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Asnicar, Davide; Novoa-Abelleira, Alberto; Minichino, Riccardo; Badocco, D; Pastore, P; Finos, L; Munari, M; Marin, Maria Gabriella (2021): Seawater carbonate chemistry and respiration rate, ammonia excretion, O:N ratio and behaviour of sea urchins Paracentrotus lividus [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.939892

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Abstract:
CO2-driven ocean acidification affects many aspects of sea urchin biology. However, even in the same species, OA effects are often not univocal due to non-uniform exposure setups or different ecological history of the experimental specimens. In the present work, two groups of adult sea urchins Paracentrotus lividus from different environments (the Lagoon of Venice and a coastal area in the Northern Adriatic Sea) were exposed to OA in a long-term exposure. Animals were maintained for six months in both natural seawater (pHT 8.04) and end-of-the-century predicted condition (-0.4 units pH). Monthly, physiological (respiration rate, ammonia excretion, O:N ratio) and behavioural (righting, sheltering) endpoints were investigated. Both pH and time of exposure significantly influenced sea urchin responses, but differences between sites were highlighted, particularly in the first months. Under reduced pH, ammonia excretion increased and O:N decreased in coastal specimens. Righting and sheltering were impaired in coastal animals, whereas only righting decreased in lagoon ones. These findings suggested a higher adaptation ability in sea urchins from a more variable environment. Interestingly, as the exposure continued, animals from both sites were able to acclimate. Results revealed plasticity in the physiological and behavioural responses of sea urchins under future predicted OA conditions.
Keyword(s):
Animalia; Behaviour; Benthic animals; Benthos; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Echinodermata; Growth/Morphology; Laboratory experiment; Mediterranean Sea; Other metabolic rates; Paracentrotus lividus; Respiration; Single species; Temperate
Supplement to:
Asnicar, Davide; Novoa-Abelleira, Alberto; Minichino, Riccardo; Badocco, D; Pastore, P; Finos, L; Munari, M; Marin, Maria Gabriella (2021): When site matters: Metabolic and behavioural responses of adult sea urchins from different environments during long-term exposure to seawater acidification. Marine Environmental Research, 169, 105372, https://doi.org/10.1016/j.marenvres.2021.105372
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
Coverage:
Median Latitude: 45.476500 * Median Longitude: 12.980950 * South-bound Latitude: 45.228000 * West-bound Longitude: 12.270000 * North-bound Latitude: 45.725000 * East-bound Longitude: 13.691900
Event(s):
Gulf_of_Trieste * Latitude: 45.725000 * Longitude: 13.691900 * Method/Device: Experiment (EXP) * Comment: Where the studied organisms were collected
Venice_Lagoon_OA * Latitude: 45.228000 * Longitude: 12.270000 * Method/Device: Experiment (EXP) * Comment: Where the studied organisms were collected
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-1-6. In the experiment, two exposures have been carried out: one with sea urchin collected within the Lagoon of Venice, the other with animals from the Gulf of Trieste. Both exposures have been carried out in a facility placed within the Lagoon of Venice.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventMarin, Maria Gabriella
2TypeTypeMarin, Maria Gabriellastudy
3SpeciesSpeciesMarin, Maria Gabriella
4Registration number of speciesReg spec noMarin, Maria Gabriella
5Uniform resource locator/link to referenceURL refMarin, Maria GabriellaWoRMS Aphia ID
6Experiment durationExp durationmonthsMarin, Maria Gabriella
7SiteSiteMarin, Maria Gabriellawhere the studied sea urchin were collected
8Time point, descriptiveTime pointMarin, Maria Gabriella
9TreatmentTreatMarin, Maria Gabriella
10IdentificationIDMarin, Maria GabriellaTank
11ReplicateReplMarin, Maria Gabriella
12MassMassgMarin, Maria Gabriella
13DiameterDiametercmMarin, Maria Gabriella
14VolumeVollMarin, Maria Gabriella
15Respiration rate, oxygenResp O2µmol/g/hMarin, Maria Gabriella
16Ammonia excretionNH3/[NH4]+ excµmol/g/hMarin, Maria Gabriella
17Respiration rate/ammonia excretionO/NMarin, Maria Gabriella
18BatchBatchMarin, Maria Gabriella
19IdentificationIDMarin, Maria GabriellaSeaurchin
20LengthlcmMarin, Maria Gabriella
21Righting timeRighting timesMarin, Maria Gabriella
22Number of animals rightingRighting%Marin, Maria Gabriella
23IdentificationIDMarin, Maria GabriellaEnter
24CommentCommentMarin, Maria GabriellaDid it moved? 1=yes
25Number of squaresN square#Marin, Maria Gabriellacrossed
26PositionPositionMarin, Maria Gabriella
27CommentCommentMarin, Maria GabriellaDid it reached the Shadow 1=yes
28Time in secondsTimesMarin, Maria GabriellaApproaching
29CommentCommentMarin, Maria GabriellaDid it entered the Shadow 1=yes
30Time in secondsTimesMarin, Maria Gabriellaentering
31Time in secondsTimesMarin, Maria Gabriellasheltering
32SpeedSpeed#/minMarin, Maria Gabriella
33pHpHMarin, Maria Gabriellatotal scale
34pH, standard deviationpH std dev±Marin, Maria Gabriellatotal scale
35Temperature, waterTemp°CMarin, Maria Gabriella
36Temperature, water, standard deviationTemp std dev±Marin, Maria Gabriella
37SalinitySalMarin, Maria Gabriella
38Salinity, standard deviationSal std dev±Marin, Maria Gabriella
39Oxygen, gasO2ppmvMarin, Maria Gabriella
40Oxygen, standard deviationO2 std dev±Marin, Maria Gabriella
41Alkalinity, totalATµmol/kgMarin, Maria Gabriella
42Alkalinity, total, standard deviationAT std dev±Marin, Maria Gabriella
43Carbon, inorganic, dissolvedDICµmol/kgMarin, Maria Gabriella
44Carbon, inorganic, dissolved, standard deviationDIC std dev±Marin, Maria Gabriella
45Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmMarin, Maria Gabriella
46Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Marin, Maria Gabriella
47Calcite saturation stateOmega CalMarin, Maria Gabriella
48Calcite saturation state, standard deviationOmega Cal std dev±Marin, Maria Gabriella
49Aragonite saturation stateOmega ArgMarin, Maria Gabriella
50Aragonite saturation state, standard deviationOmega Arg std dev±Marin, Maria Gabriella
51Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
52Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
53Carbon dioxide, standard deviationCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
54Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
55Fugacity of carbon dioxide in seawater, standard deviationfCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
56Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
57Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
58Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
59Bicarbonate ion, standard deviation[HCO3]- std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
60Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
61Carbonate ion, standard deviation[CO3]2- std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
62Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
63Carbon, inorganic, dissolved, standard deviationDIC std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
64Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
65Aragonite saturation state, standard deviationOmega Arg std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
66Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
67Calcite saturation state, standard deviationOmega Cal std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
64749 data points

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