309250926 | 3.597350016 |
| 2018-10-29T10:00:00 | 7 | migrated | -2.025395144 | -0.251512288 | 1.773882856 |
| 2018-10-29T10:00:00 | 7 | migrated | -3.597518545 | 5.253593954 | 8.851112499 |
| 2018-10-29T10:00:00 | 7 | migrated | -2.505271332 | 1.850194748 | 4.355466080 |
| 2018-10-29T10:00:00 | 7 | control | -3.548570430 | 4.585084422 | 8.133654852 |
| 2018-10-29T10:00:00 | 7 | control | -3.755471566 | 2.346730272 | 6.102201838 |
| 2018-10-29T10:00:00 | 7 | control | -3.669855588 | 6.713311976 | 10.383167560 |
| 2018-10-29T10:00:00 | 7 | control | -3.934251171 | 4.228908945 | 8.163160116 |
| 2018-11-12T10:00:00 | 21 | in situ | -5.537507478 | 7.177963001 | 12.715470480 |
| 2018-11-12T10:00:00 | 21 | in situ | -4.121207835 | 2.890710507 | 7.011918342 |
| 2018-11-12T10:00:00 | 21 | in situ | -4.292714544 | 3.434842596 | 7.727557140 |
| 2018-11-12T10:00:00 | 21 | in situ | -4.179310278 | 1.817250530 | 5.996560808 |
| 2018-11-12T10:00:00 | 21 | dried | -2.328889986 | 1.835480470 | 4.164370456 |
| 2018-11-12T10:00:00 | 21 | dried | -3.269074505 | 0.595625368 | 3.864699873 |
| 2018-11-12T10:00:00 | 21 | dried | -1.895844919 | 1.812482221 | 3.708327140 |
| 2018-11-12T10:00:00 | 21 | dried | -1.874220107 | 1.272740116 | 3.146960222 |
| 2018-11-12T10:00:00 | 21 | migrated | -2.471359168 | -0.386473904 | 2.084885263 |
| 2018-11-12T10:00:00 | 21 | migrated | -1.941503444 | -0.589360502 | 1.352142941 |
| 2018-11-12T10:00:00 | 21 | migrated | -2.027096339 | 1.691968087 | 3.719064425 |
| 2018-11-12T10:00:00 | 21 | migrated | -2.020194735 | 1.691368829 | 3.711563564 |
| 2018-11-12T10:00:00 | 21 | control | -2.831256624 | 2.823882505 | 5.655139129 |
| 2018-11-12T10:00:00 | 21 | control | -3.111045708 | 1.421917604 | 4.532963312 |
| 2018-11-12T10:00:00 | 21 | control | -2.183956282 | 1.677869904 | 3.861826185 |
| 2018-11-12T10:00:00 | 21 | control | -2.602091629 | 4.971056179 | 7.573147807 |
| 2018-12-03T10:00:00 | 42 | in situ | -3.291742690 | 2.481275523 | 5.773018214 |
| 2018-12-03T10:00:00 | 42 | in situ | -3.466767839 | 3.860068605 | 7.326836444 |
| 2018-12-03T10:00:00 | 42 | in situ | -3.363648665 | 4.022891602 | 7.386540266 |
| 2018-12-03T10:00:00 | 42 | in situ | -3.715217632 | 3.947218754 | 7.662436387 |
| 2018-12-03T10:00:00 | 42 | dried | -3.423628977 | -1.898686354 | 1.524942624 |
| 2018-12-03T10:00:00 | 42 | dried | -2.367198521 | -1.461847071 | 0.905351450 |
| 2018-12-03T10:00:00 | 42 | dried | -2.413796546 | -1.183243324 | 1.230553223 |
| 2018-12-03T10:00:00 | 42 | dried | -2.279816951 | -1.381849349 | 0.897967602 |
| 2018-12-03T10:00:00 | 42 | migrated | -3.941478534 | -3.066054048 | 0.875424487 |
| 2018-12-03T10:00:00 | 42 | migrated | -2.997421516 | -1.596220757 | 1.401200760 |
| 2018-12-03T10:00:00 | 42 | migrated | -2.774803080 | -1.575967051 | 1.198836029 |
| 2018-12-03T10:00:00 | 42 | migrated | -3.920405980 | -1.166605190 | 2.753800790 |
| 2018-12-03T10:00:00 | 42 | control | -3.457042747 | -0.531378985 | 2.925663762 |
| 2018-12-03T10:00:00 | 42 | control | -2.986546622 | 0.657324299 | 3.643870921 |
| 2018-12-03T10:00:00 | 42 | control | -3.326913080 | -0.453130327 | 2.873782754 |
| 2018-12-03T10:00:00 | 42 | control | -3.952222865 | 0.788024685 | 4.740247550 |
| 2019-02-04T10:00:00 | 105 | in situ | -16.434304230 | 14.628494230 | 31.062798460 |
| 2019-02-04T10:00:00 | 105 | in situ | -8.314117219 | 7.210031223 | 15.524148440 |
| 2019-02-04T10:00:00 | 105 | in situ | -7.126307949 | 11.892931400 | 19.019239350 |
| 2019-02-04T10:00:00 | 105 | in situ | -8.380408073 | 11.050801630 | 19.431209710 |
| 2019-02-04T10:00:00 | 105 | dried | -4.317679825 | 1.095614868 | 5.413294693 |
| 2019-02-04T10:00:00 | 105 | dried | -3.242771066 | -0.760143448 | 2.482627618 |
| 2019-02-04T10:00:00 | 105 | dried | -2.984755838 | -0.470688778 | 2.514067059 |
| 2019-02-04T10:00:00 | 105 | dried | -3.862306521 | -0.916380347 | 2.945926174 |
| 2019-02-04T10:00:00 | 105 | migrated | -5.040092010 | -0.512431651 | 4.527660359 |
| 2019-02-04T10:00:00 | 105 | migrated | -3.518574471 | 0.522338032 | 4.040912503 |
| 2019-02-04T10:00:00 | 105 | migrated | -5.690149747 | -0.669561712 | 5.020588035 |
| 2019-02-04T10:00:00 | 105 | migrated | -3.639142852 | -0.103632449 | 3.535510402 |
| 2019-02-04T10:00:00 | 105 | control | -4.772675292 | 1.113007774 | 5.885683066 |
| 2019-02-04T10:00:00 | 105 | control | -4.647374032 | 2.682665257 | 7.330039289 |
| 2019-02-04T10:00:00 | 105 | control | -5.107706912 | 0.863413519 | 5.971120431 |
| 2019-02-04T10:00:00 | 105 | control | -4.698389345 | 1.198671344 | 5.897060689 |
| 2019-04-01T10:00:00 | 161 | in situ | -2.322023242 | 5.888743542 | 8.210766784 |
| 2019-04-01T10:00:00 | 161 | in situ | -4.393503370 | 5.803531325 | 10.197034690 |
| 2019-04-01T10:00:00 | 161 | in situ | -2.002894402 | 5.318090284 | 7.320984686 |
| 2019-04-01T10:00:00 | 161 | in situ | -2.458693289 | 6.238650544 | 8.697343833 |
| 2019-04-01T10:00:00 | 161 | dried | -3.212544293 | 1.502439057 | 4.714983350 |
| 2019-04-01T10:00:00 | 161 | dried | -1.503568742 | 0.341771029 | 1.845339771 |
| 2019-04-01T10:00:00 | 161 | dried | -1.137205703 | 0.443311208 | 1.580516911 |
| 2019-04-01T10:00:00 | 161 | dried | -2.543209615 | 2.214364260 | 4.757573875 |
| 2019-04-01T10:00:00 | 161 | migrated | -2.683449243 | 0.122717759 | 2.806167002 |
| 2019-04-01T10:00:00 | 161 | migrated | -2.174907037 | 0.091527925 | 2.266434962 |
| 2019-04-01T10:00:00 | 161 | migrated | -2.450235489 | 0.226214164 | 2.676449653 |
| 2019-04-01T10:00:00 | 161 | migrated | -2.133004837 | -0.390108260 | 1.742896577 |
| 2019-04-01T10:00:00 | 161 | control | -4.354497647 | 2.188235732 | 6.542733380 |
| 2019-04-01T10:00:00 | 161 | control | -2.547841344 | 3.857504028 | 6.405345372 |
| 2019-04-01T10:00:00 | 161 | control | -1.576999953 | 1.277731784 | 2.854731737 |
| 2019-04-01T10:00:00 | 161 | control | -2.425641690 | 3.752075570 | 6.177717260 |
| 2019-06-03T10:00:00 | 224 | in situ | -6.993938471 | 2.692430739 | 9.686369210 |
| 2019-06-03T10:00:00 | 224 | in situ | -4.579225156 | 2.422192348 | 7.001417504 |
| 2019-06-03T10:00:00 | 224 | in situ | -7.939789522 | 3.984812676 | 11.924602200 |
| 2019-06-03T10:00:00 | 224 | in situ | -4.162694072 | 2.521213934 | 6.683908006 |
| 2019-06-03T10:00:00 | 224 | dried | -4.234787669 | 2.350557607 | 6.585345276 |
| 2019-06-03T10:00:00 | 224 | dried | -3.683794031 | 0.992089605 | 4.675883636 |
| 2019-06-03T10:00:00 | 224 | dried | -3.897036154 | 1.445470515 | 5.342506668 |
| 2019-06-03T10:00:00 | 224 | dried | -3.930275555 | 0.907051551 | 4.837327106 |
| 2019-06-03T10:00:00 | 224 | migrated | -4.137015872 | 0.397302616 | 4.534318488 |
| 2019-06-03T10:00:00 | 224 | migrated | -3.312870307 | 1.594143982 | 4.907014289 |
| 2019-06-03T10:00:00 | 224 | migrated | -3.924653119 | 0.135361194 | 4.060014313 |
| 2019-06-03T10:00:00 | 224 | migrated | -3.504839395 | 1.442563905 | 4.947403300 |
| 2019-06-03T10:00:00 | 224 | control | -4.665959332 | 3.865358989 | 8.531318321 |
| 2019-06-03T10:00:00 | 224 | control | -4.586304606 | 0.487259712 | 5.073564318 |
| 2019-06-03T10:00:00 | 224 | control | -3.591816652 | 1.868244545 | 5.460061198 |
| 2019-06-03T10:00:00 | 224 | control | -4.046585144 | 2.824185756 | 6.870770900 |