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Zhang, Yong; Gao, Kunshan (2021): Seawater carbonate chemistry and photosynthesis and calcification of the coccolithophore Emiliania huxleyi [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.932293

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Abstract:
Photophysiological responses of phytoplankton to changing multiple environmental drivers are essential in understanding and predicting ecological consequences of ocean climate changes. In this study, we investigated the combined effects of two CO2 levels (410 and 925 μatm) and five light intensities (80 to 480 μmol photons/m**2/s) on cellular pigments contents, photosynthesis and calcification of the coccolithophore Emiliania huxleyi grown under nutrient replete and limited conditions, respectively. Our results showed that high light intensity, high CO2 level and nitrate limitation acted synergistically to reduce cellular chlorophyll a and carotenoid contents. Nitrate limitation predominantly enhanced calcification rate; phosphate limitation predominantly reduced photosynthetic carbon fixation rate, with larger extent of the reduction under higher levels of CO2 and light. Reduced availability of both nitrate and phosphate under the elevated CO2 concentration decreased saturating light levels for the cells to achieve the maximal relative electron transport rate (rETRmax). Light-saturating levels for rETRmax were lower than that for photosynthetic and calcification rates under the nutrient limitation. Regardless of the culture conditions, rETR under growth light levels correlated linearly and positively with measured photosynthetic and calcification rates. Our findings imply that E. huxleyi cells acclimated to macro-nutrient limitation and elevated CO2 concentration decreased their light requirement to achieve the maximal electron transport, photosynthetic and calcification rates, indicating a photophysiological strategy to cope with CO2 rise/pH drop in shoaled upper mixing layer above the thermocline where the microalgal cells are exposed to increased levels of light and decreased levels of nutrients.
Keyword(s):
Bottles or small containers/Aquaria (<20 L); Calcification/Dissolution; Chromista; Emiliania huxleyi; Haptophyta; Laboratory experiment; Laboratory strains; Light; Macro-nutrients; Not applicable; Pelagos; Phytoplankton; Primary production/Photosynthesis; Single species
Supplement to:
Li, Futian; Xu, Jiekai; Beardall, John; Gao, Kunshan (2021): Diurnally fluctuating pCO2 enhances growth of a coastal strain of Emiliania huxleyi under future-projected ocean acidification conditions. ICES Journal of Marine Science, https://doi.org/10.1093/icesjms/fsab036
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2021-05-31.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeGao, Kunshanstudy
2SpeciesSpeciesGao, Kunshan
3Registration number of speciesReg spec noGao, Kunshan
4Uniform resource locator/link to referenceURL refGao, KunshanWoRMS Aphia ID
5TreatmentTreatGao, Kunshan
6IrradianceEµmol/m2/sGao, Kunshan
7Chlorophyll a per cellChl a/cellpg/#Gao, Kunshan
8Chlorophyll a, standard deviationChl a std dev±Gao, Kunshan
9Carotenoids per cellCarotenoids/cellpg/#Gao, Kunshan
10CarotenoidsCarotenoidsµg/gGao, Kunshan
11Carotenoids/Chlorophyll a ratioCarotenoids/Chl aGao, Kunshan
12Carotenoids/Chlorophyll a ratio, standard deviationCarotenoids/Chl a std dev±Gao, Kunshan
13Maximal electron transport rate, relativerETR maxGao, Kunshan
14Maximal electron transport rate, relative, standard deviationrETR max std dev±Gao, Kunshan
15Light use efficiencyalphaGao, Kunshan
16Light use efficiency, standard deviationalpha std dev±Gao, Kunshan
17Light saturation pointIkµmol/m2/sGao, Kunshan
18Light saturation point, standard deviationIk std dev±Gao, Kunshan
19Effective photochemical quantum yieldphi PS IIGao, Kunshan
20Effective photochemical quantum yield, standard deviationphi PS II std dev±Gao, Kunshan
21Net photosynthesis rate, per cellPN/cellpg/#/hGao, Kunshan
22Net photosynthesis rate, standard deviationPN std dev±Gao, Kunshan
23Calcification rate of carbon per cellCalc rate C/cellpg/#/hGao, Kunshan
24Calcification rate, standard deviationCalc rate std dev±Gao, Kunshan
25Calcification rate/Photosynthesis rate, ratioCalc rate/PGao, Kunshan
26Calcification rate/Photosynthesis rate, ratio, standard deviationCalc rate/P std dev±Gao, Kunshan
27RatioRatioGao, Kunshanlight use efficiency to effective photochemical quantum yield
28Ratio, standard deviationRatio std dev±Gao, Kunshanlight use efficiency to effective photochemical quantum yield
29Non photochemical quenchingNPQGao, Kunshan
30Non photochemical quenching, standard deviationNPQ std dev±Gao, Kunshan
31RatioRatioGao, KunshanrETR to photosynthetic rate
32Ratio, standard deviationRatio std dev±Gao, KunshanrETR to photosynthetic rate
33RatioRatioGao, KunshanrETR to calcification rate
34Ratio, standard deviationRatio std dev±Gao, KunshanrETR to calcification rate
35Experiment durationExp durationdaysGao, Kunshan
36Cell density, natural logarithmLN cellsGao, Kunshan
37Cell density, natural logarithm, standard deviationLN cells std dev±Gao, Kunshan
38IrradianceEµmol/m2/sGao, KunshanAssay
39Electron transport rate, relativerETRGao, Kunshan
40Electron transport rate, relative, standard deviationrETR std dev±Gao, Kunshan
41Electron transport rate, relativerETRGao, Kunshan
42Electron transport rate, relative, standard deviationrETR std dev±Gao, Kunshan
43SalinitySalGao, Kunshan
44Temperature, waterTemp°CGao, Kunshan
45Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmGao, KunshanBefore
46Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Gao, KunshanBefore
47pHpHGao, KunshanBefore, total scale
48pH, standard deviationpH std dev±Gao, KunshanBefore, total scale
49Alkalinity, totalATµmol/kgGao, KunshanBefore
50Alkalinity, total, standard deviationAT std dev±Gao, KunshanBefore
51Carbon, inorganic, dissolvedDICµmol/kgGao, KunshanBefore
52Carbon, inorganic, dissolved, standard deviationDIC std dev±Gao, KunshanBefore
53Bicarbonate ion[HCO3]-µmol/kgGao, KunshanBefore
54Bicarbonate ion, standard deviation[HCO3]- std dev±Gao, KunshanBefore
55Carbonate ion[CO3]2-µmol/kgGao, KunshanBefore
56Carbonate ion, standard deviation[CO3]2- std dev±Gao, KunshanBefore
57Carbon dioxideCO2µmol/kgGao, KunshanBefore
58Carbon dioxide, standard deviationCO2 std dev±Gao, KunshanBefore
59Calcite saturation stateOmega CalGao, KunshanBefore
60Calcite saturation state, standard deviationOmega Cal std dev±Gao, KunshanBefore
61Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmGao, KunshanEnd
62Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Gao, KunshanEnd
63pHpHGao, KunshanEnd, total scale
64pH, standard deviationpH std dev±Gao, KunshanEnd, total scale
65Alkalinity, totalATµmol/kgGao, KunshanEnd
66Alkalinity, total, standard deviationAT std dev±Gao, KunshanEnd
67Carbon, inorganic, dissolvedDICµmol/kgGao, KunshanEnd
68Carbon, inorganic, dissolved, standard deviationDIC std dev±Gao, KunshanEnd
69Bicarbonate ion[HCO3]-µmol/kgGao, KunshanEnd
70Bicarbonate ion, standard deviation[HCO3]- std dev±Gao, KunshanEnd
71Carbonate ion[CO3]2-µmol/kgGao, KunshanEnd
72Carbonate ion, standard deviation[CO3]2- std dev±Gao, KunshanEnd
73Carbon dioxideCO2µmol/kgGao, KunshanEnd
74Carbon dioxide, standard deviationCO2 std dev±Gao, KunshanEnd
75Calcite saturation stateOmega CalGao, KunshanEnd
76Calcite saturation state, standard deviationOmega Cal std dev±Gao, KunshanEnd
77Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
78Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Before
79Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)Before
80Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)Before
81Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Before
82Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Before
83Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Before
84Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Before
85Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)Before
86Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)End
87Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)End
88Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)End
89Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)End
90Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)End
91Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)End
92Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)End
93Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)End
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
20746 data points

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