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Waldbusser, George G; Hales, Burke; Langdon, Chris; Haley, Brian A; Schrader, Paul; Brunner, Elizabeth L; Gray, Matthew W; Miller, Cale A; Gimenez, Iria (2015): Seawater carbonate chemistry and larval shell development and growth of marine bivalve [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.934173

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Abstract:
Ocean acidification results in co-varying inorganic carbon system variables. Of these, an explicit focus on pH and organismal acid–base regulation has failed to distinguish the mechanism of failure in highly sensitive bivalve larvae. With unique chemical manipulations of seawater we show definitively that larval shell development and growth are dependent on seawater saturation state, and not on carbon dioxide partial pressure or pH. Although other physiological processes are affected by pH, mineral saturation state thresholds will be crossed decades to centuries ahead of pH thresholds owing to nonlinear changes in the carbonate system variables as carbon dioxide is added. Our findings were repeatable for two species of bivalve larvae could resolve discrepancies in experimental results, are consistent with a previous model of ocean acidification impacts due to rapid calcification in bivalve larvae, and suggest a fundamental ocean acidification bottleneck at early life-history for some marine keystone species.
Keyword(s):
Animalia; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Crassostrea gigas; Development; Growth/Morphology; Laboratory experiment; Mollusca; Mytilus galloprovincialis; North Pacific; Pelagos; Single species; Temperate; Zooplankton
Supplement to:
Waldbusser, George G; Hales, Burke; Langdon, Chris; Haley, Brian A; Schrader, Paul; Brunner, Elizabeth L; Gray, Matthew W; Miller, Cale A; Gimenez, Iria (2015): Saturation-state sensitivity of marine bivalve larvae to ocean acidification. Nature Climate Change, 5(3), 273-280, https://doi.org/10.1038/NCLIMATE2479
Original version:
Waldbusser, George G (2016): Dataset: Oyster Mussel Carbonate Responses. Biological and Chemical Oceanography Data Management Office, https://www.bco-dmo.org/dataset/638362
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2021-07-28.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
TypeTypeWaldbusser, George Gstudy
SpeciesSpeciesWaldbusser, George G
Registration number of speciesReg spec noWaldbusser, George G
Uniform resource locator/link to referenceURL refWaldbusser, George GWoRMS Aphia ID
ExperimentExpWaldbusser, George G
TreatmentTreatWaldbusser, George Gvalues for saturation state of aragonite are noted as a to d denoted the lowest to highest values
TreatmentTreatWaldbusser, George G
Alkalinity, totalATµmol/kgWaldbusser, George G
Carbon, inorganic, dissolvedDICµmol/kgWaldbusser, George G
10 Bicarbonate ion[HCO3]-µmol/kgWaldbusser, George G
11 Carbonate ion[CO3]2-µmol/kgWaldbusser, George G
12 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmWaldbusser, George G
13 pHpHWaldbusser, George Gtotal scale
14 Aragonite saturation stateOmega ArgWaldbusser, George G
15 ProportionPropWaldbusser, George Gfraction of Normally Developed Larvae
16 Shell lengthShell lmmWaldbusser, George G
17 Proportion, standard deviationProp std dev±Waldbusser, George Gfraction of Normally Developed Larvae
18 Shell length, standard deviationShell l std dev±Waldbusser, George G
19 Temperature, waterTemp°CWaldbusser, George G
20 SalinitySalWaldbusser, George G
21 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
22 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
23 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
24 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
25 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
26 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
27 Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1784 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Type
(study)

Species

Reg spec no

URL ref
(WoRMS Aphia ID)

Exp

Treat
(values for saturation state o...)

Treat

AT [µmol/kg]

DIC [µmol/kg]
10 
[HCO3]- [µmol/kg]
11 
[CO3]2- [µmol/kg]
12 
pCO2water_SST_wet [µatm]
13 
pH
(total scale)
14 
Omega Arg
15 
Prop
(fraction of Normally Develope...)
16 
Shell l [mm]
17 
Prop std dev [±]
(fraction of Normally Develope...)
18 
Shell l std dev [±]
19 
Temp [°C]
20 
Sal
21 
CSC flag
22 
pH
(total scale)
23 
CO2 [µmol/kg]
24 
fCO2water_SST_wet [µatm]
25 
[HCO3]- [µmol/kg]
26 
[CO3]2- [µmol/kg]
27 
AT [µmol/kg]
28 
Omega Arg
29 
Omega Cal
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org1aHigh pCO22026204619363625997.270.570.080.042233.0257.2680.362590.381933.0132.632014.610.520.79
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org1aLow pCO2845806764255897.510.390.360.072233.0257.5018.21587.05765.2322.56838.200.360.55
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org1aMid-High pCO21269125311892812407.370.450.060.012233.0257.3738.341235.891188.8025.871261.400.410.63
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org1aMid-Low pCO2980952903258157.440.400.170.032233.0257.4425.20812.30904.0422.76973.550.360.55
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org1bHigh pCO22851284126966627677.381.040.800.032233.0257.3885.552757.822695.8459.612836.260.941.45
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org1bLow pCO211341049985514777.710.810.820.022233.0257.7114.75475.42987.8246.431123.490.741.13
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org1bMid-High pCO21761172316354913617.470.780.760.022233.0257.4742.081356.491636.2744.651751.450.711.09
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org1bMid-Low pCO2136513051234478097.580.750.830.042233.0257.5725.01806.321237.0642.931355.340.681.05
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org1cHigh pCO240263977377411131917.471.770.910.032233.0257.4698.663180.403776.88101.464005.311.612.47
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org1cLow pCO2151913741269934337.861.470.860.032233.0257.8613.39431.571275.3685.251504.361.352.08
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org1cMid-High pCO225072399226110212567.651.610.900.032233.0257.6538.831251.842267.2892.892490.841.472.26
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org1cMid-Low pCO2190517711651996857.781.580.870.002233.0257.7721.18682.731658.6791.151890.221.442.22
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org1dHigh pCO257725619531221133347.603.350.880.042233.0257.59103.083322.935323.03192.895742.553.064.70
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org1dLow pCO22247195717422053698.073.250.910.032233.0258.0711.41367.781755.95189.642222.613.014.62
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org1dMid-High pCO236443438320919013527.773.020.960.012233.0257.7741.801347.523221.94174.263619.012.764.24
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org1dMid-Low pCO22836256823402106537.953.320.890.042233.0257.9520.19650.842355.05192.762810.123.054.69
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org2aHigh pCO22401237922625718917.470.920.570.072970.040.000082531.0257.4854.641884.962257.5166.852417.581.091.66
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org2aLow pCO2754683642332657.770.530.450.072490.130.000712531.0257.787.66264.15637.3238.02763.380.620.95
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org2aMid-High pCO2142813691298487437.630.770.450.072420.160.000252531.0257.6421.47740.631291.8255.711440.620.901.39
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org2aMid-Low pCO21028958904414187.720.670.330.073800.130.000962531.0257.7312.08416.67898.0647.861039.030.781.19
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org2bHigh pCO234083337316910420457.581.670.840.076290.050.000282531.0257.5959.092038.463157.01120.903432.311.963.01
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org2bLow pCO21119989910712467.961.140.910.073710.060.000092531.0257.977.11245.22900.1881.711135.331.332.03
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org2bMid-High pCO2201118931776947157.781.500.820.075660.050.000382531.0257.7920.66712.721764.34108.002031.501.752.68
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org2bMid-Low pCO2148113561261824127.871.310.860.076490.030.000392531.0257.8811.91410.691250.0294.081499.401.532.34
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org2cHigh pCO249044701442321819057.763.490.890.077960.020.000502531.0257.7755.051898.914394.49251.464945.634.086.25
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org2cLow pCO21672143912831492358.132.380.980.075030.040.001272531.0258.136.79234.251263.66168.551698.532.744.19
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org2cMid-High pCO22933271825161787567.912.850.900.077020.030.000202531.0257.9221.85753.592492.34203.822965.693.315.07
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org2cMid-Low pCO22190196517891634178.022.610.950.076800.020.000762531.0258.0312.05415.671767.18185.772219.653.024.62
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org2dHigh pCO270296634616940120137.886.430.930.080040.030.000582531.0257.8858.172006.566115.04460.797097.927.4811.46
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org2dLow pCO22537211718053052268.294.891.000.077800.010.000602531.0258.306.53225.281767.56342.912582.455.578.52
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org2dMid-High pCO24317393335743338158.035.331.000.079520.010.000482531.0258.0423.55812.403530.15379.304371.136.169.43
laboratoryCrassostrea gigas (mollusk)140656marinespecies.org2dMid-Low pCO23236283425033184198.175.090.960.078220.070.000342531.0258.1712.11417.662462.81359.083285.655.838.93
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org1aHigh pCO21668173516231726717.160.280.000.001830.0257.1793.802661.681623.5217.681669.180.280.44
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org1aMid-High pCO21252126812011813937.320.290.000.001830.0257.3248.921388.151200.5518.531252.130.290.46
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org1aMid-Low pCO2956941896207197.480.310.000.001830.0257.4825.25716.50895.7619.99956.420.320.49
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org1aLow pCO2894800746472087.940.750.120.071830.0257.947.30207.28744.9147.79894.660.751.18
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org1bMid-High pCO21764178716942718697.340.430.030.011830.0257.3465.641862.491693.8627.501764.100.430.68
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org1bHigh pCO22357243022882832147.230.460.000.001830.0257.24112.873202.782287.9529.182358.350.460.72
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org1bMid-Low pCO2131812891228328177.560.520.030.021830.0257.5628.69814.161227.2833.021318.020.520.82
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org1bLow pCO21048986934384017.750.610.170.051830.0257.7514.08399.61933.0338.891047.790.610.96
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org1cHigh pCO23391344332675434447.360.870.410.021830.0257.36120.953431.983266.5555.503393.480.881.37
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org1cMid-Low pCO2192518571763648517.701.020.680.081830.0257.7029.89848.041761.7865.341925.701.031.61
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org1cMid-High pCO22501245823416614417.591.060.600.091830.0257.6050.611435.982339.3668.032501.971.071.68
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org1cLow pCO2147013721290674367.851.070.640.081830.0257.8615.31434.481288.4868.211470.711.081.69
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org1dMid-High pCO236693573339312116577.691.940.780.031830.0257.7058.191651.233390.53124.283671.981.963.07
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org1dHigh pCO249084868463712330607.561.960.890.211830.0257.57107.463049.324634.79125.754911.171.993.11
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org1dMid-Low pCO22770262624691278377.852.030.730.031830.0257.8529.39834.092466.41130.192772.492.063.22
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org1dLow pCO22175198318281414148.032.250.970.141830.0258.0314.54412.561824.44144.022177.102.273.56
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org2aMid-High pCO21364137413032213927.350.350.000.001831.4257.3548.511387.151303.0122.481364.610.350.55
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org2aLow pCO2855813773254307.630.390.060.021831.4257.6414.99428.50772.4425.57854.450.400.63
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org2aMid-Low pCO2113110991047296847.560.460.020.011831.4257.5723.84681.621045.7029.461131.180.460.72
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org2aHigh pCO22308235822293227817.280.510.000.001831.4257.2996.922771.302228.1832.902308.300.520.81
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org2bMid-Low pCO2146314221353418117.600.640.110.097710.020.001491831.4257.6028.26808.181352.1941.551464.080.651.02
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org2bMid-High pCO21975196618724115487.460.640.010.094770.010.000461831.4257.4653.951542.611870.4041.651974.970.651.02
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org2bLow pCO2122111431078504207.790.790.520.101320.060.000611831.4257.7914.64418.541077.4250.941222.010.801.25
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org2bHigh pCO23269329631325930037.400.930.230.097960.030.001051831.4257.40104.652992.523131.1860.173269.980.951.47
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org2cMid-High pCO22843279626617716647.581.210.810.109270.050.002901831.4257.5957.991658.202659.6678.352844.041.231.92
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org2cMid-Low pCO2217420691954897757.781.400.780.108700.090.000661831.4257.7827.01772.301951.4390.562174.551.422.22
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org2cLow pCO2164515091404913907.941.440.570.108200.040.000431831.4257.9413.59388.641402.4692.951645.821.462.28
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org2cHigh pCO246634621440011829467.551.860.910.109380.030.001061831.4257.56102.672935.724397.36120.974665.271.902.96
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org2dMid-High pCO241664013379216615587.762.621.000.114940.010.000381831.4257.7754.301552.573788.89169.824169.232.674.16
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org2dMid-Low pCO23172296627621767817.932.770.920.113330.060.000201831.4257.9327.22778.282759.14179.653175.022.824.40
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org2dLow pCO22485222020111963718.113.090.930.112690.070.000541831.4258.1212.93369.712006.98200.092487.923.144.90
laboratoryMytilus galloprovincialis (mollusk)140481marinespecies.org2dHigh pCO267136528618524528137.723.860.950.117530.020.000311831.4257.7298.032803.196179.76250.216717.303.936.13