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Tipple, Brett James; Christensen, Stephanie; Ianiri, Hope L; McCarthy, Matthew D; Vokhshoori, Natasha L (2021): Stable carbon isotope amino acids fingerprints of estuarine and freshwater macrophyte and terrestrial primary producers [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.938274, In: Tipple, BJ et al. (2021): A new molecular isotopic toolkit to examine estuarine food webs and biogeochemistry: Compound specific isotope analyses of amino acids from aquatic and terrestrial plants of the Sacramento-San Joaquin Delta, California [dataset bundled publication]. PANGAEA, https://doi.org/10.1594/PANGAEA.938300

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Abstract:
Plant material was collected from aquatic and terrestrial environments from the Sacramento-San Joaquin River Delta. Carbon isotope values of bulk plant tissue and individual amino acids were measured. Fifty-five specimens were collected, including trees, shrubs, forbs, and grasses as well as floating, submerged, and emergent aquatic plants. Bulk tissues were processed and the carbon isotope values were measured following Tipple and Ehleringer, 2018 (Oecologia, 187, 1053-1075). Amino acids were hydrolyzed, derivatized, and isolated following Vokhshoori et al., 2013 (Marine Ecology Progress Series, 504, 59-72). Carbon isotope values of individual amino acids were measured following Vokhshoori et al., 2013. The purpose of this study was to assess if amino acid fingerprints of macrophyte primary producers were distinct from those of marine primary producers and terrestrial vascular plant species. The goal of this study was to provide a benchmark dataset for the next generation of food web monitoring programs within estuarine and mixed source environments.
Keyword(s):
California; CSIA; ecology; estuaries; Food web; San Francisco Bay; trophic discrimination factor; trophic level; trophic position
Related to:
Vokhshoori, Natasha L; Tipple, Brett James; Teague, Laurel; Bailess, Alexander; McCarthy, Matthew D (2022): Calibrating bulk and amino acid δ13C and δ15N isotope ratios between bivalve soft tissue and shell for paleoecological reconstructions. Palaeogeography, Palaeoclimatology, Palaeoecology, 595, 110979, https://doi.org/10.1016/j.palaeo.2022.110979
Funding:
California Department of Fish and Wildlife, grant/award no. Q1996033: Developing a new molecular isotopic tool to examine Delta food webs
Coverage:
Median Latitude: 38.055202 * Median Longitude: -121.632775 * South-bound Latitude: 37.986300 * West-bound Longitude: -121.729000 * North-bound Latitude: 38.286900 * East-bound Longitude: -121.523000
Date/Time Start: 2019-04-10T00:00:00 * Date/Time End: 2020-08-06T00:00:00
Event(s):
Big_Break_Regional_Shoreline * Latitude: 38.009300 * Longitude: -121.729000 * Location: Sacramento-San Joaquin River Delta, California, U.S.A. * Method/Device: Sampling by hand (HAND)
Liberty_Island * Latitude: 38.286900 * Longitude: -121.678600 * Location: Sacramento-San Joaquin River Delta, California, U.S.A. * Method/Device: Sampling by hand (HAND)
Mildred_Island * Latitude: 37.986300 * Longitude: -121.523000 * Location: Sacramento-San Joaquin River Delta, California, U.S.A. * Method/Device: Sampling by hand (HAND)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventTipple, Brett James
2Sample IDSample IDTipple, Brett James
3SpeciesSpeciesTipple, Brett James
4Species, common nameSpecies commonTipple, Brett James
5Plant functional typePFTTipple, Brett James
6DATE/TIMEDate/TimeTipple, Brett JamesGeocode
7SiteSiteTipple, Brett James
8LATITUDELatitudeTipple, Brett JamesGeocode
9LONGITUDELongitudeTipple, Brett JamesGeocode
10δ13C, bulk carbonateδ13C bulk carb‰ PDBTipple, Brett Jamesvs. VPDB
11Alanine, δ13CAla δ13C‰ PDBTipple, Brett Jamesvs. VPDB
12Alanine, δ13C, standard deviationAla δ13C std dev±Tipple, Brett Jamesvs. VPDB
13Aspartic acid, δ13CAsp δ13C‰ PDBTipple, Brett Jamesvs. VPDB
14Aspartic acid, δ13C, standard deviationAsp δ13C std dev±Tipple, Brett Jamesvs. VPDB
15Glutamic acid, δ13CGlu δ13C‰ PDBTipple, Brett Jamesvs. VPDB
16Glutamic acid δ13C, standard deviationGlu δ13C std dev±Tipple, Brett Jamesvs. VPDB
17Ophiactis asperulaO. asperula#Tipple, Brett Jamesvs. VPDB
18Homalophiura inornataH. inornata#Tipple, Brett Jamesvs. VPDB
19Isoleucine, δ13CIle δ13C‰ PDBTipple, Brett Jamesvs. VPDB
20Isoleucine, δ13C, standard deviationIle δ13C std dev±Tipple, Brett Jamesvs. VPDB
21Leucine, δ13CLeu δ13C‰ PDBTipple, Brett Jamesvs. VPDB
22Leucine, δ13C, standard deviationLeu δ13C std dev±Tipple, Brett Jamesvs. VPDB
23Lysine, δ13CLys δ13C‰ PDBTipple, Brett Jamesvs. VPDB
24Lysine, δ13C, standard deviationLys δ13C std dev±Tipple, Brett Jamesvs. VPDB
25Phenylalanine, δ13CPhe δ13C‰ PDBTipple, Brett Jamesvs. VPDB
26Phenylalanine, δ13C, standard deviationPhe δ13C std dev±Tipple, Brett Jamesvs. VPDB
27Proline, δ13CPro δ13C‰ PDBTipple, Brett Jamesvs. VPDB
28Proline, δ13C, standard deviationPro δ13C std dev±Tipple, Brett Jamesvs. VPDB
29Serine, δ13CSer δ13C‰ PDBTipple, Brett Jamesvs. VPDB
30Serine, δ13C, standard deviationSer δ13C std dev±Tipple, Brett Jamesvs. VPDB
31Threonine, δ13CThr δ13C‰ PDBTipple, Brett Jamesvs. VPDB
32Threonine, δ13C, standard deviationThr δ13C std dev±Tipple, Brett Jamesvs. VPDB
33Valine, δ13CVal δ13C‰ PDBTipple, Brett Jamesvs. VPDB
34Valine, δ13C, standard deviationVal δ13C std dev±Tipple, Brett Jamesvs. VPDB
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1650 data points

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